Strain Fitness in Serratia liquefaciens MT49 around IAI46_25220

Experiment: Cobalt chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cobalt chloride 80 uM, aerobic
5,383,590	-		IAI46_25215	0.13	-1.0
5,383,595	+		IAI46_25215	0.14	-0.2
5,383,596	-		IAI46_25215	0.14	+0.1
5,383,596	-		IAI46_25215	0.14	+1.1
5,383,596	-		IAI46_25215	0.14	+0.6
5,383,596	-		IAI46_25215	0.14	-0.3
5,383,618	+		IAI46_25215	0.17	-0.7
5,384,006	+		IAI46_25215	0.76	+1.7
5,384,015	-		IAI46_25215	0.77	+0.6
5,384,092	+		IAI46_25215	0.88	+0.4
5,384,092	+		IAI46_25215	0.88	-0.3
5,384,092	+		IAI46_25215	0.88	-0.2
5,384,092	+		IAI46_25215	0.88	+0.2
5,384,093	-		IAI46_25215	0.89	-0.7
5,384,093	-		IAI46_25215	0.89	-0.2
5,384,096	+		IAI46_25215	0.89	+0.4
5,384,151	-				+0.5
5,384,261	-				+0.3
5,384,270	+				-0.0
5,384,271	-				+1.6
5,384,271	-				+0.2
5,384,288	-				+1.2
5,384,289	+				+0.2
5,384,348	+				-1.1
5,384,348	+				-0.4
5,384,350	+				-0.0
5,384,351	-				+0.6
5,384,407	+				-0.4
5,384,408	-				+0.2
5,384,408	-				-1.1
5,384,408	-				+0.8
5,384,415	+				+0.2
5,384,416	-				-0.5
5,384,416	-				+0.3
5,384,473	+				+0.4
5,384,473	+				-1.1
5,384,473	+				+0.4
5,384,473	+				-0.0
5,384,473	+				-0.4
5,384,473	+				+0.4
5,384,474	-				+0.1
5,384,474	-				+0.5
5,384,517	-				-0.2
5,384,531	+				-0.1
5,384,531	+				+0.1
5,384,532	-				+0.4
5,384,532	-				+0.2
5,384,595	+				-0.4
5,384,625	+				-0.3
5,384,625	+				-0.4
5,384,625	+				-0.2
5,384,625	+				-0.2
5,384,625	+				-0.1
5,384,626	-				-0.1
5,384,647	+				-0.5
5,384,647	+				-0.5
5,384,647	+				-0.9
5,384,648	-				+0.2
5,384,648	-				-0.5
5,384,648	-				-0.9
5,384,648	-				-0.7
5,384,648	-				+0.2
5,384,648	-				+1.0
5,384,648	-				+0.4
5,384,648	-				+0.5
5,384,649	+				+1.0
5,384,888	+		IAI46_25220	0.28	-0.6
5,384,971	-		IAI46_25220	0.34	+0.4
5,385,096	+		IAI46_25220	0.43	+0.6
5,385,096	+		IAI46_25220	0.43	-0.4
5,385,097	-		IAI46_25220	0.43	-0.3
5,385,148	-		IAI46_25220	0.47	+0.5
5,385,193	+		IAI46_25220	0.50	+0.1
5,385,194	-		IAI46_25220	0.51	-0.9
5,385,219	+		IAI46_25220	0.52	-0.2
5,385,219	+		IAI46_25220	0.52	-0.0
5,385,219	+		IAI46_25220	0.52	-0.3
5,385,219	+		IAI46_25220	0.52	-0.1
5,385,268	-		IAI46_25220	0.56	-0.5
5,385,268	-		IAI46_25220	0.56	+0.2
5,385,297	+		IAI46_25220	0.58	+0.3
5,385,298	-		IAI46_25220	0.58	+0.0
5,385,298	-		IAI46_25220	0.58	-0.1
5,385,375	+		IAI46_25220	0.64	-1.0
5,385,375	+		IAI46_25220	0.64	+0.4
5,385,376	-		IAI46_25220	0.64	+1.0
5,385,376	-		IAI46_25220	0.64	+0.4
