Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0556 and Echvi_0557 are separated by 263 nucleotides Echvi_0557 and Echvi_0558 are separated by 208 nucleotides Echvi_0558 and Echvi_0559 are separated by 498 nucleotides
Echvi_0556: Echvi_0556 - Alpha-L-fucosidase, at 627,746 to 629,080
_0556
Echvi_0557: Echvi_0557 - Molecular chaperone (small heat shock protein), at 629,344 to 629,772
_0557
Echvi_0558: Echvi_0558 - periplasmic serine protease, Do/DeqQ family, at 629,981 to 631,468
_0558
Echvi_0559: Echvi_0559 - hypothetical protein, at 631,967 to 633,889
_0559
Position (kb) 629
630
631
632 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 628.991 kb on + strand at 629.088 kb on - strand at 629.099 kb on + strand at 629.172 kb on - strand at 629.172 kb on - strand at 629.292 kb on - strand at 629.340 kb on + strand at 629.340 kb on + strand at 629.343 kb on + strand at 629.344 kb on - strand at 629.344 kb on - strand at 629.359 kb on + strand at 629.359 kb on + strand at 629.359 kb on + strand at 629.360 kb on - strand at 629.388 kb on + strand, within Echvi_0557 at 629.388 kb on + strand, within Echvi_0557 at 629.388 kb on + strand, within Echvi_0557 at 629.488 kb on + strand, within Echvi_0557 at 629.488 kb on + strand, within Echvi_0557 at 629.546 kb on + strand, within Echvi_0557 at 629.546 kb on + strand, within Echvi_0557 at 629.546 kb on + strand, within Echvi_0557 at 629.547 kb on - strand, within Echvi_0557 at 629.547 kb on - strand, within Echvi_0557 at 629.553 kb on + strand, within Echvi_0557 at 629.727 kb on + strand, within Echvi_0557 at 629.727 kb on + strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.770 kb on + strand at 629.778 kb on - strand at 629.881 kb on - strand at 629.894 kb on + strand at 629.937 kb on - strand at 630.027 kb on + strand at 630.028 kb on - strand at 630.028 kb on - strand at 630.055 kb on - strand at 630.085 kb on + strand at 630.085 kb on + strand at 630.086 kb on - strand at 630.106 kb on + strand at 630.127 kb on - strand at 630.187 kb on - strand, within Echvi_0558 at 630.215 kb on - strand, within Echvi_0558 at 630.275 kb on - strand, within Echvi_0558 at 630.340 kb on - strand, within Echvi_0558 at 630.353 kb on + strand, within Echvi_0558 at 630.354 kb on - strand, within Echvi_0558 at 630.354 kb on - strand, within Echvi_0558 at 630.378 kb on + strand at 630.378 kb on + strand, within Echvi_0558 at 630.396 kb on + strand, within Echvi_0558 at 630.397 kb on - strand, within Echvi_0558 at 630.411 kb on - strand, within Echvi_0558 at 630.425 kb on + strand, within Echvi_0558 at 630.426 kb on - strand, within Echvi_0558 at 630.426 kb on - strand, within Echvi_0558 at 630.433 kb on + strand, within Echvi_0558 at 630.434 kb on - strand, within Echvi_0558 at 630.438 kb on + strand, within Echvi_0558 at 630.454 kb on + strand, within Echvi_0558 at 630.455 kb on - strand, within Echvi_0558 at 630.474 kb on + strand, within Echvi_0558 at 630.504 kb on + strand, within Echvi_0558 at 630.555 kb on + strand, within Echvi_0558 at 630.574 kb on + strand, within Echvi_0558 at 630.718 kb on + strand, within Echvi_0558 at 630.798 kb on + strand, within Echvi_0558 at 630.799 kb on - strand, within Echvi_0558 at 630.842 kb on + strand, within Echvi_0558 at 630.906 kb on - strand, within Echvi_0558 at 630.939 kb on + strand, within Echvi_0558 at 630.939 kb on + strand, within Echvi_0558 at 630.939 kb on + strand, within Echvi_0558 at 630.939 kb on + strand, within Echvi_0558 at 630.940 kb on - strand, within Echvi_0558 at 630.941 kb on + strand, within Echvi_0558 at 630.941 kb on + strand, within Echvi_0558 at 630.941 kb on + strand, within Echvi_0558 at 630.942 kb on - strand, within Echvi_0558 at 630.942 kb on - strand, within Echvi_0558 at 630.942 kb on - strand, within Echvi_0558 at 630.942 kb on - strand, within Echvi_0558 at 630.942 kb on - strand, within Echvi_0558 at 631.000 kb on + strand, within Echvi_0558 at 631.001 kb on - strand, within Echvi_0558 at 631.015 kb on - strand, within Echvi_0558 at 631.048 kb on - strand, within Echvi_0558 at 631.097 kb on + strand, within Echvi_0558 at 631.098 kb on - strand, within Echvi_0558 at 631.127 kb on - strand, within Echvi_0558 at 631.156 kb on + strand, within Echvi_0558 at 631.214 kb on - strand, within Echvi_0558 at 631.269 kb on + strand, within Echvi_0558 at 631.270 kb on - strand, within Echvi_0558 at 631.278 kb on + strand, within Echvi_0558 at 631.278 kb on + strand, within Echvi_0558 at 631.279 kb on - strand, within Echvi_0558 at 631.279 kb on - strand, within Echvi_0558 at 631.350 kb on + strand at 631.350 kb on + strand at 631.390 kb on + strand at 631.466 kb on + strand at 631.466 kb on + strand at 631.467 kb on - strand at 631.467 kb on - strand at 631.467 kb on - strand at 631.470 kb on - strand at 631.479 kb on - strand at 631.487 kb on + strand at 631.492 kb on - strand at 631.492 kb on - strand at 631.492 kb on - strand at 631.492 kb on - strand at 631.530 kb on - strand at 631.534 kb on + strand at 631.535 kb on - strand at 631.535 kb on - strand at 631.536 kb on + strand at 631.536 kb on + strand at 631.536 kb on + strand at 631.542 kb on - strand at 631.567 kb on + strand at 631.568 kb on - strand at 631.623 kb on - strand at 631.653 kb on - strand at 631.877 kb on + strand at 631.877 kb on + strand at 631.924 kb on + strand at 631.951 kb on - strand at 631.954 kb on - strand at 631.963 kb on + strand at 632.084 kb on + strand at 632.120 kb on - strand at 632.120 kb on - strand at 632.243 kb on - strand, within Echvi_0559 at 632.262 kb on + strand, within Echvi_0559 at 632.262 kb on + strand, within Echvi_0559 at 632.263 kb on - strand, within Echvi_0559 at 632.263 kb on - strand, within Echvi_0559 at 632.430 kb on - strand, within Echvi_0559
