Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04335 and IAI46_04340 are separated by 245 nucleotides IAI46_04340 and IAI46_04345 are separated by 97 nucleotides IAI46_04345 and IAI46_04350 overlap by 69 nucleotides IAI46_04350 and IAI46_04355 are separated by 255 nucleotides
IAI46_04335: IAI46_04335 - acyl-CoA dehydrogenase, at 928,709 to 931,165
_04335
IAI46_04340: IAI46_04340 - D-sedoheptulose 7-phosphate isomerase, at 931,411 to 931,992
_04340
IAI46_04345: IAI46_04345 - class II glutamine amidotransferase, at 932,090 to 932,896
_04345
IAI46_04350: IAI46_04350 - murein L,D-transpeptidase, at 932,828 to 933,598
_04350
IAI46_04355: IAI46_04355 - hypothetical protein, at 933,854 to 934,171
_04355
Position (kb) 932
933 Strain fitness (log2 ratio) -2
-1
0
1
2 at 931.113 kb on + strand at 931.114 kb on - strand at 931.150 kb on + strand at 931.150 kb on + strand at 931.150 kb on + strand at 931.150 kb on + strand at 931.151 kb on - strand at 931.151 kb on - strand at 931.153 kb on + strand at 931.154 kb on - strand at 931.154 kb on - strand at 931.165 kb on + strand at 931.165 kb on + strand at 931.165 kb on + strand at 931.165 kb on + strand at 931.165 kb on + strand at 931.166 kb on - strand at 931.166 kb on - strand at 931.206 kb on + strand at 931.206 kb on + strand at 931.206 kb on + strand at 931.207 kb on - strand at 931.207 kb on - strand at 931.207 kb on - strand at 931.207 kb on - strand at 931.211 kb on - strand at 931.211 kb on - strand at 931.213 kb on + strand at 931.214 kb on - strand at 931.262 kb on + strand at 931.269 kb on + strand at 932.023 kb on + strand at 932.024 kb on - strand at 932.024 kb on - strand at 932.024 kb on - strand at 932.122 kb on - strand at 932.132 kb on - strand at 932.185 kb on + strand, within IAI46_04345 at 932.185 kb on + strand, within IAI46_04345 at 932.186 kb on - strand, within IAI46_04345 at 932.203 kb on + strand, within IAI46_04345 at 932.210 kb on + strand, within IAI46_04345 at 932.210 kb on + strand, within IAI46_04345 at 932.210 kb on + strand, within IAI46_04345 at 932.210 kb on + strand, within IAI46_04345 at 932.210 kb on + strand, within IAI46_04345 at 932.210 kb on + strand, within IAI46_04345 at 932.211 kb on - strand, within IAI46_04345 at 932.236 kb on + strand, within IAI46_04345 at 932.236 kb on + strand, within IAI46_04345 at 932.360 kb on - strand, within IAI46_04345 at 932.392 kb on + strand, within IAI46_04345 at 932.392 kb on + strand, within IAI46_04345 at 932.402 kb on + strand, within IAI46_04345 at 932.402 kb on + strand, within IAI46_04345 at 932.483 kb on + strand, within IAI46_04345 at 932.523 kb on - strand, within IAI46_04345 at 932.530 kb on + strand, within IAI46_04345 at 932.562 kb on - strand, within IAI46_04345 at 932.564 kb on - strand, within IAI46_04345 at 932.642 kb on + strand, within IAI46_04345 at 932.643 kb on - strand, within IAI46_04345 at 932.643 kb on - strand, within IAI46_04345 at 932.660 kb on + strand, within IAI46_04345 at 932.696 kb on - strand, within IAI46_04345 at 932.746 kb on + strand, within IAI46_04345 at 932.746 kb on + strand, within IAI46_04345 at 932.746 kb on + strand, within IAI46_04345 