Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_02920 and IAI46_02925 are separated by 111 nucleotides IAI46_02925 and IAI46_02930 are separated by 62 nucleotides IAI46_02930 and IAI46_02935 are separated by 104 nucleotides IAI46_02935 and IAI46_02940 are separated by 104 nucleotides
IAI46_02920: IAI46_02920 - phosphopentomutase, at 623,246 to 624,469
_02920
IAI46_02925: IAI46_02925 - purine-nucleoside phosphorylase, at 624,581 to 625,312
_02925
IAI46_02930: IAI46_02930 - transcriptional regulator, at 625,375 to 625,590
_02930
IAI46_02935: IAI46_02935 - YtjB family periplasmic protein, at 625,695 to 626,369
_02935
IAI46_02940: IAI46_02940 - phosphoserine phosphatase, at 626,474 to 627,451
_02940
Position (kb) 625
626 Strain fitness (log2 ratio) -2
-1
0
1 at 624.425 kb on + strand at 624.425 kb on + strand at 624.425 kb on + strand at 624.426 kb on - strand at 624.449 kb on + strand at 624.449 kb on + strand at 624.455 kb on - strand at 624.467 kb on + strand at 624.467 kb on + strand at 624.467 kb on + strand at 624.467 kb on + strand at 624.467 kb on + strand at 624.467 kb on + strand at 624.467 kb on + strand at 624.468 kb on - strand at 624.468 kb on - strand at 624.533 kb on + strand at 624.533 kb on + strand at 624.534 kb on - strand at 624.534 kb on - strand at 624.576 kb on + strand at 624.576 kb on + strand at 624.580 kb on + strand at 624.581 kb on - strand at 624.581 kb on - strand at 624.598 kb on + strand at 624.598 kb on + strand at 624.628 kb on - strand at 624.628 kb on - strand at 624.628 kb on - strand at 624.630 kb on + strand at 624.630 kb on + strand at 624.630 kb on + strand at 624.630 kb on + strand at 624.631 kb on - strand at 624.738 kb on - strand, within IAI46_02925 at 624.738 kb on - strand, within IAI46_02925 at 624.773 kb on - strand, within IAI46_02925 at 624.773 kb on - strand, within IAI46_02925 at 624.797 kb on + strand, within IAI46_02925 at 624.798 kb on - strand, within IAI46_02925 at 624.798 kb on - strand, within IAI46_02925 at 624.901 kb on + strand, within IAI46_02925 at 624.988 kb on + strand, within IAI46_02925 at 624.988 kb on + strand, within IAI46_02925 at 624.989 kb on - strand, within IAI46_02925 at 625.061 kb on + strand, within IAI46_02925 at 625.063 kb on + strand, within IAI46_02925 at 625.063 kb on + strand, within IAI46_02925 at 625.100 kb on + strand, within IAI46_02925 at 625.101 kb on - strand, within IAI46_02925 at 625.139 kb on + strand, within IAI46_02925 at 625.139 kb on + strand, within IAI46_02925 at 625.140 kb on - strand, within IAI46_02925 at 625.140 kb on - strand, within IAI46_02925 at 625.140 kb on - strand, within IAI46_02925 at 625.196 kb on - strand, within IAI46_02925 at 625.311 kb on - strand at 625.317 kb on - strand at 625.354 kb on + strand at 625.355 kb on - strand at 625.355 kb on - strand at 625.355 kb on - strand at 625.355 kb on - strand at 625.366 kb on + strand at 625.366 kb on + strand at 625.366 kb on + strand at 625.366 kb on + strand at 625.366 kb on + strand at 625.366 kb on + strand at 625.367 kb on - strand at 625.367 kb on - strand at 625.367 kb on - strand at 625.374 kb on + strand at 625.375 kb on - strand at 625.375 kb on - strand at 625.375 kb on - strand at 625.493 kb on + strand, within IAI46_02930 at 625.506 kb on + strand, within IAI46_02930 at 625.525 kb on + strand, within IAI46_02930 at 625.526 kb on - strand, within IAI46_02930 at 625.559 kb on - strand, within IAI46_02930 at 625.570 kb on + strand at 625.570 kb on + strand at 625.622 kb on - strand at 625.685 kb on + strand at 625.686 kb on - strand at 625.686 kb on - strand at 625.697 kb on - strand at 625.742 kb on + strand at 625.743 kb on - strand at 625.763 kb on + strand, within IAI46_02935 at 625.763 kb on + strand, within IAI46_02935 at 626.015 kb on + strand, within IAI46_02935 at 626.040 kb on + strand, within IAI46_02935 at 626.042 kb on + strand, within IAI46_02935 at 626.042 kb on + strand, within IAI46_02935 at 626.042 kb on + strand, within IAI46_02935 at 626.042 kb on + strand, within IAI46_02935 at 626.043 kb on - strand, within IAI46_02935 at 626.046 kb on + strand, within IAI46_02935 