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 628,991 + +0.4 629,088 - -0.3 629,099 + -0.9 629,172 - -0.0 629,172 - -0.1 629,292 - +0.6 629,340 + -0.1 629,340 + +0.0 629,343 + +0.3 629,344 - +0.2 629,344 - +0.4 629,359 + -0.4 629,359 + -0.9 629,359 + +0.1 629,360 - +0.5 629,388 + Echvi_0557 0.10 -1.4 629,388 + Echvi_0557 0.10 +0.7 629,388 + Echvi_0557 0.10 -1.1 629,488 + Echvi_0557 0.34 -3.0 629,488 + Echvi_0557 0.34 -0.8 629,546 + Echvi_0557 0.47 -1.3 629,546 + Echvi_0557 0.47 -1.6 629,546 + Echvi_0557 0.47 -1.2 629,547 - Echvi_0557 0.47 +0.3 629,547 - Echvi_0557 0.47 +1.8 629,553 + Echvi_0557 0.49 -0.2 629,727 + Echvi_0557 0.89 -1.7 629,727 + Echvi_0557 0.89 -1.0 629,728 - Echvi_0557 0.90 +0.3 629,728 - Echvi_0557 0.90 -0.5 629,728 - Echvi_0557 0.90 +0.0 629,728 - Echvi_0557 0.90 +0.6 629,770 + -3.3 629,778 - -0.4 629,881 - +1.2 629,894 + -0.3 629,937 - -0.6 630,027 + +0.4 630,028 - +0.9 630,028 - +1.5 630,055 - +0.1 630,085 + +1.4 630,085 + +1.0 630,086 - +0.2 630,106 + -0.1 630,127 - -0.0 630,187 - Echvi_0558 0.14 -3.1 630,215 - Echvi_0558 0.16 -1.1 630,275 - Echvi_0558 0.20 +0.4 630,340 - Echvi_0558 0.24 +0.4 630,353 + Echvi_0558 0.25 -1.0 630,354 - Echvi_0558 0.25 +0.2 630,354 - Echvi_0558 0.25 -1.1 630,378 + +1.5 630,378 + Echvi_0558 0.27 -1.1 630,396 + Echvi_0558 0.28 -1.0 630,397 - Echvi_0558 0.28 +1.5 630,411 - Echvi_0558 0.29 +0.1 630,425 + Echvi_0558 0.30 +0.1 630,426 - Echvi_0558 0.30 -0.1 630,426 - Echvi_0558 0.30 +0.6 630,433 + Echvi_0558 0.30 -0.1 630,434 - Echvi_0558 0.30 +0.4 630,438 + Echvi_0558 0.31 -1.1 630,454 + Echvi_0558 0.32 -0.0 630,455 - Echvi_0558 0.32 -0.2 630,474 + Echvi_0558 0.33 -0.4 630,504 + Echvi_0558 0.35 -0.1 630,555 + Echvi_0558 0.39 -1.3 630,574 + Echvi_0558 0.40 +1.3 630,718 + Echvi_0558 0.50 +0.2 630,798 + Echvi_0558 0.55 -1.4 630,799 - Echvi_0558 0.55 +0.0 630,842 + Echvi_0558 0.58 -1.3 630,906 - Echvi_0558 0.62 +1.2 630,939 + Echvi_0558 0.64 -1.7 630,939 + Echvi_0558 0.64 -1.4 630,939 + Echvi_0558 0.64 -0.4 630,939 + Echvi_0558 0.64 -0.0 630,940 - Echvi_0558 0.64 -0.2 630,941 + Echvi_0558 0.65 -1.1 630,941 + Echvi_0558 0.65 -2.3 630,941 + Echvi_0558 0.65 -0.3 630,942 - Echvi_0558 0.65 -0.3 630,942 - Echvi_0558 0.65 -0.7 630,942 - Echvi_0558 0.65 +0.1 630,942 - Echvi_0558 0.65 -0.7 630,942 - Echvi_0558 0.65 +0.0 631,000 + Echvi_0558 0.68 -0.5 631,001 - Echvi_0558 0.69 +0.5 631,015 - Echvi_0558 0.69 -0.7 631,048 - Echvi_0558 0.72 -2.2 631,097 + Echvi_0558 0.75 -2.0 631,098 - Echvi_0558 0.75 +0.7 631,127 - Echvi_0558 0.77 -1.0 631,156 + Echvi_0558 0.79 -0.8 631,214 - Echvi_0558 0.83 -0.1 631,269 + Echvi_0558 0.87 -1.8 631,270 - Echvi_0558 0.87 -0.1 631,278 + Echvi_0558 0.87 -0.4 631,278 + Echvi_0558 0.87 +1.4 631,279 - Echvi_0558 0.87 +0.4 631,279 - Echvi_0558 0.87 +1.5 631,350 + +0.6 631,350 + -1.4 631,390 + -0.9 631,466 + -0.9 631,466 + +0.9 631,467 - -0.4 631,467 - -0.1 631,467 - +0.2 631,470 - -0.4 631,479 - -1.2 631,487 + -0.6 631,492 - +0.2 631,492 - +0.8 631,492 - -0.5 631,492 - -2.8 631,530 - +0.9 631,534 + -0.1 631,535 - -0.1 631,535 - +0.3 631,536 + +0.4 631,536 + -0.5 631,536 + -0.0 631,542 - +0.9 631,567 + -1.1 631,568 - -0.1 631,623 - -1.8 631,653 - +0.7 631,877 + +0.5 631,877 + -0.0 631,924 + -0.4 631,951 - -0.1 631,954 - +1.3 631,963 + +0.2 632,084 + +1.1 632,120 - -0.5 632,120 - -1.0 632,243 - Echvi_0559 0.14 +0.2 632,262 + Echvi_0559 0.15 -1.4 632,262 + Echvi_0559 0.15 -0.2 632,263 - Echvi_0559 0.15 +0.1 632,263 - Echvi_0559 0.15 -1.9 632,430 - Echvi_0559 0.24 -0.3
Or see this region's nucleotide sequence