5,385,376	-		IAI46_25220	0.64	-0.6
5,385,403	+		IAI46_25220	0.66	+0.2
5,385,403	+		IAI46_25220	0.66	-0.1
5,385,403	+		IAI46_25220	0.66	-0.6
5,385,403	+		IAI46_25220	0.66	+0.1
5,385,404	-		IAI46_25220	0.66	-0.2
5,385,404	-		IAI46_25220	0.66	-0.3
5,385,404	-		IAI46_25220	0.66	-0.4
5,385,404	-		IAI46_25220	0.66	+0.6
5,385,404	-		IAI46_25220	0.66	+0.3
5,385,463	+		IAI46_25220	0.71	+0.5
5,385,463	+		IAI46_25220	0.71	-0.7
5,385,463	+		IAI46_25220	0.71	+0.2
5,385,465	+		IAI46_25220	0.71	-0.2
5,385,465	+		IAI46_25220	0.71	-0.2
5,385,583	+		IAI46_25220	0.80	-0.1
5,385,584	-		IAI46_25220	0.80	+0.4
5,385,607	+		IAI46_25220	0.81	+0.5
5,385,607	+		IAI46_25220	0.81	-0.5
5,385,607	+		IAI46_25220	0.81	-0.9
5,385,607	+		IAI46_25220	0.81	-0.4
5,385,607	+		IAI46_25220	0.81	-0.2
5,385,608	-		IAI46_25220	0.81	-1.2
5,385,608	-		IAI46_25220	0.81	-0.2
5,385,608	-		IAI46_25220	0.81	-0.3
5,385,741	+				-0.0
5,385,748	+				+0.8
5,385,842	+				-0.7
5,385,853	+				+0.6
5,385,854	-				-1.5
5,385,888	-				-0.1
5,385,895	-				-0.4
5,385,895	-				+0.1
5,385,938	+				-0.4
5,385,938	+				-0.0
5,385,939	-				+0.1
5,385,939	-				+0.1
5,385,939	-				+1.6
5,386,007	+		IAI46_25225	0.11	-0.0
5,386,008	-		IAI46_25225	0.11	-0.2
5,386,015	+		IAI46_25225	0.12	+0.0
5,386,016	-		IAI46_25225	0.12	+0.4
5,386,016	-		IAI46_25225	0.12	-1.0
5,386,016	-		IAI46_25225	0.12	-0.3
5,386,016	-		IAI46_25225	0.12	-0.5
5,386,080	+		IAI46_25225	0.18	+0.1
5,386,081	-		IAI46_25225	0.18	+0.4
5,386,081	-		IAI46_25225	0.18	+0.3
5,386,083	+		IAI46_25225	0.18	-0.4
5,386,084	-		IAI46_25225	0.18	+0.2
5,386,084	-		IAI46_25225	0.18	-0.6
5,386,103	-		IAI46_25225	0.20	-0.1
5,386,170	+		IAI46_25225	0.26	+0.6
5,386,170	+		IAI46_25225	0.26	-0.3
5,386,170	+		IAI46_25225	0.26	+0.2
5,386,171	-		IAI46_25225	0.26	+0.2
5,386,171	-		IAI46_25225	0.26	-0.8
5,386,172	+		IAI46_25225	0.27	+1.8
5,386,172	+		IAI46_25225	0.27	-1.9
5,386,172	+		IAI46_25225	0.27	+0.5
5,386,172	+		IAI46_25225	0.27	-0.1
5,386,172	+		IAI46_25225	0.27	+0.7
5,386,172	+		IAI46_25225	0.27	+0.4
5,386,172	+		IAI46_25225	0.27	+0.9
5,386,173	-		IAI46_25225	0.27	-0.3
5,386,173	-		IAI46_25225	0.27	-0.2
5,386,173	-		IAI46_25225	0.27	+0.7
5,386,173	-		IAI46_25225	0.27	-0.4
5,386,173	-		IAI46_25225	0.27	+0.6
5,386,173	-		IAI46_25225	0.27	+0.6
5,386,173	-		IAI46_25225	0.27	+0.1
5,386,183	-		IAI46_25225	0.28	+0.7
5,386,236	+		IAI46_25225	0.33	+0.0
5,386,237	-		IAI46_25225	0.33	-0.2
5,386,259	+		IAI46_25225	0.35	+0.4
