Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03120 and IAI46_03125 are separated by 306 nucleotides IAI46_03125 and IAI46_03130 are separated by 192 nucleotides
IAI46_03120: IAI46_03120 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 667,764 to 668,717
_03120
IAI46_03125: IAI46_03125 - LysR family transcriptional regulator, at 669,024 to 669,947
_03125
IAI46_03130: IAI46_03130 - isocyanide synthase family protein, at 670,140 to 671,105
_03130
Position (kb) 669
670 Strain fitness (log2 ratio) -1
0
1
2 at 668.716 kb on - strand at 668.728 kb on + strand at 668.733 kb on - strand at 668.749 kb on + strand at 668.793 kb on + strand at 668.873 kb on - strand at 669.025 kb on + strand at 669.105 kb on + strand at 669.227 kb on + strand, within IAI46_03125 at 669.284 kb on + strand, within IAI46_03125 at 669.288 kb on + strand, within IAI46_03125 at 669.416 kb on + strand, within IAI46_03125 at 669.416 kb on + strand, within IAI46_03125 at 669.416 kb on + strand, within IAI46_03125 at 669.417 kb on - strand, within IAI46_03125 at 669.433 kb on + strand, within IAI46_03125 at 669.434 kb on - strand, within IAI46_03125 at 669.434 kb on - strand, within IAI46_03125 at 669.450 kb on + strand, within IAI46_03125 at 669.450 kb on + strand, within IAI46_03125 at 669.450 kb on + strand, within IAI46_03125 at 669.450 kb on + strand, within IAI46_03125 at 669.450 kb on + strand, within IAI46_03125 at 669.450 kb on + strand, within IAI46_03125 at 669.450 kb on + strand, within IAI46_03125 at 669.451 kb on - strand, within IAI46_03125 at 669.451 kb on - strand, within IAI46_03125 at 669.451 kb on - strand, within IAI46_03125 at 669.451 kb on - strand, within IAI46_03125 at 669.451 kb on - strand, within IAI46_03125 at 669.451 kb on - strand, within IAI46_03125 at 669.453 kb on + strand, within IAI46_03125 at 669.453 kb on + strand, within IAI46_03125 at 669.453 kb on + strand, within IAI46_03125 at 669.453 kb on + strand, within IAI46_03125 at 669.454 kb on - strand, within IAI46_03125 at 669.479 kb on + strand, within IAI46_03125 at 669.530 kb on + strand, within IAI46_03125 at 669.530 kb on + strand, within IAI46_03125 at 669.531 kb on - strand, within IAI46_03125 at 669.531 kb on - strand, within IAI46_03125 at 669.629 kb on - strand, within IAI46_03125 at 669.629 kb on - strand, within IAI46_03125 at 669.801 kb on + strand, within IAI46_03125 at 669.860 kb on + strand at 669.861 kb on - strand at 669.938 kb on + strand at 670.000 kb on + strand at 670.015 kb on + strand at 670.051 kb on - strand at 670.088 kb on + strand at 670.135 kb on + strand at 670.136 kb on - strand at 670.286 kb on + strand, within IAI46_03130 at 670.316 kb on - strand, within IAI46_03130 at 670.346 kb on + strand, within IAI46_03130 at 670.350 kb on - strand, within IAI46_03130 at 670.350 kb on - strand, within IAI46_03130 at 670.350 kb on - strand, within IAI46_03130 at 670.391 kb on - strand, within IAI46_03130 at 670.407 kb on - strand, within IAI46_03130 at 670.434 