Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14600 and IAI46_14605 are separated by 21 nucleotides IAI46_14605 and IAI46_14610 are separated by 78 nucleotides IAI46_14610 and IAI46_14615 overlap by 4 nucleotides
IAI46_14600: IAI46_14600 - murein DD-endopeptidase MepM, at 3,095,460 to 3,096,782
_14600
IAI46_14605: IAI46_14605 - zinc ABC transporter substrate-binding protein ZnuA, at 3,096,804 to 3,097,769
_14605
IAI46_14610: IAI46_14610 - zinc ABC transporter ATP-binding protein ZnuC, at 3,097,848 to 3,098,606
_14610
IAI46_14615: IAI46_14615 - zinc ABC transporter permease subunit ZnuB, at 3,098,603 to 3,099,388
_14615
Position (kb)
3096
3097
3098 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3095.966 kb on - strand, within IAI46_14600 at 3095.996 kb on - strand, within IAI46_14600 at 3095.999 kb on - strand, within IAI46_14600 at 3096.289 kb on + strand, within IAI46_14600 at 3096.290 kb on - strand, within IAI46_14600 at 3096.431 kb on + strand, within IAI46_14600 at 3096.432 kb on - strand, within IAI46_14600 at 3096.432 kb on - strand, within IAI46_14600 at 3096.432 kb on - strand, within IAI46_14600 at 3096.432 kb on - strand, within IAI46_14600 at 3096.432 kb on - strand, within IAI46_14600 at 3096.432 kb on - strand, within IAI46_14600 at 3096.432 kb on - strand, within IAI46_14600 at 3096.432 kb on - strand, within IAI46_14600 at 3096.432 kb on - strand, within IAI46_14600 at 3096.436 kb on - strand, within IAI46_14600 at 3096.487 kb on + strand, within IAI46_14600 at 3096.488 kb on - strand, within IAI46_14600 at 3096.488 kb on - strand, within IAI46_14600 at 3096.488 kb on - strand, within IAI46_14600 at 3096.647 kb on + strand, within IAI46_14600 at 3096.695 kb on + strand at 3096.696 kb on - strand at 3096.696 kb on - strand at 3096.696 kb on - strand at 3096.772 kb on - strand at 3096.799 kb on - strand at 3097.017 kb on + strand, within IAI46_14605 at 3097.018 kb on - strand, within IAI46_14605 at 3097.018 kb on - strand, within IAI46_14605 at 3097.097 kb on - strand, within IAI46_14605 at 3097.102 kb on + strand, within IAI46_14605 at 3097.183 kb on - strand, within IAI46_14605 at 3097.224 kb on - strand, within IAI46_14605 at 3097.236 kb on - strand, within IAI46_14605 at 3097.236 kb on - strand, within IAI46_14605 at 3097.310 kb on + strand, within IAI46_14605 at 3097.311 kb on - strand, within IAI46_14605 at 3097.311 kb on - strand, within IAI46_14605 at 3097.311 kb on - strand, within IAI46_14605 at 3097.311 kb on - strand, within IAI46_14605 at 3097.771 kb on - strand at 3097.808 kb on - strand at 3097.898 kb on + strand at 3097.899 kb on - strand at 3097.899 kb on - strand at 3098.025 kb on - strand, within IAI46_14610 at 3098.147 kb on + strand, within IAI46_14610 at 3098.733 kb on + strand, within IAI46_14615 at 3098.733 kb on + strand, within IAI46_14615
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 3,095,966 - IAI46_14600 0.38 +0.5 3,095,996 - IAI46_14600 0.41 +0.5 3,095,999 - IAI46_14600 0.41 +1.1 3,096,289 + IAI46_14600 0.63 +0.4 3,096,290 - IAI46_14600 0.63 +0.6 3,096,431 + IAI46_14600 0.73 +1.4 3,096,432 - IAI46_14600 0.73 +1.4 3,096,432 - IAI46_14600 0.73 +0.9 3,096,432 - IAI46_14600 0.73 +0.4 3,096,432 - IAI46_14600 0.73 +0.5 3,096,432 - IAI46_14600 0.73 +1.0 3,096,432 - IAI46_14600 0.73 +0.5 3,096,432 - IAI46_14600 0.73 +1.1 3,096,432 - IAI46_14600 0.73 +1.1 3,096,432 - IAI46_14600 0.73 +1.3 3,096,436 - IAI46_14600 0.74 -0.4 3,096,487 + IAI46_14600 0.78 +1.9 3,096,488 - IAI46_14600 0.78 +0.8 3,096,488 - IAI46_14600 0.78 +1.1 3,096,488 - IAI46_14600 0.78 +1.2 3,096,647 + IAI46_14600 0.90 +0.3 3,096,695 + +0.5 3,096,696 - +1.6 3,096,696 - +0.4 3,096,696 - +1.5 3,096,772 - -0.4 3,096,799 - -0.2 3,097,017 + IAI46_14605 0.22 +0.4 3,097,018 - IAI46_14605 0.22 +1.4 3,097,018 - IAI46_14605 0.22 +0.1 3,097,097 - IAI46_14605 0.30 +0.4 3,097,102 + IAI46_14605 0.31 -0.4 3,097,183 - IAI46_14605 0.39 +0.2 3,097,224 - IAI46_14605 0.43 +1.1 3,097,236 - IAI46_14605 0.45 -1.9 3,097,236 - IAI46_14605 0.45 +0.2 3,097,310 + IAI46_14605 0.52 -0.7 3,097,311 - IAI46_14605 0.52 +0.6 3,097,311 - IAI46_14605 0.52 -0.1 3,097,311 - IAI46_14605 0.52 -1.6 3,097,311 - IAI46_14605 0.52 +0.5 3,097,771 - +1.1 3,097,808 - +0.7 3,097,898 + -0.1 3,097,899 - +0.1 3,097,899 - +0.1 3,098,025 - IAI46_14610 0.23 +1.4 3,098,147 + IAI46_14610 0.39 -0.9 3,098,733 + IAI46_14615 0.17 +0.6 3,098,733 + IAI46_14615 0.17 +0.4
Or see this region's nucleotide sequence