at 932.746 kb on + strand, within IAI46_04345 at 932.747 kb on - strand, within IAI46_04345 at 932.747 kb on - strand, within IAI46_04345 at 932.829 kb on + strand at 932.901 kb on + strand at 932.901 kb on + strand at 932.902 kb on - strand at 932.946 kb on + strand, within IAI46_04350 at 932.947 kb on - strand, within IAI46_04350 at 932.947 kb on - strand, within IAI46_04350 at 932.947 kb on - strand, within IAI46_04350 at 932.947 kb on - strand, within IAI46_04350 at 932.997 kb on + strand, within IAI46_04350 at 932.997 kb on + strand, within IAI46_04350 at 932.997 kb on + strand, within IAI46_04350 at 932.998 kb on - strand, within IAI46_04350 at 932.998 kb on - strand, within IAI46_04350 at 932.998 kb on - strand, within IAI46_04350 at 932.998 kb on - strand, within IAI46_04350 at 932.998 kb on - strand, within IAI46_04350 at 933.003 kb on + strand, within IAI46_04350 at 933.037 kb on - strand, within IAI46_04350 at 933.037 kb on - strand, within IAI46_04350 at 933.037 kb on - strand, within IAI46_04350 at 933.037 kb on - strand, within IAI46_04350 at 933.087 kb on + strand, within IAI46_04350 at 933.088 kb on - strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.091 kb on + strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.092 kb on - strand, within IAI46_04350 at 933.097 kb on + strand, within IAI46_04350 at 933.097 kb on + strand, within IAI46_04350 at 933.117 kb on + strand, within IAI46_04350 at 933.117 kb on + strand, within IAI46_04350 at 933.139 kb on - strand, within IAI46_04350 at 933.144 kb on + strand, within IAI46_04350 at 933.158 kb on - strand, within IAI46_04350 at 933.158 kb on - strand, within IAI46_04350 at 933.158 kb on - strand, within IAI46_04350 at 933.158 kb on - strand, within IAI46_04350 at 933.159 kb on + strand, within IAI46_04350 at 933.159 kb on + strand, within IAI46_04350 at 933.159 kb on + strand, within IAI46_04350 at 933.159 kb on + strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.160 kb on - strand, within IAI46_04350 at 933.178 kb on - strand, within IAI46_04350 at 933.216 kb on + strand, within IAI46_04350 at 933.217 kb on - strand, within IAI46_04350 at 933.229 kb on - strand, within IAI46_04350 at 933.242 kb on - strand, within IAI46_04350 at 933.269 kb on + strand, within IAI46_04350 at 933.269 kb on + strand, within IAI46_04350 at 933.282 kb on + strand, within IAI46_04350 at 933.282 kb on + strand, within IAI46_04350 at 933.282 kb on + strand, within IAI46_04350 at 933.282 kb on + strand, within IAI46_04350 at 933.282 kb on + strand, within IAI46_04350 at 933.283 kb on - strand, within IAI46_04350 at 933.286 kb on + strand, within IAI46_04350 at 933.286 kb on + strand, within IAI46_04350 at 933.286 kb on + strand, within IAI46_04350 at 933.287 kb on - strand, within IAI46_04350 at 933.287 kb on - strand, within IAI46_04350 at 933.319 kb on + strand, within IAI46_04350 at 933.320 kb on - strand, within IAI46_04350 at 933.436 kb on - strand, within IAI46_04350 at 933.436 kb on - strand, within IAI46_04350 at 933.436 kb on - strand, within IAI46_04350 at 933.436 kb on - strand, within IAI46_04350 at 933.436 kb on - strand, within