Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS08410 and ABID97_RS08415 are separated by 49 nucleotides ABID97_RS08415 and ABID97_RS08420 are separated by 22 nucleotides ABID97_RS08420 and ABID97_RS08425 are separated by 66 nucleotides ABID97_RS08425 and ABID97_RS08430 overlap by 1 nucleotides
ABID97_RS08410: ABID97_RS08410 - LON peptidase substrate-binding domain-containing protein, at 1,766,602 to 1,767,249
_RS08410
ABID97_RS08415: ABID97_RS08415 - YggT family protein, at 1,767,299 to 1,767,856
_RS08415
ABID97_RS08420: ABID97_RS08420 - acetyl-CoA carboxylase, carboxyltransferase subunit beta, at 1,767,879 to 1,768,751
_RS08420
ABID97_RS08425: ABID97_RS08425 - tryptophan synthase subunit alpha, at 1,768,818 to 1,769,663
_RS08425
ABID97_RS08430: ABID97_RS08430 - tryptophan synthase subunit beta, at 1,769,663 to 1,770,937
_RS08430
Position (kb) 1767
1768
1769 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1767.149 kb on + strand, within ABID97_RS08410 at 1767.149 kb on + strand, within ABID97_RS08410 at 1767.150 kb on - strand, within ABID97_RS08410 at 1767.150 kb on - strand, within ABID97_RS08410 at 1767.154 kb on + strand, within ABID97_RS08410 at 1767.154 kb on + strand, within ABID97_RS08410 at 1767.155 kb on - strand, within ABID97_RS08410 at 1767.166 kb on - strand, within ABID97_RS08410 at 1767.268 kb on + strand at 1767.269 kb on - strand at 1767.269 kb on - strand at 1767.269 kb on - strand at 1767.374 kb on + strand, within ABID97_RS08415 at 1767.374 kb on + strand, within ABID97_RS08415 at 1767.375 kb on - strand, within ABID97_RS08415 at 1767.375 kb on - strand, within ABID97_RS08415 at 1767.375 kb on - strand, within ABID97_RS08415 at 1767.375 kb on - strand, within ABID97_RS08415 at 1767.375 kb on - strand, within ABID97_RS08415 at 1767.383 kb on + strand, within ABID97_RS08415 at 1767.383 kb on + strand, within ABID97_RS08415 at 1767.384 kb on - strand, within ABID97_RS08415 at 1767.650 kb on + strand, within ABID97_RS08415 at 1767.650 kb on + strand, within ABID97_RS08415 at 1767.651 kb on - strand, within ABID97_RS08415 at 1767.651 kb on - strand, within ABID97_RS08415 at 1768.752 kb on - strand at 1768.766 kb on - strand at 1769.125 kb on + strand, within ABID97_RS08425 at 1769.125 kb on + strand, within ABID97_RS08425 at 1769.125 kb on + strand, within ABID97_RS08425 at 1769.126 kb on - strand, within ABID97_RS08425 at 1769.126 kb on - strand, within ABID97_RS08425 at 1769.126 kb on - strand, within ABID97_RS08425 at 1769.128 kb on + strand, within ABID97_RS08425 at 1769.128 kb on + strand, within ABID97_RS08425 at 1769.129 kb on - strand, within ABID97_RS08425 at 1769.129 kb on - strand, within ABID97_RS08425 at 1769.129 kb on - strand, within ABID97_RS08425 at 1769.134 kb on + strand, within ABID97_RS08425 at 1769.135 kb on - strand, within ABID97_RS08425 at 1769.135 kb on - strand, within ABID97_RS08425 at 1769.135 kb on - strand, within ABID97_RS08425 at 1769.360 kb on - strand, within ABID97_RS08425 at 1769.599 kb on + strand at 1769.600 kb on - strand at 1769.600 kb on - strand at 1769.709 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 1,767,149 + ABID97_RS08410 0.84 +0.5 1,767,149 + ABID97_RS08410 0.84 -0.0 1,767,150 - ABID97_RS08410 0.85 +0.3 1,767,150 - ABID97_RS08410 0.85 -0.0 1,767,154 + ABID97_RS08410 0.85 -0.0 1,767,154 + ABID97_RS08410 0.85 +0.0 1,767,155 - ABID97_RS08410 0.85 +0.1 1,767,166 - ABID97_RS08410 0.87 +0.0 1,767,268 + -1.9 1,767,269 - -0.6 1,767,269 - -1.6 1,767,269 - -0.7 1,767,374 + ABID97_RS08415 0.13 +0.1 1,767,374 + ABID97_RS08415 0.13 -0.1 1,767,375 - ABID97_RS08415 0.14 +0.5 1,767,375 - ABID97_RS08415 0.14 +0.5 1,767,375 - ABID97_RS08415 0.14 +0.5 1,767,375 - ABID97_RS08415 0.14 -0.2 1,767,375 - ABID97_RS08415 0.14 +0.2 1,767,383 + ABID97_RS08415 0.15 +1.2 1,767,383 + ABID97_RS08415 0.15 -0.3 1,767,384 - ABID97_RS08415 0.15 +0.6 1,767,650 + ABID97_RS08415 0.63 +0.6 1,767,650 + ABID97_RS08415 0.63 +0.1 1,767,651 - ABID97_RS08415 0.63 +0.2 1,767,651 - ABID97_RS08415 0.63 -0.0 1,768,752 - -2.2 1,768,766 - -0.5 1,769,125 + ABID97_RS08425 0.36 -0.5 1,769,125 + ABID97_RS08425 0.36 +0.8 1,769,125 + ABID97_RS08425 0.36 -1.5 1,769,126 - ABID97_RS08425 0.36 -2.4 1,769,126 - ABID97_RS08425 0.36 -2.4 1,769,126 - ABID97_RS08425 0.36 -3.1 1,769,128 + ABID97_RS08425 0.37 -3.6 1,769,128 + ABID97_RS08425 0.37 -1.2 1,769,129 - ABID97_RS08425 0.37 -1.8 1,769,129 - ABID97_RS08425 0.37 -1.3 1,769,129 - ABID97_RS08425 0.37 -1.2 1,769,134 + ABID97_RS08425 0.37 -2.6 1,769,135 - ABID97_RS08425 0.37 -2.3 1,769,135 - ABID97_RS08425 0.37 -2.7 1,769,135 - ABID97_RS08425 0.37 -0.5 1,769,360 - ABID97_RS08425 0.64 -3.0 1,769,599 + +0.2 1,769,600 - -3.3 1,769,600 - -1.0 1,769,709 + +0.8
Or see this region's nucleotide sequence