Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11605 and IAI46_11610 are separated by 2 nucleotides IAI46_11610 and IAI46_11615 are separated by 204 nucleotides
IAI46_11605: IAI46_11605 - Mal regulon transcriptional regulator MalI, at 2,448,335 to 2,449,366
_11605
IAI46_11610: IAI46_11610 - LysR family transcriptional regulator, at 2,449,369 to 2,450,244
_11610
IAI46_11615: IAI46_11615 - beta-lactamase, at 2,450,449 to 2,451,585
_11615
Position (kb)
2449
2450
2451 Strain fitness (log2 ratio)
-2
-1
0
1 at 2448.444 kb on + strand, within IAI46_11605 at 2448.480 kb on - strand, within IAI46_11605 at 2448.488 kb on - strand, within IAI46_11605 at 2448.550 kb on + strand, within IAI46_11605 at 2448.551 kb on - strand, within IAI46_11605 at 2448.551 kb on - strand, within IAI46_11605 at 2448.830 kb on - strand, within IAI46_11605 at 2448.958 kb on - strand, within IAI46_11605 at 2448.963 kb on - strand, within IAI46_11605 at 2449.106 kb on + strand, within IAI46_11605 at 2449.119 kb on + strand, within IAI46_11605 at 2449.156 kb on + strand, within IAI46_11605 at 2449.157 kb on - strand, within IAI46_11605 at 2449.157 kb on - strand, within IAI46_11605 at 2449.160 kb on + strand, within IAI46_11605 at 2449.160 kb on + strand, within IAI46_11605 at 2449.287 kb on + strand at 2449.287 kb on + strand at 2449.464 kb on - strand, within IAI46_11610 at 2449.695 kb on - strand, within IAI46_11610 at 2449.700 kb on - strand, within IAI46_11610 at 2449.774 kb on - strand, within IAI46_11610 at 2449.774 kb on - strand, within IAI46_11610 at 2449.774 kb on - strand, within IAI46_11610 at 2449.855 kb on - strand, within IAI46_11610 at 2449.941 kb on + strand, within IAI46_11610 at 2450.286 kb on + strand at 2450.301 kb on + strand at 2450.301 kb on + strand at 2450.305 kb on + strand at 2450.306 kb on - strand at 2450.770 kb on + strand, within IAI46_11615 at 2450.893 kb on + strand, within IAI46_11615 at 2450.894 kb on - strand, within IAI46_11615 at 2450.896 kb on + strand, within IAI46_11615 at 2450.897 kb on - strand, within IAI46_11615 at 2450.961 kb on + strand, within IAI46_11615 at 2450.962 kb on - strand, within IAI46_11615 at 2450.962 kb on - strand, within IAI46_11615 at 2451.055 kb on + strand, within IAI46_11615 at 2451.055 kb on + strand, within IAI46_11615 at 2451.055 kb on + strand, within IAI46_11615 at 2451.056 kb on - strand, within IAI46_11615 at 2451.056 kb on - strand, within IAI46_11615 at 2451.057 kb on + strand, within IAI46_11615 at 2451.058 kb on - strand, within IAI46_11615 at 2451.106 kb on - strand, within IAI46_11615
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,448,444 + IAI46_11605 0.11 +0.8 2,448,480 - IAI46_11605 0.14 -1.3 2,448,488 - IAI46_11605 0.15 -2.1 2,448,550 + IAI46_11605 0.21 -0.3 2,448,551 - IAI46_11605 0.21 -2.2 2,448,551 - IAI46_11605 0.21 -0.4 2,448,830 - IAI46_11605 0.48 +0.4 2,448,958 - IAI46_11605 0.60 +0.0 2,448,963 - IAI46_11605 0.61 -0.2 2,449,106 + IAI46_11605 0.75 +0.4 2,449,119 + IAI46_11605 0.76 -0.4 2,449,156 + IAI46_11605 0.80 -0.2 2,449,157 - IAI46_11605 0.80 +0.3 2,449,157 - IAI46_11605 0.80 -0.7 2,449,160 + IAI46_11605 0.80 +0.6 2,449,160 + IAI46_11605 0.80 -0.5 2,449,287 + +0.4 2,449,287 + -0.4 2,449,464 - IAI46_11610 0.11 +0.3 2,449,695 - IAI46_11610 0.37 -0.5 2,449,700 - IAI46_11610 0.38 +0.7 2,449,774 - IAI46_11610 0.46 +1.4 2,449,774 - IAI46_11610 0.46 +1.1 2,449,774 - IAI46_11610 0.46 -0.5 2,449,855 - IAI46_11610 0.55 +0.1 2,449,941 + IAI46_11610 0.65 +0.3 2,450,286 + +1.5 2,450,301 + +0.4 2,450,301 + +0.3 2,450,305 + -0.6 2,450,306 - +0.1 2,450,770 + IAI46_11615 0.28 +0.5 2,450,893 + IAI46_11615 0.39 +0.4 2,450,894 - IAI46_11615 0.39 +1.5 2,450,896 + IAI46_11615 0.39 -2.4 2,450,897 - IAI46_11615 0.39 -0.6 2,450,961 + IAI46_11615 0.45 +0.3 2,450,962 - IAI46_11615 0.45 -0.6 2,450,962 - IAI46_11615 0.45 +1.1 2,451,055 + IAI46_11615 0.53 +0.7 2,451,055 + IAI46_11615 0.53 -0.2 2,451,055 + IAI46_11615 0.53 +0.2 2,451,056 - IAI46_11615 0.53 -1.5 2,451,056 - IAI46_11615 0.53 +0.5 2,451,057 + IAI46_11615 0.53 +0.6 2,451,058 - IAI46_11615 0.54 -0.3 2,451,106 - IAI46_11615 0.58 -0.7
Or see this region's nucleotide sequence