IAI46_04350 at 933.465 kb on - strand, within IAI46_04350 at 933.472 kb on + strand, within IAI46_04350 at 933.473 kb on - strand, within IAI46_04350 at 933.474 kb on + strand, within IAI46_04350 at 933.475 kb on - strand, within IAI46_04350 at 933.491 kb on + strand, within IAI46_04350 at 933.503 kb on - strand, within IAI46_04350 at 933.600 kb on - strand at 933.602 kb on + strand at 933.602 kb on + strand at 933.613 kb on - strand at 933.613 kb on - strand at 933.613 kb on - strand at 933.613 kb on - strand at 933.614 kb on + strand at 933.615 kb on - strand at 933.618 kb on + strand at 933.618 kb on + strand at 933.618 kb on + strand at 933.618 kb on + strand at 933.635 kb on + strand at 933.635 kb on + strand at 933.660 kb on + strand at 933.660 kb on + strand at 933.669 kb on - strand at 933.677 kb on - strand at 933.693 kb on - strand at 933.710 kb on + strand at 933.711 kb on - strand at 933.727 kb on + strand at 933.729 kb on + strand at 933.790 kb on + strand at 933.807 kb on - strand at 933.866 kb on - strand at 933.883 kb on + strand at 933.894 kb on + strand, within IAI46_04355 at 933.895 kb on - strand, within IAI46_04355
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 931,113 + +0.4 931,114 - +0.1 931,150 + -0.1 931,150 + -0.0 931,150 + -0.4 931,150 + +0.1 931,151 - +0.0 931,151 - +1.1 931,153 + +1.5 931,154 - -1.1 931,154 - +0.2 931,165 + +1.8 931,165 + -1.3 931,165 + +0.2 931,165 + +0.0 931,165 + -0.5 931,166 - +0.1 931,166 - +0.5 931,206 + +0.5 931,206 + -0.1 931,206 + +0.6 931,207 - +2.0 931,207 - -0.5 931,207 - +0.4 931,207 - -0.1 931,211 - -0.2 931,211 - -0.2 931,213 + -0.3 931,214 - +0.2 931,262 + +0.2 931,269 + +0.7 932,023 + +0.0 932,024 - +0.0 932,024 - +0.2 932,024 - -0.5 932,122 - -0.2 932,132 - -0.4 932,185 + IAI46_04345 0.12 +0.4 932,185 + IAI46_04345 0.12 +0.2 932,186 - IAI46_04345 0.12 +0.2 932,203 + IAI46_04345 0.14 +1.0 932,210 + IAI46_04345 0.15 -0.0 932,210 + IAI46_04345 0.15 -0.0 932,210 + IAI46_04345 0.15 -0.0 932,210 + IAI46_04345 0.15 -0.1 932,210 + IAI46_04345 0.15 -0.1 932,210 + IAI46_04345 0.15 -0.5 932,211 - IAI46_04345 0.15 -1.1 932,236 + IAI46_04345 0.18 +1.0 932,236 + IAI46_04345 0.18 +0.4 932,360 - IAI46_04345 0.33 +0.4 932,392 + IAI46_04345 0.37 +0.0 932,392 + IAI46_04345 0.37 -0.1 932,402 + IAI46_04345 0.39 +0.1 932,402 + IAI46_04345 0.39 -0.2 932,483 + IAI46_04345 0.49 -0.6 932,523 - IAI46_04345 0.54 -2.2 932,530 + IAI46_04345 0.55 -0.3 932,562 - IAI46_04345 0.58 +1.9 932,564 - IAI46_04345 0.59 +1.2 932,642 + IAI46_04345 0.68 +0.4 932,643 - IAI46_04345 0.69 +1.2 932,643 - IAI46_04345 0.69 -0.4 932,660 + IAI46_04345 0.71 -0.7 932,696 - IAI46_04345 0.75 +1.0 932,746 + IAI46_04345 0.81 -1.3 932,746 + IAI46_04345 0.81 +0.9 932,746 + IAI46_04345 0.81 +0.4 932,746 + IAI46_04345 0.81 +0.2 932,747 - IAI46_04345 0.81 -0.4 932,747 - IAI46_04345 0.81 +0.0 932,829 + -0.3 932,901 + -0.0 932,901 + +0.4 932,902 - +0.1 932,946 + IAI46_04350 0.15 +0.4 932,947 - IAI46_04350 0.15 -0.4 932,947 - IAI46_04350 0.15 -0.3 932,947 - IAI46_04350 0.15 -1.3 932,947 - IAI46_04350 0.15 -0.3 932,997 + IAI46_04350 0.22 -0.7 932,997 + IAI46_04350 0.22 -0.4 932,997 + IAI46_04350 