Strain Fitness in Escherichia coli BL21 around ECD_02051

Experiment: NophageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02050 and ECD_02051 overlap by 4 nucleotidesECD_02051 and ECD_02052 are separated by 124 nucleotidesECD_02052 and ECD_02053 are separated by 40 nucleotides ECD_02050: ECD_02050 - VMA domain putative YehL ATPase stimulator, at 2,102,829 to 2,103,965 _02050 ECD_02051: ECD_02051 - hypothetical protein, at 2,103,962 to 2,105,962 _02051 ECD_02052: ECD_02052 - lipoprotein, DUF1307 family, at 2,106,087 to 2,106,548 _02052 ECD_02053: ECD_02053 - DUF1456 family protein, at 2,106,589 to 2,107,059 _02053 Position (kb) 2103 2104 2105 2106Strain fitness (log2 ratio) -2 -1 0 1at 2103.159 kb on - strand, within ECD_02050at 2103.339 kb on - strand, within ECD_02050at 2103.973 kb on - strandat 2103.987 kb on + strandat 2103.987 kb on + strandat 2104.190 kb on - strand, within ECD_02051at 2104.495 kb on - strand, within ECD_02051at 2104.551 kb on + strand, within ECD_02051at 2104.552 kb on - strand, within ECD_02051at 2104.631 kb on + strand, within ECD_02051at 2104.632 kb on - strand, within ECD_02051at 2104.656 kb on + strand, within ECD_02051at 2104.684 kb on + strand, within ECD_02051at 2104.812 kb on - strand, within ECD_02051at 2104.990 kb on + strand, within ECD_02051at 2104.991 kb on - strand, within ECD_02051at 2105.315 kb on + strand, within ECD_02051at 2105.371 kb on - strand, within ECD_02051at 2105.443 kb on - strand, within ECD_02051at 2105.746 kb on + strand, within ECD_02051at 2105.792 kb on - strandat 2106.027 kb on - strandat 2106.032 kb on - strandat 2106.101 kb on + strandat 2106.219 kb on + strand, within ECD_02052at 2106.219 kb on + strand, within ECD_02052at 2106.219 kb on + strand, within ECD_02052at 2106.226 kb on - strand, within ECD_02052at 2106.245 kb on + strand, within ECD_02052at 2106.494 kb on + strand, within ECD_02052

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Per-strain Table

Position Strand Gene LocusTag Fraction NophageControl
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2,103,159 - ECD_02050 0.29 -1.6
2,103,339 - ECD_02050 0.45 +0.5
2,103,973 - -0.7
2,103,987 + +0.8
2,103,987 + -0.6
2,104,190 - ECD_02051 0.11 -1.0
2,104,495 - ECD_02051 0.27 +0.4
2,104,551 + ECD_02051 0.29 -1.8
2,104,552 - ECD_02051 0.29 -0.3
2,104,631 + ECD_02051 0.33 +0.2
2,104,632 - ECD_02051 0.33 +0.8
2,104,656 + ECD_02051 0.35 +0.8
2,104,684 + ECD_02051 0.36 +1.4
2,104,812 - ECD_02051 0.42 +0.1
2,104,990 + ECD_02051 0.51 -0.1
2,104,991 - ECD_02051 0.51 -0.1
2,105,315 + ECD_02051 0.68 -0.4
2,105,371 - ECD_02051 0.70 +0.3
2,105,443 - ECD_02051 0.74 -0.1
2,105,746 + ECD_02051 0.89 +0.4
2,105,792 - -1.3
2,106,027 - +0.1
2,106,032 - +0.4
2,106,101 + -0.4
2,106,219 + ECD_02052 0.29 +0.7
2,106,219 + ECD_02052 0.29 +0.8
2,106,219 + ECD_02052 0.29 -0.9
2,106,226 - ECD_02052 0.30 +1.0
2,106,245 + ECD_02052 0.34 -0.1
2,106,494 + ECD_02052 0.88 -0.3

Or see this region's nucleotide sequence