5,386,317	+		IAI46_25225	0.40	+1.5
5,386,318	-		IAI46_25225	0.40	-1.3
5,386,318	-		IAI46_25225	0.40	+0.7
5,386,374	+		IAI46_25225	0.46	-0.2
5,386,374	+		IAI46_25225	0.46	+0.1
5,386,374	+		IAI46_25225	0.46	-0.2
5,386,375	-		IAI46_25225	0.46	-0.2
5,386,375	-		IAI46_25225	0.46	-0.1
5,386,394	-		IAI46_25225	0.48	+0.3
5,386,437	+		IAI46_25225	0.52	+0.1
5,386,438	-		IAI46_25225	0.52	+1.2
5,386,441	+		IAI46_25225	0.52	-0.3
5,386,441	+		IAI46_25225	0.52	+0.5
5,386,441	+		IAI46_25225	0.52	+0.7
5,386,441	+		IAI46_25225	0.52	+0.3
5,386,441	+		IAI46_25225	0.52	+0.3
5,386,442	-		IAI46_25225	0.52	+0.5
5,386,449	+		IAI46_25225	0.53	+0.5
5,386,449	+		IAI46_25225	0.53	+0.3
5,386,449	+		IAI46_25225	0.53	+0.8
5,386,450	-		IAI46_25225	0.53	-0.5
5,386,450	-		IAI46_25225	0.53	-1.6
5,386,501	-		IAI46_25225	0.58	-0.1
5,386,501	-		IAI46_25225	0.58	-0.1
5,386,501	-		IAI46_25225	0.58	+0.7
5,386,518	+		IAI46_25225	0.60	-0.2
5,386,572	+		IAI46_25225	0.65	+0.3
5,386,572	+		IAI46_25225	0.65	-0.5
5,386,573	-		IAI46_25225	0.65	+0.7
5,386,573	-		IAI46_25225	0.65	-0.0
5,386,573	-		IAI46_25225	0.65	+0.2
5,386,573	-		IAI46_25225	0.65	+0.7
5,386,595	-		IAI46_25225	0.67	+0.5
5,386,623	+		IAI46_25225	0.70	-0.6
5,386,623	+		IAI46_25225	0.70	-0.5
5,386,623	+		IAI46_25225	0.70	+0.5
5,386,623	+		IAI46_25225	0.70	+0.3
5,386,623	+		IAI46_25225	0.70	+0.1
5,386,623	+		IAI46_25225	0.70	+0.5
5,386,624	-		IAI46_25225	0.70	-0.5
5,386,624	-		IAI46_25225	0.70	+0.1
5,386,624	-		IAI46_25225	0.70	+0.4
5,386,624	-		IAI46_25225	0.70	+0.4
5,386,624	-		IAI46_25225	0.70	+0.2
5,386,624	-		IAI46_25225	0.70	+1.2
5,386,624	-		IAI46_25225	0.70	+0.1
5,386,626	+		IAI46_25225	0.70	-0.2
5,386,626	+		IAI46_25225	0.70	+0.2
5,386,626	+		IAI46_25225	0.70	-0.4
5,386,626	+		IAI46_25225	0.70	-0.2
5,386,626	+		IAI46_25225	0.70	+0.4
5,386,627	-		IAI46_25225	0.70	+0.1
5,386,627	-		IAI46_25225	0.70	+0.7
5,386,627	-		IAI46_25225	0.70	+0.1
5,386,627	-		IAI46_25225	0.70	-0.2
5,386,629	+		IAI46_25225	0.70	+0.1
5,386,629	+		IAI46_25225	0.70	+0.5
5,386,629	+		IAI46_25225	0.70	+0.8
5,386,727	+		IAI46_25225	0.79	-0.5
5,386,727	+		IAI46_25225	0.79	-0.0
5,386,727	+		IAI46_25225	0.79	+0.3
5,386,728	-		IAI46_25225	0.80	-0.2
5,386,728	-		IAI46_25225	0.80	+0.1
5,386,728	-		IAI46_25225	0.80	+0.1
5,386,762	-		IAI46_25225	0.83	+0.1
5,386,834	+		IAI46_25225	0.90	+0.7
5,386,834	+		IAI46_25225	0.90	-0.3
5,386,835	-		IAI46_25225	0.90	+0.8
5,386,835	-		IAI46_25225	0.90	-1.0
5,386,838	+				-0.9
5,386,839	-				+0.6