Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2564

Experiment: m.b. Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cisplatin 0.05 mg/ml
3,039,879	-		Echvi_2563	0.62	+0.1
3,039,906	+		Echvi_2563	0.65	-0.1
3,039,906	+		Echvi_2563	0.65	-0.2
3,039,947	+		Echvi_2563	0.71	+0.6
3,039,948	-		Echvi_2563	0.71	+0.3
3,039,950	+		Echvi_2563	0.71	-0.3
3,039,951	-		Echvi_2563	0.71	-1.0
3,039,951	-		Echvi_2563	0.71	+1.0
3,039,951	-		Echvi_2563	0.71	-1.3
3,039,954	+		Echvi_2563	0.72	+0.2
3,039,954	+		Echvi_2563	0.72	-0.4
3,039,954	+		Echvi_2563	0.72	+0.4
3,039,955	-		Echvi_2563	0.72	-0.7
3,039,997	+		Echvi_2563	0.77	+0.4
3,039,998	-		Echvi_2563	0.78	-0.6
3,039,998	-		Echvi_2563	0.78	-1.5
3,040,120	+				+0.4
3,040,130	+				+1.8
3,040,131	-				-0.3
3,040,164	-				-0.6
3,040,212	-				+0.1
3,040,212	-				+0.0
3,040,254	-				-0.5
3,040,598	+				+1.4
3,040,598	+				-0.7
3,040,599	-				-0.3
3,040,599	-				+0.9
3,040,599	-				-0.5
3,040,601	-				-0.6
3,040,601	-				+2.1
3,040,610	+				+0.2
3,040,611	-				-1.0
3,040,611	-				-0.3
3,040,614	+				+1.0
3,040,663	+				+0.1
3,040,663	+				-2.1
3,040,664	-				+1.7
3,040,664	-				-2.1
3,040,709	-				-0.8
3,040,709	-				+0.8
3,040,709	-				-1.8
3,040,881	-				-1.2
3,040,940	-				-2.9
3,040,985	+		Echvi_2564	0.11	-1.4
3,041,012	+		Echvi_2564	0.13	+0.8
3,041,109	+		Echvi_2564	0.20	+0.1
3,041,110	-		Echvi_2564	0.20	-2.8
3,041,112	+		Echvi_2564	0.20	-1.2
3,041,112	+		Echvi_2564	0.20	-2.2
3,041,113	-		Echvi_2564	0.20	-1.3
3,041,115	-		Echvi_2564	0.20	-0.3
3,041,115	-		Echvi_2564	0.20	+0.1
3,041,219	-		Echvi_2564	0.28	-0.3
3,041,249	+		Echvi_2564	0.30	-3.9
3,041,314	+		Echvi_2564	0.35	-2.8
3,041,314	+		Echvi_2564	0.35	-2.5
3,041,314	+		Echvi_2564	0.35	+0.1
3,041,348	+		Echvi_2564	0.37	-0.8
3,041,480	+		Echvi_2564	0.47	-1.4
3,041,571	-		Echvi_2564	0.54	-2.2
3,041,604	-		Echvi_2564	0.56	-1.2
3,041,604	-		Echvi_2564	0.56	-1.4
3,041,614	-		Echvi_2564	0.57	-0.7
3,041,702	-		Echvi_2564	0.63	-1.6
3,041,702	-		Echvi_2564	0.63	-2.7
3,041,800	-		Echvi_2564	0.70	-0.9
3,041,809	+		Echvi_2564	0.71	-1.6
3,041,810	-		Echvi_2564	0.71	-2.6
3,041,823	+		Echvi_2564	0.72	-3.6
3,041,824	-		Echvi_2564	0.72	-1.4
3,041,825	+		Echvi_2564	0.72	-1.2
3,041,826	-		Echvi_2564	0.72	-2.9
3,041,960	-		Echvi_2564	0.82	-2.4
3,042,190	+				-1.1
3,042,191	-				-2.5
3,042,191	-				-1.2
3,042,200	+				-3.0
3,042,200	+				-1.2
3,042,200	+				-1.8
3,042,200	+				-2.2
3,042,200	+				-1.4
3,042,200	+				-3.8
3,042,201	-				-4.3
3,042,201	-				-2.2
3,042,201	-				-1.9
3,042,202	+				-2.1
3,042,202	+				+1.9
3,042,202	+				-1.2
3,042,202	+				-3.0
3,042,202	+				-1.9
3,042,203	-				-1.2
3,042,203	-				-0.8
3,042,203	-				-1.5
3,042,239	+				-3.1
3,042,318	-				+0.6
3,042,350	-		Echvi_2565	0.15	-1.0
3,042,388	-		Echvi_2565	0.20	+0.0
3,042,388	-		Echvi_2565	0.20	-1.4
3,042,509	+		Echvi_2565	0.38	-1.8
3,042,509	+		Echvi_2565	0.38	-0.3
3,042,509	+		Echvi_2565	0.38	+0.8
3,042,510	-		Echvi_2565	0.38	-0.3
3,042,510	-		Echvi_2565	0.38	-0.4
3,042,530	+				+1.5
3,042,543	-		Echvi_2565	0.42	+0.9
3,042,555	-		Echvi_2565	0.44	-0.2
3,042,555	-		Echvi_2565	0.44	+0.6
3,042,562	-		Echvi_2565	0.45	-0.4
3,042,650	+		Echvi_2565	0.58	+1.2
3,042,650	+		Echvi_2565	0.58	-1.6
3,042,885	-				+0.4
3,042,885	-				-0.6
3,043,037	+				+1.4
3,043,154	+				+0.3
3,043,206	+		Echvi_2566	0.13	-1.2
3,043,206	+		Echvi_2566	0.13	+0.0
3,043,206	+		Echvi_2566	0.13	-1.1
3,043,206	+		Echvi_2566	0.13	+0.6
3,043,206	+		Echvi_2566	0.13	+0.9
3,043,207	-		Echvi_2566	0.13	+1.3
3,043,207	-		Echvi_2566	0.13	-0.1
3,043,207	-		Echvi_2566	0.13	-0.0
3,043,207	-		Echvi_2566	0.13	-0.3
3,043,207	-		Echvi_2566	0.13	+0.7