at 626.046 kb on + strand, within IAI46_02935 at 626.046 kb on + strand, within IAI46_02935 at 626.046 kb on + strand, within IAI46_02935 at 626.046 kb on + strand, within IAI46_02935 at 626.046 kb on + strand, within IAI46_02935 at 626.046 kb on + strand, within IAI46_02935 at 626.047 kb on - strand, within IAI46_02935 at 626.047 kb on - strand, within IAI46_02935 at 626.047 kb on - strand, within IAI46_02935 at 626.047 kb on - strand, within IAI46_02935 at 626.047 kb on - strand, within IAI46_02935 at 626.047 kb on - strand, within IAI46_02935 at 626.047 kb on - strand, within IAI46_02935 at 626.071 kb on - strand, within IAI46_02935 at 626.358 kb on - strand at 626.398 kb on + strand at 626.398 kb on + strand at 626.398 kb on + strand at 626.398 kb on + strand at 626.399 kb on - strand at 626.399 kb on - strand at 626.421 kb on + strand at 626.426 kb on + strand at 626.426 kb on + strand at 626.427 kb on - strand at 626.427 kb on - strand at 626.427 kb on - strand at 626.445 kb on - strand at 626.469 kb on + strand at 626.483 kb on - strand at 626.483 kb on - strand at 626.492 kb on + strand at 626.492 kb on + strand at 626.493 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 624,425 + -1.7 624,425 + +0.5 624,425 + +1.7 624,426 - -0.9 624,449 + -1.7 624,449 + +0.8 624,455 - -0.3 624,467 + +0.2 624,467 + -0.1 624,467 + +1.2 624,467 + +0.0 624,467 + +0.8 624,467 + -0.5 624,467 + +0.3 624,468 - -1.1 624,468 - +0.6 624,533 + -0.4 624,533 + -0.2 624,534 - -0.4 624,534 - +0.8 624,576 + -0.7 624,576 + -0.6 624,580 + +0.2 624,581 - -0.2 624,581 - -0.5 624,598 + -0.1 624,598 + +0.7 624,628 - -0.8 624,628 - -0.6 624,628 - -0.5 624,630 + +0.3 624,630 + +0.8 624,630 + +0.2 624,630 + +0.1 624,631 - -0.0 624,738 - IAI46_02925 0.21 -0.4 624,738 - IAI46_02925 0.21 -0.1 624,773 - IAI46_02925 0.26 +0.1 624,773 - IAI46_02925 0.26 +0.1 624,797 + IAI46_02925 0.30 +0.2 624,798 - IAI46_02925 0.30 +0.6 624,798 - IAI46_02925 0.30 +0.0 624,901 + IAI46_02925 0.44 +0.2 624,988 + IAI46_02925 0.56 -0.1 624,988 + IAI46_02925 0.56 +0.8 624,989 - IAI46_02925 0.56 -0.6 625,061 + IAI46_02925 0.66 -0.2 625,063 + IAI46_02925 0.66 -1.2 625,063 + IAI46_02925 0.66 +1.6 625,100 + IAI46_02925 0.71 -0.2 625,101 - IAI46_02925 0.71 +0.2 625,139 + IAI46_02925 0.76 -0.4 625,139 + IAI46_02925 0.76 -0.4 625,140 - IAI46_02925 0.76 -0.1 625,140 - IAI46_02925 0.76 -0.6 625,140 - IAI46_02925 0.76 +0.2 625,196 - IAI46_02925 0.84 +1.5 625,311 - -0.6 625,317 - -0.7 625,354 + -0.0 625,355 - -0.2 625,355 - -0.2 625,355 - -0.8 625,355 - +0.1 625,366 + +0.7 625,366 + +0.3 625,366 + +0.7 625,366 + +1.6 625,366 + -0.2 625,366 + -0.4 625,367 - +0.6 625,367 - -0.5 625,367 - +0.4 625,374 + +0.3 625,375 - +0.0 625,375 - -0.4 625,375 - +0.9 625,493 + IAI46_02930 0.55 +0.9 625,506 + IAI46_02930 0.61 -0.0 625,525 + IAI46_02930 0.69 -1.1 625,526 - IAI46_02930 0.70 +0.4 625,559 - IAI46_02930 0.85 +0.2 625,570 + -0.1 625,570 + -0.8 625,622 - +0.8 625,685 + +1.0 625,686 - -1.9 625,686 - +0.5 625,697 - -0.6 625,742 + -0.2 625,743 - -0.4 625,763 + IAI46_02935 0.10 +0.2 625,763 + IAI46_02935 0.10 +0.8 626,015 + IAI46_02935 0.47 +0.9 626,040 + IAI46_02935 0.51 +0.3 626,042 + IAI46_02935 0.51 +0.8 626,042 + IAI46_02935 0.51 -1.0 626,042 + IAI46_02935 0.51 +0.2 626,042 + IAI46_02935 0.51 -0.6 626,043 - IAI46_02935 0.52 +0.1 626,046 + IAI46_02935 0.52 +0.7 626,046 + IAI46_02935 0.52 +0.3 626,046 + IAI46_02935 0.52 +0.0 626,046 + IAI46_02935 0.52 -0.3 626,046 + IAI46_02935 0.52 +0.3 626,046 + IAI46_02935 0.52 -0.1 626,046 + IAI46_02935 0.52 -0.1 626,047 - IAI46_02935 0.52 +1.0 626,047 - IAI46_02935 0.52 -0.5 626,047 - IAI46_02935 0.52 -0.1 626,047 - IAI46_02935 0.52 +1.3 626,047 - IAI46_02935 0.52 +1.1 626,047 - IAI46_02935 0.52 -0.1 626,047 - IAI46_02935 0.52 -0.0 626,071 - IAI46_02935 0.56 -0.7 626,358 - -0.2 626,398 + +0.3 626,398 + -0.7 626,398 + -0.3 626,398 + +0.2 626,399 - +0.1 626,399 - +0.2 626,421 + +0.1 626,426 + -0.1 626,426 + -2.0 626,427 - -0.4 626,427 - -1.0 626,427 - -1.4 626,445 - -1.8 626,469 + -0.9 626,483 - -0.4 626,483 - -0.5 626,492 + -2.2 626,492 + -0.1 626,493 - -1.7
Or see this region's nucleotide sequence