Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2067 and Echvi_2068 are separated by 151 nucleotides Echvi_2068 and Echvi_2069 are separated by 55 nucleotides
Echvi_2067: Echvi_2067 - DNA repair protein RecN, at 2,436,967 to 2,438,619
_2067
Echvi_2068: Echvi_2068 - hypothetical protein, at 2,438,771 to 2,439,670
_2068
Echvi_2069: Echvi_2069 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic, at 2,439,726 to 2,440,925
_2069
Position (kb)
2438
2439
2440 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2437.795 kb on + strand, within Echvi_2067 at 2437.795 kb on + strand, within Echvi_2067 at 2437.807 kb on + strand, within Echvi_2067 at 2437.807 kb on + strand, within Echvi_2067 at 2437.807 kb on + strand, within Echvi_2067 at 2437.807 kb on + strand, within Echvi_2067 at 2437.807 kb on + strand, within Echvi_2067 at 2437.807 kb on + strand, within Echvi_2067 at 2437.808 kb on - strand, within Echvi_2067 at 2437.808 kb on - strand, within Echvi_2067 at 2437.808 kb on - strand, within Echvi_2067 at 2437.808 kb on - strand, within Echvi_2067 at 2437.808 kb on - strand, within Echvi_2067 at 2437.808 kb on - strand, within Echvi_2067 at 2437.808 kb on - strand, within Echvi_2067 at 2437.850 kb on + strand, within Echvi_2067 at 2437.907 kb on - strand, within Echvi_2067 at 2438.042 kb on - strand, within Echvi_2067 at 2438.070 kb on + strand, within Echvi_2067 at 2438.147 kb on + strand, within Echvi_2067 at 2438.148 kb on - strand, within Echvi_2067 at 2438.169 kb on + strand, within Echvi_2067 at 2438.188 kb on + strand, within Echvi_2067 at 2438.201 kb on + strand, within Echvi_2067 at 2438.282 kb on - strand, within Echvi_2067 at 2438.347 kb on - strand, within Echvi_2067 at 2438.350 kb on - strand, within Echvi_2067 at 2438.402 kb on + strand, within Echvi_2067 at 2438.403 kb on - strand, within Echvi_2067 at 2438.538 kb on + strand at 2438.549 kb on - strand at 2438.549 kb on - strand at 2438.591 kb on + strand at 2438.693 kb on + strand at 2438.693 kb on + strand at 2438.693 kb on + strand at 2438.693 kb on + strand at 2438.693 kb on + strand at 2438.694 kb on - strand at 2438.694 kb on - strand at 2438.726 kb on - strand at 2438.780 kb on - strand at 2438.780 kb on - strand at 2438.823 kb on + strand at 2438.824 kb on - strand at 2438.824 kb on - strand at 2438.935 kb on + strand, within Echvi_2068 at 2438.936 kb on - strand, within Echvi_2068 at 2439.011 kb on + strand, within Echvi_2068 at 2439.036 kb on + strand, within Echvi_2068 at 2439.036 kb on + strand, within Echvi_2068 at 2439.037 kb on - strand, within Echvi_2068 at 2439.037 kb on - strand, within Echvi_2068 at 2439.074 kb on + strand, within Echvi_2068 at 2439.074 kb on + strand, within Echvi_2068 at 2439.075 kb on - strand, within Echvi_2068 at 2439.075 kb on - strand, within Echvi_2068 at 2439.075 kb on - strand, within Echvi_2068 at 2439.075 kb on - strand, within Echvi_2068 at 2439.087 kb on - strand, within Echvi_2068 at 2439.112 kb on + strand, within Echvi_2068 at 2439.237 kb on + strand, within Echvi_2068 at 2439.238 kb on - strand, within Echvi_2068 at 2439.243 kb on + strand, within Echvi_2068 at 2439.246 kb on + strand, within Echvi_2068 at 2439.289 kb on + strand, within Echvi_2068 at 2439.363 kb on + strand, within Echvi_2068 at 2439.375 