Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16450 and IAI46_16455 are separated by 5 nucleotides IAI46_16455 and IAI46_16460 are separated by 30 nucleotides IAI46_16460 and IAI46_16465 are separated by 228 nucleotides
IAI46_16450: IAI46_16450 - glutathione S-transferase, at 3,446,226 to 3,446,843
_16450
IAI46_16455: IAI46_16455 - pyridoxamine 5'-phosphate oxidase family protein, at 3,446,849 to 3,447,769
_16455
IAI46_16460: IAI46_16460 - glycogen synthesis protein, at 3,447,800 to 3,448,015
_16460
IAI46_16465: IAI46_16465 - NADP-dependent succinate-semialdehyde dehydrogenase, at 3,448,244 to 3,449,719
_16465
Position (kb)
3447
3448
3449 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3446.842 kb on - strand at 3446.849 kb on - strand at 3446.849 kb on - strand at 3446.927 kb on + strand at 3446.927 kb on + strand at 3446.927 kb on + strand at 3446.927 kb on + strand at 3446.928 kb on - strand at 3447.147 kb on + strand, within IAI46_16455 at 3447.197 kb on - strand, within IAI46_16455 at 3447.260 kb on + strand, within IAI46_16455 at 3447.261 kb on - strand, within IAI46_16455 at 3447.262 kb on + strand, within IAI46_16455 at 3447.263 kb on - strand, within IAI46_16455 at 3447.419 kb on - strand, within IAI46_16455 at 3447.500 kb on + strand, within IAI46_16455 at 3447.500 kb on + strand, within IAI46_16455 at 3447.502 kb on + strand, within IAI46_16455 at 3447.503 kb on - strand, within IAI46_16455 at 3447.723 kb on - strand at 3447.791 kb on + strand at 3447.804 kb on - strand at 3447.850 kb on - strand, within IAI46_16460 at 3448.062 kb on + strand at 3448.062 kb on + strand at 3448.062 kb on + strand at 3448.063 kb on - strand at 3448.063 kb on - strand at 3448.063 kb on - strand at 3448.063 kb on - strand at 3448.203 kb on + strand at 3448.238 kb on + strand at 3448.301 kb on + strand at 3448.302 kb on - strand at 3448.342 kb on + strand at 3448.721 kb on - strand, within IAI46_16465 at 3448.863 kb on + strand, within IAI46_16465
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 3,446,842 - -0.1 3,446,849 - +0.8 3,446,849 - -0.3 3,446,927 + +0.6 3,446,927 + +0.1 3,446,927 + +0.5 3,446,927 + -2.3 3,446,928 - -0.0 3,447,147 + IAI46_16455 0.32 +0.4 3,447,197 - IAI46_16455 0.38 -0.9 3,447,260 + IAI46_16455 0.45 +0.7 3,447,261 - IAI46_16455 0.45 -1.1 3,447,262 + IAI46_16455 0.45 -0.1 3,447,263 - IAI46_16455 0.45 +0.1 3,447,419 - IAI46_16455 0.62 +0.9 3,447,500 + IAI46_16455 0.71 +0.2 3,447,500 + IAI46_16455 0.71 +0.5 3,447,502 + IAI46_16455 0.71 -0.3 3,447,503 - IAI46_16455 0.71 +2.0 3,447,723 - +0.2 3,447,791 + +0.0 3,447,804 - -0.0 3,447,850 - IAI46_16460 0.23 -0.3 3,448,062 + +0.9 3,448,062 + +0.3 3,448,062 + +0.8 3,448,063 - +0.4 3,448,063 - -0.5 3,448,063 - -1.3 3,448,063 - -0.6 3,448,203 + +0.8 3,448,238 + -0.3 3,448,301 + -0.0 3,448,302 - +0.6 3,448,342 + -0.5 3,448,721 - IAI46_16465 0.32 +0.3 3,448,863 + IAI46_16465 0.42 +0.4
Or see this region's nucleotide sequence