Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13305 and IAI46_13310 are separated by 66 nucleotides IAI46_13310 and IAI46_13315 are separated by 347 nucleotides IAI46_13315 and IAI46_13320 are separated by 302 nucleotides
IAI46_13305: IAI46_13305 - two-component system sensor histidine kinase RstB, at 2,837,627 to 2,838,931
_13305
IAI46_13310: IAI46_13310 - carboxypeptidase M32, at 2,838,998 to 2,840,494
_13310
IAI46_13315: IAI46_13315 - acid resistance repetitive basic protein Asr, at 2,840,842 to 2,841,147
_13315
IAI46_13320: IAI46_13320 - serine protease, at 2,841,450 to 2,842,271
_13320
Position (kb)
2838
2839
2840
2841 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2838.014 kb on + strand, within IAI46_13305 at 2838.014 kb on + strand, within IAI46_13305 at 2838.014 kb on + strand, within IAI46_13305 at 2838.015 kb on - strand, within IAI46_13305 at 2838.400 kb on + strand, within IAI46_13305 at 2838.415 kb on + strand, within IAI46_13305 at 2838.454 kb on + strand, within IAI46_13305 at 2838.609 kb on + strand, within IAI46_13305 at 2838.681 kb on + strand, within IAI46_13305 at 2838.688 kb on - strand, within IAI46_13305 at 2838.842 kb on + strand at 2838.842 kb on + strand at 2838.981 kb on + strand at 2839.012 kb on + strand at 2839.013 kb on - strand at 2839.013 kb on - strand at 2839.161 kb on + strand, within IAI46_13310 at 2839.755 kb on - strand, within IAI46_13310 at 2840.000 kb on - strand, within IAI46_13310 at 2840.026 kb on - strand, within IAI46_13310 at 2840.261 kb on + strand, within IAI46_13310 at 2840.261 kb on + strand, within IAI46_13310 at 2840.280 kb on - strand, within IAI46_13310 at 2840.492 kb on + strand at 2840.493 kb on - strand at 2840.577 kb on + strand at 2840.578 kb on - strand at 2840.618 kb on + strand at 2840.619 kb on - strand at 2840.622 kb on + strand at 2840.633 kb on + strand at 2840.656 kb on - strand at 2840.656 kb on - strand at 2840.723 kb on + strand at 2840.723 kb on + strand at 2840.723 kb on + strand at 2840.724 kb on - strand at 2840.724 kb on - strand at 2840.724 kb on - strand at 2840.728 kb on + strand at 2840.780 kb on - strand at 2841.052 kb on - strand, within IAI46_13315 at 2841.145 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,838,014 + IAI46_13305 0.30 +0.4 2,838,014 + IAI46_13305 0.30 +0.1 2,838,014 + IAI46_13305 0.30 +0.4 2,838,015 - IAI46_13305 0.30 -0.6 2,838,400 + IAI46_13305 0.59 -0.2 2,838,415 + IAI46_13305 0.60 -1.2 2,838,454 + IAI46_13305 0.63 +0.5 2,838,609 + IAI46_13305 0.75 +1.1 2,838,681 + IAI46_13305 0.81 +0.0 2,838,688 - IAI46_13305 0.81 -1.9 2,838,842 + +1.2 2,838,842 + -0.6 2,838,981 + -0.3 2,839,012 + +0.2 2,839,013 - -0.7 2,839,013 - -0.1 2,839,161 + IAI46_13310 0.11 -0.7 2,839,755 - IAI46_13310 0.51 -0.8 2,840,000 - IAI46_13310 0.67 -0.2 2,840,026 - IAI46_13310 0.69 +0.1 2,840,261 + IAI46_13310 0.84 +1.8 2,840,261 + IAI46_13310 0.84 +0.2 2,840,280 - IAI46_13310 0.86 -0.1 2,840,492 + -0.5 2,840,493 - +0.2 2,840,577 + +1.9 2,840,578 - -0.4 2,840,618 + +0.3 2,840,619 - -2.1 2,840,622 + +0.8 2,840,633 + +1.4 2,840,656 - -0.6 2,840,656 - -0.1 2,840,723 + -0.4 2,840,723 + +0.0 2,840,723 + +2.2 2,840,724 - -0.9 2,840,724 - +0.3 2,840,724 - +0.2 2,840,728 + -1.0 2,840,780 - +0.4 2,841,052 - IAI46_13315 0.69 +0.2 2,841,145 + -0.8
Or see this region's nucleotide sequence