Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3375

Experiment: m.b. Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cisplatin 0.05 mg/ml
3,980,635	+				+0.3
3,980,636	-				-0.3
3,980,720	-				-0.4
3,980,738	-				-0.4
3,980,738	-				-1.3
3,980,738	-				-0.2
3,980,741	+				-0.4
3,980,741	+				+1.2
3,980,742	-				-0.2
3,980,747	-				-1.2
3,980,807	+				+0.6
3,980,808	-				-1.1
3,981,054	-		Echvi_3374	0.29	+0.5
3,981,054	-		Echvi_3374	0.29	-0.2
3,981,093	+		Echvi_3374	0.34	+0.1
3,981,093	+		Echvi_3374	0.34	+0.8
3,981,094	-		Echvi_3374	0.34	-0.4
3,981,094	-		Echvi_3374	0.34	+1.0
3,981,094	-		Echvi_3374	0.34	-0.6
3,981,094	-		Echvi_3374	0.34	+0.6
3,981,166	+		Echvi_3374	0.44	+2.1
3,981,167	-		Echvi_3374	0.45	-0.5
3,981,192	-		Echvi_3374	0.48	-0.3
3,981,284	-		Echvi_3374	0.61	-0.0
3,981,370	+		Echvi_3374	0.73	-0.3
3,981,370	+		Echvi_3374	0.73	+0.2
3,981,371	-		Echvi_3374	0.73	+0.7
3,981,371	-		Echvi_3374	0.73	+0.4
3,981,449	+		Echvi_3374	0.84	+1.3
3,981,449	+		Echvi_3374	0.84	-1.3
3,981,449	+		Echvi_3374	0.84	-0.6
3,981,449	+		Echvi_3374	0.84	-1.2
3,981,450	-		Echvi_3374	0.85	-0.4
3,981,451	+		Echvi_3374	0.85	-0.6
3,981,452	-		Echvi_3374	0.85	+0.7
3,981,512	-				-0.9
3,981,521	+				-0.5
3,981,521	+				+0.6
3,981,521	+				-1.8
3,981,521	+				-0.1
3,981,521	+				-0.5
3,981,521	+				+2.0
3,981,522	-				+0.2
3,981,522	-				-0.9
3,981,563	+				+0.2
3,981,569	+				-0.5
3,981,631	-				-0.3
3,981,759	+		Echvi_3375	0.11	-0.3
3,981,759	+		Echvi_3375	0.11	+0.4
3,981,760	-		Echvi_3375	0.11	+0.6
3,981,992	+		Echvi_3375	0.32	+0.1
3,982,070	-		Echvi_3375	0.38	+0.7
3,982,084	-		Echvi_3375	0.40	-1.2
3,982,113	+		Echvi_3375	0.42	+0.5
3,982,113	+		Echvi_3375	0.42	+0.4
3,982,114	-		Echvi_3375	0.42	-0.1
3,982,114	-		Echvi_3375	0.42	+0.1
3,982,114	-		Echvi_3375	0.42	-0.7
3,982,154	+		Echvi_3375	0.46	-0.1
3,982,155	-		Echvi_3375	0.46	-1.2
3,982,221	-		Echvi_3375	0.52	+0.6
3,982,288	-		Echvi_3375	0.57	-0.8
3,982,303	-		Echvi_3375	0.59	-0.5
3,982,320	+		Echvi_3375	0.60	+0.7
3,982,320	+		Echvi_3375	0.60	-1.5
3,982,334	-		Echvi_3375	0.61	-0.5
3,982,338	+		Echvi_3375	0.62	-2.2
3,982,339	-		Echvi_3375	0.62	-0.6
3,982,339	-		Echvi_3375	0.62	-0.9
3,982,342	+		Echvi_3375	0.62	-0.7
3,982,398	+		Echvi_3375	0.67	+1.2
3,982,425	-		Echvi_3375	0.69	-1.2
3,982,542	+		Echvi_3375	0.79	-0.4
3,982,543	-		Echvi_3375	0.80	-1.0
3,982,556	-		Echvi_3375	0.81	+0.2
3,982,744	+				+1.3
3,982,748	+				+1.8
3,982,748	+				+0.4
3,982,748	+				-0.7
3,982,748	+				+0.2
3,982,749	-				-0.6
3,982,749	-				-0.4
3,982,749	-				-0.8
3,982,749	-				-0.6
3,982,780	+				+0.0
3,982,780	+				-0.3
3,982,781	-				-1.2
3,982,781	-				+0.2
3,982,783	+				-1.0
3,982,784	-				-0.5
3,982,784	-				-0.0
3,982,784	-				-1.0
3,982,821	+				+0.2
3,982,856	-				+0.4
3,982,925	+				+0.3
3,982,964	+				+0.6
3,982,965	-				-0.9
3,982,974	+				-0.2
3,982,978	+				-0.1
3,983,045	+				+0.1
3,983,046	-				+0.6
3,983,046	-				-0.8
3,983,080	-				-0.3
3,983,211	+		Echvi_3376	0.24	+0.1
3,983,260	+		Echvi_3376	0.30	-0.4
3,983,260	+		Echvi_3376	0.30	+0.6
3,983,261	-		Echvi_3376	0.30	+1.2
3,983,261	-		Echvi_3376	0.30	-0.2
3,983,374	+		Echvi_3376	0.43	+0.9
3,983,444	+		Echvi_3376	0.51	+1.7
3,983,534	-		Echvi_3376	0.62	-0.6
3,983,630	-		Echvi_3376	0.73	-1.6
3,983,630	-		Echvi_3376	0.73	-0.2
3,983,630	-		Echvi_3376	0.73	+0.7
3,983,676	+		Echvi_3376	0.79	+0.4
3,983,676	+		Echvi_3376	0.79	+0.5
3,983,677	-		Echvi_3376	0.79	-0.6
3,983,700	-		Echvi_3376	0.81	+0.3
3,983,700	-		Echvi_3376	0.81	-0.5