Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11450 and IAI46_11455 are separated by 606 nucleotides IAI46_11455 and IAI46_11460 overlap by 1 nucleotides IAI46_11460 and IAI46_11465 overlap by 4 nucleotides
IAI46_11450: IAI46_11450 - dipeptide/tripeptide permease DtpA, at 2,415,667 to 2,417,187
_11450
IAI46_11455: IAI46_11455 - endonuclease III, at 2,417,794 to 2,418,435
_11455
IAI46_11460: IAI46_11460 - electron transport complex subunit E, at 2,418,435 to 2,419,133
_11460
IAI46_11465: IAI46_11465 - electron transport complex subunit RsxG, at 2,419,130 to 2,419,759
_11465
Position (kb)
2417
2418
2419 Strain fitness (log2 ratio)
-2
-1
0
1 at 2416.935 kb on + strand, within IAI46_11450 at 2416.971 kb on - strand, within IAI46_11450 at 2417.043 kb on - strand at 2417.043 kb on - strand at 2417.139 kb on + strand at 2417.191 kb on + strand at 2417.192 kb on - strand at 2417.274 kb on + strand at 2417.275 kb on - strand at 2417.344 kb on - strand at 2417.347 kb on + strand at 2417.347 kb on + strand at 2417.348 kb on - strand at 2417.504 kb on + strand at 2417.505 kb on - strand at 2417.505 kb on - strand at 2418.021 kb on + strand, within IAI46_11455 at 2418.055 kb on - strand, within IAI46_11455 at 2418.145 kb on + strand, within IAI46_11455 at 2418.213 kb on - strand, within IAI46_11455 at 2418.292 kb on - strand, within IAI46_11455 at 2418.430 kb on - strand at 2418.622 kb on - strand, within IAI46_11460 at 2418.712 kb on - strand, within IAI46_11460 at 2418.831 kb on - strand, within IAI46_11460 at 2418.850 kb on + strand, within IAI46_11460 at 2418.919 kb on + strand, within IAI46_11460 at 2418.919 kb on + strand, within IAI46_11460 at 2418.920 kb on - strand, within IAI46_11460 at 2418.920 kb on - strand, within IAI46_11460 at 2418.930 kb on - strand, within IAI46_11460 at 2418.930 kb on - strand, within IAI46_11460 at 2419.155 kb on - strand at 2419.160 kb on - strand at 2419.160 kb on - strand at 2419.160 kb on - strand at 2419.188 kb on + strand at 2419.188 kb on + strand at 2419.189 kb on - strand at 2419.189 kb on - strand at 2419.189 kb on - strand at 2419.292 kb on - strand, within IAI46_11465 at 2419.346 kb on - strand, within IAI46_11465
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,416,935 + IAI46_11450 0.83 -1.0 2,416,971 - IAI46_11450 0.86 -0.8 2,417,043 - +0.4 2,417,043 - -0.8 2,417,139 + +0.6 2,417,191 + +0.9 2,417,192 - -0.5 2,417,274 + -2.1 2,417,275 - -0.8 2,417,344 - +0.4 2,417,347 + +0.8 2,417,347 + +0.8 2,417,348 - +0.7 2,417,504 + +0.3 2,417,505 - +1.3 2,417,505 - +0.9 2,418,021 + IAI46_11455 0.35 -0.5 2,418,055 - IAI46_11455 0.41 -0.3 2,418,145 + IAI46_11455 0.55 +0.9 2,418,213 - IAI46_11455 0.65 -0.4 2,418,292 - IAI46_11455 0.78 +0.2 2,418,430 - +1.3 2,418,622 - IAI46_11460 0.27 -1.0 2,418,712 - IAI46_11460 0.40 +1.2 2,418,831 - IAI46_11460 0.57 +1.1 2,418,850 + IAI46_11460 0.59 -0.9 2,418,919 + IAI46_11460 0.69 -0.7 2,418,919 + IAI46_11460 0.69 +0.3 2,418,920 - IAI46_11460 0.69 +0.1 2,418,920 - IAI46_11460 0.69 +0.4 2,418,930 - IAI46_11460 0.71 -0.7 2,418,930 - IAI46_11460 0.71 +1.5 2,419,155 - -0.4 2,419,160 - -0.1 2,419,160 - -0.9 2,419,160 - +0.5 2,419,188 + -0.0 2,419,188 + -0.5 2,419,189 - +0.6 2,419,189 - +0.8 2,419,189 - +1.3 2,419,292 - IAI46_11465 0.26 +0.7 2,419,346 - IAI46_11465 0.34 +1.4
Or see this region's nucleotide sequence