Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3912

Experiment: m.b. Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cisplatin 0.05 mg/ml
4,677,905	-				-0.9
4,677,924	+				+0.1
4,677,925	-				-0.4
4,677,963	-				-1.0
4,678,147	+				+0.7
4,678,147	+				+1.4
4,678,147	+				-0.9
4,678,156	+				-1.4
4,678,177	-				-1.0
4,678,280	-				+0.6
4,678,308	+				-0.2
4,678,308	+				-0.8
4,678,308	+				-0.9
4,678,308	+				+0.3
4,678,308	+				+0.8
4,678,308	+				-0.4
4,678,309	-				+0.8
4,678,312	+				-0.8
4,678,313	-				+0.0
4,678,313	-				-2.1
4,678,313	-				-1.8
4,678,313	-				-2.3
4,678,696	+				-1.2
4,678,697	-				-0.6
4,678,697	-				-0.5
4,678,748	+				+2.1
4,678,749	-				-0.3
4,678,834	+				+0.1
4,678,835	-				+0.8
4,678,835	-				-0.4
4,678,870	-				-0.5
4,678,876	+				-0.2
4,678,878	+				+0.6
4,678,879	-				-1.0
4,679,060	+		Echvi_3912	0.12	-0.2
4,679,092	+		Echvi_3912	0.14	-0.4
4,679,093	-		Echvi_3912	0.14	+0.0
4,679,093	-		Echvi_3912	0.14	+1.2
4,679,094	+		Echvi_3912	0.14	-1.0
4,679,094	+		Echvi_3912	0.14	+1.2
4,679,095	-		Echvi_3912	0.14	-2.1
4,679,095	-		Echvi_3912	0.14	+1.2
4,679,217	+		Echvi_3912	0.21	+1.1
4,679,242	+		Echvi_3912	0.23	-0.4
4,679,243	-		Echvi_3912	0.23	+0.6
4,679,243	-		Echvi_3912	0.23	-1.3
4,679,243	-		Echvi_3912	0.23	+0.9
4,679,289	+		Echvi_3912	0.26	+2.4
4,679,365	+		Echvi_3912	0.31	+0.2
4,679,374	+		Echvi_3912	0.31	-0.5
4,679,375	-		Echvi_3912	0.31	+0.1
4,679,378	+		Echvi_3912	0.31	+0.0
4,679,378	+		Echvi_3912	0.31	+0.1
4,679,379	-		Echvi_3912	0.31	+0.4
4,679,379	-		Echvi_3912	0.31	-0.2
4,679,383	-		Echvi_3912	0.32	-2.1
4,679,383	-		Echvi_3912	0.32	+2.4
4,679,383	-		Echvi_3912	0.32	-0.4
4,679,386	+		Echvi_3912	0.32	-0.5
4,679,386	+		Echvi_3912	0.32	-0.8
4,679,386	+		Echvi_3912	0.32	-0.5
4,679,440	-		Echvi_3912	0.35	+0.2
4,679,443	+		Echvi_3912	0.35	-0.4
4,679,443	+		Echvi_3912	0.35	+0.0
4,679,443	+		Echvi_3912	0.35	-0.4
4,679,480	-		Echvi_3912	0.38	+0.3
4,679,587	-		Echvi_3912	0.44	+0.3
4,679,659	+		Echvi_3912	0.49	+0.2
4,679,660	-		Echvi_3912	0.49	-0.4
4,679,660	-		Echvi_3912	0.49	-0.7
4,679,689	+		Echvi_3912	0.50	+0.3
4,679,746	+		Echvi_3912	0.54	+1.0
4,679,772	+		Echvi_3912	0.55	+1.5
4,679,773	-		Echvi_3912	0.56	-0.2
4,679,808	+		Echvi_3912	0.58	+0.1
4,679,808	+		Echvi_3912	0.58	-1.3
4,679,925	-		Echvi_3912	0.65	+0.9
4,680,194	-		Echvi_3912	0.81	+0.3
4,680,198	+		Echvi_3912	0.82	-0.4
4,680,199	-		Echvi_3912	0.82	+1.0
4,680,204	-		Echvi_3912	0.82	+0.1
4,680,204	-		Echvi_3912	0.82	+2.0
4,680,212	-		Echvi_3912	0.83	+2.1
4,680,228	+		Echvi_3912	0.83	-1.3
4,680,228	+		Echvi_3912	0.83	-0.3
4,680,229	-		Echvi_3912	0.84	-1.7
4,680,229	-		Echvi_3912	0.84	-0.5
4,680,286	-		Echvi_3912	0.87	-1.4
4,680,288	+		Echvi_3912	0.87	+0.4
4,680,288	+		Echvi_3912	0.87	+0.5
4,680,289	-		Echvi_3912	0.87	-1.0
4,680,292	-		Echvi_3912	0.87	+0.1
4,680,371	-				+0.5
4,680,405	+				-0.9
4,680,434	+				+1.9
4,680,478	+				+1.7
4,680,479	-				-1.1
4,680,555	+				-0.3
4,680,555	+				-0.4
4,680,556	-				+0.9
4,680,688	+				-0.1
4,680,700	+				-0.3
4,680,713	+				+1.0
4,680,714	-				+0.8
4,680,817	+		Echvi_3913	0.10	+0.6
4,680,847	-		Echvi_3913	0.11	+0.4
4,680,868	+		Echvi_3913	0.12	+1.0
4,680,922	+		Echvi_3913	0.13	+0.5
4,680,928	+		Echvi_3913	0.14	-1.7
4,681,030	-		Echvi_3913	0.17	-0.2
4,681,073	-		Echvi_3913	0.18	-0.3
4,681,240	+		Echvi_3913	0.24	-0.8
4,681,249	+		Echvi_3913	0.24	-1.9
4,681,301	-		Echvi_3913	0.26	+0.9
4,681,356	+				+0.4
4,681,357	-		Echvi_3913	0.28	-0.9
4,681,363	-		Echvi_3913	0.28	-0.6
4,681,389	+		Echvi_3913	0.29	+1.5
4,681,414	+		Echvi_3913	0.29	-0.6
4,681,414	+		Echvi_3913	0.29	+0.2
4,681,484	-		Echvi_3913	0.32	+0.7