Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09140 and IAI46_09145 are separated by 44 nucleotides IAI46_09145 and IAI46_09150 are separated by 57 nucleotides
IAI46_09140: IAI46_09140 - APC family permease, at 1,958,446 to 1,960,011
_09140
IAI46_09145: IAI46_09145 - aldehyde dehydrogenase (NADP(+)), at 1,960,056 to 1,961,666
_09145
IAI46_09150: IAI46_09150 - dihydrodipicolinate synthase family protein, at 1,961,724 to 1,962,644
_09150
Position (kb)
1960
1961
1962 Strain fitness (log2 ratio)
-1
0
1 at 1959.060 kb on - strand, within IAI46_09140 at 1959.060 kb on - strand, within IAI46_09140 at 1959.084 kb on + strand, within IAI46_09140 at 1959.086 kb on + strand, within IAI46_09140 at 1959.087 kb on - strand, within IAI46_09140 at 1959.171 kb on + strand, within IAI46_09140 at 1959.388 kb on - strand, within IAI46_09140 at 1959.563 kb on + strand, within IAI46_09140 at 1959.563 kb on + strand, within IAI46_09140 at 1959.566 kb on + strand, within IAI46_09140 at 1959.746 kb on + strand, within IAI46_09140 at 1959.747 kb on - strand, within IAI46_09140 at 1959.828 kb on - strand, within IAI46_09140 at 1959.875 kb on + strand at 1959.979 kb on - strand at 1959.979 kb on - strand at 1960.032 kb on - strand at 1960.227 kb on - strand, within IAI46_09145 at 1960.227 kb on - strand, within IAI46_09145 at 1960.552 kb on - strand, within IAI46_09145 at 1960.552 kb on - strand, within IAI46_09145 at 1961.483 kb on - strand, within IAI46_09145 at 1961.630 kb on + strand at 1961.631 kb on - strand at 1961.865 kb on + strand, within IAI46_09150 at 1961.930 kb on - strand, within IAI46_09150 at 1962.005 kb on + strand, within IAI46_09150 at 1962.159 kb on - strand, within IAI46_09150 at 1962.159 kb on - strand, within IAI46_09150 at 1962.209 kb on + strand, within IAI46_09150 at 1962.210 kb on - strand, within IAI46_09150 at 1962.230 kb on - strand, within IAI46_09150 at 1962.304 kb on + strand, within IAI46_09150 at 1962.305 kb on - strand, within IAI46_09150 at 1962.626 kb on + strand at 1962.644 kb on + strand at 1962.645 kb on - strand at 1962.645 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 1,959,060 - IAI46_09140 0.39 -0.1 1,959,060 - IAI46_09140 0.39 -0.3 1,959,084 + IAI46_09140 0.41 +0.2 1,959,086 + IAI46_09140 0.41 +1.2 1,959,087 - IAI46_09140 0.41 +0.1 1,959,171 + IAI46_09140 0.46 +0.3 1,959,388 - IAI46_09140 0.60 -1.7 1,959,563 + IAI46_09140 0.71 +0.7 1,959,563 + IAI46_09140 0.71 -1.5 1,959,566 + IAI46_09140 0.72 -0.3 1,959,746 + IAI46_09140 0.83 +0.1 1,959,747 - IAI46_09140 0.83 +0.5 1,959,828 - IAI46_09140 0.88 +0.7 1,959,875 + -0.0 1,959,979 - -1.6 1,959,979 - +0.6 1,960,032 - -0.9 1,960,227 - IAI46_09145 0.11 +1.2 1,960,227 - IAI46_09145 0.11 -0.1 1,960,552 - IAI46_09145 0.31 -0.5 1,960,552 - IAI46_09145 0.31 +0.1 1,961,483 - IAI46_09145 0.89 -0.4 1,961,630 + +0.7 1,961,631 - +1.3 1,961,865 + IAI46_09150 0.15 -0.2 1,961,930 - IAI46_09150 0.22 +0.3 1,962,005 + IAI46_09150 0.31 +0.5 1,962,159 - IAI46_09150 0.47 -0.9 1,962,159 - IAI46_09150 0.47 -0.2 1,962,209 + IAI46_09150 0.53 +0.7 1,962,210 - IAI46_09150 0.53 -0.0 1,962,230 - IAI46_09150 0.55 +0.7 1,962,304 + IAI46_09150 0.63 -0.4 1,962,305 - IAI46_09150 0.63 +0.8 1,962,626 + +1.7 1,962,644 + +0.2 1,962,645 - +1.1 1,962,645 - +0.1
Or see this region's nucleotide sequence