0.22 +0.4 932,998 - IAI46_04350 0.22 -0.5 932,998 - IAI46_04350 0.22 +0.3 932,998 - IAI46_04350 0.22 +0.8 932,998 - IAI46_04350 0.22 +0.3 932,998 - IAI46_04350 0.22 +0.1 933,003 + IAI46_04350 0.23 -0.0 933,037 - IAI46_04350 0.27 -0.3 933,037 - IAI46_04350 0.27 +1.0 933,037 - IAI46_04350 0.27 -0.2 933,037 - IAI46_04350 0.27 -0.3 933,087 + IAI46_04350 0.34 +0.7 933,088 - IAI46_04350 0.34 -1.1 933,091 + IAI46_04350 0.34 -0.2 933,091 + IAI46_04350 0.34 -0.0 933,091 + IAI46_04350 0.34 -0.1 933,091 + IAI46_04350 0.34 -0.2 933,091 + IAI46_04350 0.34 +0.4 933,091 + IAI46_04350 0.34 -0.9 933,092 - IAI46_04350 0.34 +0.3 933,092 - IAI46_04350 0.34 -2.2 933,092 - IAI46_04350 0.34 -2.1 933,092 - IAI46_04350 0.34 +0.5 933,092 - IAI46_04350 0.34 -0.0 933,092 - IAI46_04350 0.34 +0.6 933,092 - IAI46_04350 0.34 +0.2 933,092 - IAI46_04350 0.34 +0.1 933,092 - IAI46_04350 0.34 +0.3 933,092 - IAI46_04350 0.34 -0.4 933,097 + IAI46_04350 0.35 -1.0 933,097 + IAI46_04350 0.35 +0.5 933,117 + IAI46_04350 0.37 +0.1 933,117 + IAI46_04350 0.37 +0.1 933,139 - IAI46_04350 0.40 -1.0 933,144 + IAI46_04350 0.41 +0.7 933,158 - IAI46_04350 0.43 +0.2 933,158 - IAI46_04350 0.43 -0.2 933,158 - IAI46_04350 0.43 +0.8 933,158 - IAI46_04350 0.43 +0.9 933,159 + IAI46_04350 0.43 -0.5 933,159 + IAI46_04350 0.43 +0.3 933,159 + IAI46_04350 0.43 -0.2 933,159 + IAI46_04350 0.43 +0.6 933,160 - IAI46_04350 0.43 +0.0 933,160 - IAI46_04350 0.43 -0.0 933,160 - IAI46_04350 0.43 +0.0 933,160 - IAI46_04350 0.43 -0.3 933,160 - IAI46_04350 0.43 +0.3 933,160 - IAI46_04350 0.43 -1.0 933,160 - IAI46_04350 0.43 +0.5 933,160 - IAI46_04350 0.43 +0.5 933,178 - IAI46_04350 0.45 -0.1 933,216 + IAI46_04350 0.50 -0.2 933,217 - IAI46_04350 0.50 +0.9 933,229 - IAI46_04350 0.52 -0.1 933,242 - IAI46_04350 0.54 +2.0 933,269 + IAI46_04350 0.57 +0.2 933,269 + IAI46_04350 0.57 +0.0 933,282 + IAI46_04350 0.59 -0.6 933,282 + IAI46_04350 0.59 -0.6 933,282 + IAI46_04350 0.59 -0.4 933,282 + IAI46_04350 0.59 +0.1 933,282 + IAI46_04350 0.59 +0.3 933,283 - IAI46_04350 0.59 +0.7 933,286 + IAI46_04350 0.59 -2.1 933,286 + IAI46_04350 0.59 -0.6 933,286 + IAI46_04350 0.59 +0.4 933,287 - IAI46_04350 0.60 +1.3 933,287 - IAI46_04350 0.60 +0.4 933,319 + IAI46_04350 0.64 +0.1 933,320 - IAI46_04350 0.64 -0.5 933,436 - IAI46_04350 0.79 +0.2 933,436 - IAI46_04350 0.79 -0.3 933,436 - IAI46_04350 0.79 -1.2 933,436 - IAI46_04350 0.79 +0.3 933,436 - IAI46_04350 0.79 -0.0 933,465 - IAI46_04350 0.83 +0.0 933,472 + IAI46_04350 0.84 +0.6 933,473 - IAI46_04350 0.84 -0.3 933,474 + IAI46_04350 0.84 -0.7 933,475 - IAI46_04350 0.84 -0.0 933,491 + IAI46_04350 0.86 +0.6 933,503 - IAI46_04350 0.88 -1.7 933,600 - -1.2 933,602 + -0.1 933,602 + +0.6 933,613 - +0.0 933,613 - +0.2 933,613 - +0.5 933,613 - +0.2 933,614 + +0.1 933,615 - +0.4 933,618 + +1.0 933,618 + +0.4 933,618 + +0.2 933,618 + -0.1 933,635 + +0.4 933,635 + +0.5 933,660 + +0.0 933,660 + +0.7 933,669 - -0.1 933,677 - +0.4 933,693 - -0.1 933,710 + -0.1 933,711 - -0.3 933,727 + -0.1 933,729 + -0.6 933,790 + +0.1 933,807 - +0.6 933,866 - -1.0 933,883 + -0.3 933,894 + IAI46_04355 0.13 +1.3 933,895 - IAI46_04355 0.13 +0.7
Or see this region's nucleotide sequence