Strain Fitness in Escherichia coli BL21 around ECD_01073

Experiment: NophageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01072 and ECD_01073 are separated by 19 nucleotidesECD_01073 and ECD_01074 are separated by 171 nucleotides ECD_01072: ECD_01072 - flagellar hook protein, at 1,135,144 to 1,136,349 _01072 ECD_01073: ECD_01073 - flagellar component of cell-proximal portion of basal-body rod, at 1,136,369 to 1,137,124 _01073 ECD_01074: ECD_01074 - flagellar component of cell-distal portion of basal-body rod, at 1,137,296 to 1,138,078 _01074 Position (kb) 1136 1137 1138Strain fitness (log2 ratio) -1 0 1 2at 1135.473 kb on + strand, within ECD_01072at 1135.484 kb on + strand, within ECD_01072at 1135.587 kb on + strand, within ECD_01072at 1135.675 kb on + strand, within ECD_01072at 1135.774 kb on + strand, within ECD_01072at 1135.774 kb on + strand, within ECD_01072at 1135.803 kb on + strand, within ECD_01072at 1135.875 kb on + strand, within ECD_01072at 1135.890 kb on + strand, within ECD_01072at 1135.962 kb on + strand, within ECD_01072at 1136.011 kb on + strand, within ECD_01072at 1136.259 kb on + strandat 1136.277 kb on + strandat 1136.281 kb on + strandat 1136.289 kb on + strandat 1136.337 kb on + strandat 1136.342 kb on + strandat 1136.362 kb on + strandat 1136.362 kb on + strandat 1136.384 kb on + strandat 1137.134 kb on + strandat 1137.145 kb on + strandat 1137.145 kb on + strandat 1137.145 kb on + strandat 1137.145 kb on + strandat 1137.147 kb on + strandat 1137.147 kb on + strandat 1137.147 kb on + strandat 1137.260 kb on + strandat 1137.295 kb on + strandat 1137.385 kb on + strand, within ECD_01074at 1137.510 kb on + strand, within ECD_01074at 1137.635 kb on + strand, within ECD_01074at 1137.735 kb on + strand, within ECD_01074at 1137.739 kb on + strand, within ECD_01074at 1137.947 kb on + strand, within ECD_01074at 1138.027 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NophageControl
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1,135,473 + ECD_01072 0.27 +0.2
1,135,484 + ECD_01072 0.28 -0.3
1,135,587 + ECD_01072 0.37 -0.1
1,135,675 + ECD_01072 0.44 +0.8
1,135,774 + ECD_01072 0.52 +0.1
1,135,774 + ECD_01072 0.52 +0.9
1,135,803 + ECD_01072 0.55 -0.2
1,135,875 + ECD_01072 0.61 +1.9
1,135,890 + ECD_01072 0.62 +0.5
1,135,962 + ECD_01072 0.68 -0.3
1,136,011 + ECD_01072 0.72 +0.8
1,136,259 + +0.7
1,136,277 + +0.2
1,136,281 + -1.4
1,136,289 + +0.5
1,136,337 + -1.0
1,136,342 + -0.0
1,136,362 + -0.2
1,136,362 + +1.5
1,136,384 + +0.6
1,137,134 + -0.1
1,137,145 + -0.1
1,137,145 + +0.2
1,137,145 + +0.8
1,137,145 + -0.1
1,137,147 + +0.7
1,137,147 + +1.5
1,137,147 + +0.8
1,137,260 + +0.8
1,137,295 + +0.5
1,137,385 + ECD_01074 0.11 +0.0
1,137,510 + ECD_01074 0.27 +0.2
1,137,635 + ECD_01074 0.43 -1.1
1,137,735 + ECD_01074 0.56 -0.1
1,137,739 + ECD_01074 0.57 +0.4
1,137,947 + ECD_01074 0.83 +0.8
1,138,027 + +0.1

Or see this region's nucleotide sequence