kb on + strand, within IAI46_03130 at 670.434 kb on + strand, within IAI46_03130 at 670.455 kb on - strand, within IAI46_03130 at 670.455 kb on - strand, within IAI46_03130 at 670.659 kb on + strand, within IAI46_03130 at 670.747 kb on - strand, within IAI46_03130 at 670.771 kb on - strand, within IAI46_03130 at 670.924 kb on + strand, within IAI46_03130 at 670.934 kb on + strand, within IAI46_03130 at 670.934 kb on + strand, within IAI46_03130 at 670.934 kb on + strand, within IAI46_03130 at 670.934 kb on + strand, within IAI46_03130 at 670.935 kb on - strand, within IAI46_03130 at 670.935 kb on - strand, within IAI46_03130 at 670.935 kb on - strand, within IAI46_03130 at 670.935 kb on - strand, within IAI46_03130
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 668,716 - -1.2 668,728 + +0.6 668,733 - -0.8 668,749 + +0.2 668,793 + +0.8 668,873 - -0.0 669,025 + +0.3 669,105 + +2.2 669,227 + IAI46_03125 0.22 +0.2 669,284 + IAI46_03125 0.28 -1.2 669,288 + IAI46_03125 0.29 +0.6 669,416 + IAI46_03125 0.42 +0.1 669,416 + IAI46_03125 0.42 +0.0 669,416 + IAI46_03125 0.42 -0.3 669,417 - IAI46_03125 0.43 +1.1 669,433 + IAI46_03125 0.44 +0.1 669,434 - IAI46_03125 0.44 +0.6 669,434 - IAI46_03125 0.44 -1.2 669,450 + IAI46_03125 0.46 -0.6 669,450 + IAI46_03125 0.46 -0.1 669,450 + IAI46_03125 0.46 +0.3 669,450 + IAI46_03125 0.46 +0.4 669,450 + IAI46_03125 0.46 -1.0 669,450 + IAI46_03125 0.46 +0.1 669,450 + IAI46_03125 0.46 +0.3 669,451 - IAI46_03125 0.46 -0.3 669,451 - IAI46_03125 0.46 -0.6 669,451 - IAI46_03125 0.46 -0.3 669,451 - IAI46_03125 0.46 +0.3 669,451 - IAI46_03125 0.46 +0.3 669,451 - IAI46_03125 0.46 +0.1 669,453 + IAI46_03125 0.46 +0.2 669,453 + IAI46_03125 0.46 +0.7 669,453 + IAI46_03125 0.46 +0.8 669,453 + IAI46_03125 0.46 +0.3 669,454 - IAI46_03125 0.47 -0.0 669,479 + IAI46_03125 0.49 -0.2 669,530 + IAI46_03125 0.55 +0.2 669,530 + IAI46_03125 0.55 +0.3 669,531 - IAI46_03125 0.55 -0.4 669,531 - IAI46_03125 0.55 -0.8 669,629 - IAI46_03125 0.65 +0.7 669,629 - IAI46_03125 0.65 +0.7 669,801 + IAI46_03125 0.84 +0.4 669,860 + +0.1 669,861 - -0.0 669,938 + -0.7 670,000 + +0.5 670,015 + -0.2 670,051 - -0.6 670,088 + +1.2 670,135 + -0.5 670,136 - +1.0 670,286 + IAI46_03130 0.15 +0.1 670,316 - IAI46_03130 0.18 -0.7 670,346 + IAI46_03130 0.21 +0.7 670,350 - IAI46_03130 0.22 -0.2 670,350 - IAI46_03130 0.22 -0.1 670,350 - IAI46_03130 0.22 +0.2 670,391 - IAI46_03130 0.26 +0.9 670,407 - IAI46_03130 0.28 -0.1 670,434 + IAI46_03130 0.30 -0.5 670,434 + IAI46_03130 0.30 -0.6 670,455 - IAI46_03130 0.33 -0.4 670,455 - IAI46_03130 0.33 -0.7 670,659 + IAI46_03130 0.54 -0.2 670,747 - IAI46_03130 0.63 +2.6 670,771 - IAI46_03130 0.65 +0.2 670,924 + IAI46_03130 0.81 -0.1 670,934 + IAI46_03130 0.82 -0.6 670,934 + IAI46_03130 0.82 -0.4 670,934 + IAI46_03130 0.82 +0.5 670,934 + IAI46_03130 0.82 +0.1 670,935 - IAI46_03130 0.82 +0.4 670,935 - IAI46_03130 0.82 +0.4 670,935 - IAI46_03130 0.82 -0.1 670,935 - IAI46_03130 0.82 -1.4
Or see this region's nucleotide sequence