kb on + strand, within Echvi_2068 at 2439.376 kb on - strand, within Echvi_2068 at 2439.376 kb on - strand, within Echvi_2068 at 2439.377 kb on + strand, within Echvi_2068 at 2439.377 kb on + strand, within Echvi_2068 at 2439.378 kb on - strand, within Echvi_2068 at 2439.378 kb on - strand, within Echvi_2068 at 2439.378 kb on - strand, within Echvi_2068 at 2439.386 kb on + strand, within Echvi_2068 at 2439.417 kb on + strand, within Echvi_2068 at 2439.418 kb on - strand, within Echvi_2068 at 2439.448 kb on + strand, within Echvi_2068 at 2439.449 kb on - strand, within Echvi_2068 at 2439.483 kb on + strand, within Echvi_2068 at 2439.484 kb on - strand, within Echvi_2068 at 2439.670 kb on + strand at 2439.738 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 2,437,795 + Echvi_2067 0.50 -4.6 2,437,795 + Echvi_2067 0.50 -3.5 2,437,807 + Echvi_2067 0.51 -0.4 2,437,807 + Echvi_2067 0.51 -2.3 2,437,807 + Echvi_2067 0.51 -2.2 2,437,807 + Echvi_2067 0.51 -0.5 2,437,807 + Echvi_2067 0.51 +0.3 2,437,807 + Echvi_2067 0.51 -3.5 2,437,808 - Echvi_2067 0.51 -3.3 2,437,808 - Echvi_2067 0.51 -1.9 2,437,808 - Echvi_2067 0.51 -3.5 2,437,808 - Echvi_2067 0.51 -2.5 2,437,808 - Echvi_2067 0.51 -2.5 2,437,808 - Echvi_2067 0.51 -3.0 2,437,808 - Echvi_2067 0.51 -2.8 2,437,850 + Echvi_2067 0.53 -0.2 2,437,907 - Echvi_2067 0.57 -1.5 2,438,042 - Echvi_2067 0.65 -4.0 2,438,070 + Echvi_2067 0.67 -1.9 2,438,147 + Echvi_2067 0.71 +0.6 2,438,148 - Echvi_2067 0.71 +0.0 2,438,169 + Echvi_2067 0.73 -3.3 2,438,188 + Echvi_2067 0.74 -3.4 2,438,201 + Echvi_2067 0.75 -2.7 2,438,282 - Echvi_2067 0.80 -1.8 2,438,347 - Echvi_2067 0.83 -2.3 2,438,350 - Echvi_2067 0.84 -2.3 2,438,402 + Echvi_2067 0.87 -3.9 2,438,403 - Echvi_2067 0.87 -2.0 2,438,538 + -2.5 2,438,549 - -2.2 2,438,549 - -2.6 2,438,591 + -2.1 2,438,693 + +0.1 2,438,693 + -0.7 2,438,693 + -1.3 2,438,693 + -0.8 2,438,693 + -1.6 2,438,694 - -2.9 2,438,694 - -2.2 2,438,726 - -3.9 2,438,780 - +0.3 2,438,780 - -1.5 2,438,823 + +0.9 2,438,824 - +1.9 2,438,824 - +0.3 2,438,935 + Echvi_2068 0.18 +0.3 2,438,936 - Echvi_2068 0.18 -1.4 2,439,011 + Echvi_2068 0.27 +0.3 2,439,036 + Echvi_2068 0.29 -0.6 2,439,036 + Echvi_2068 0.29 +0.2 2,439,037 - Echvi_2068 0.30 -2.9 2,439,037 - Echvi_2068 0.30 -2.2 2,439,074 + Echvi_2068 0.34 +0.3 2,439,074 + Echvi_2068 0.34 -0.0 2,439,075 - Echvi_2068 0.34 -2.3 2,439,075 - Echvi_2068 0.34 -0.5 2,439,075 - Echvi_2068 0.34 -0.2 2,439,075 - Echvi_2068 0.34 -2.4 2,439,087 - Echvi_2068 0.35 -3.3 2,439,112 + Echvi_2068 0.38 -0.1 2,439,237 + Echvi_2068 0.52 +0.2 2,439,238 - Echvi_2068 0.52 -1.5 2,439,243 + Echvi_2068 0.52 +1.6 2,439,246 + Echvi_2068 0.53 -0.4 2,439,289 + Echvi_2068 0.58 -0.7 2,439,363 + Echvi_2068 0.66 -0.0 2,439,375 + Echvi_2068 0.67 +1.1 2,439,376 - Echvi_2068 0.67 -2.6 2,439,376 - Echvi_2068 0.67 -2.4 2,439,377 + Echvi_2068 0.67 -0.7 2,439,377 + Echvi_2068 0.67 -0.1 2,439,378 - Echvi_2068 0.67 -0.6 2,439,378 - Echvi_2068 0.67 -2.0 2,439,378 - Echvi_2068 0.67 -1.7 2,439,386 + Echvi_2068 0.68 -2.2 2,439,417 + Echvi_2068 0.72 -0.6 2,439,418 - Echvi_2068 0.72 -1.6 2,439,448 + Echvi_2068 0.75 -0.1 2,439,449 - Echvi_2068 0.75 -2.9 2,439,483 + Echvi_2068 0.79 -0.6 2,439,484 - Echvi_2068 0.79 -1.7 2,439,670 + -0.1 2,439,738 + -1.1
Or see this region's nucleotide sequence