Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15320 and IAI46_15325 are separated by 180 nucleotides IAI46_15325 and IAI46_15330 overlap by 1 nucleotides
IAI46_15320: IAI46_15320 - N-succinylarginine dihydrolase, at 3,205,271 to 3,206,611
_15320
IAI46_15325: IAI46_15325 - succinylglutamate-semialdehyde dehydrogenase, at 3,206,792 to 3,208,264
_15325
IAI46_15330: IAI46_15330 - arginine N-succinyltransferase, at 3,208,264 to 3,209,298
_15330
Position (kb)
3206
3207
3208
3209 Strain fitness (log2 ratio)
-1
0
1 at 3205.806 kb on + strand, within IAI46_15320 at 3205.832 kb on + strand, within IAI46_15320 at 3205.833 kb on - strand, within IAI46_15320 at 3205.915 kb on + strand, within IAI46_15320 at 3205.915 kb on + strand, within IAI46_15320 at 3205.915 kb on + strand, within IAI46_15320 at 3205.916 kb on - strand, within IAI46_15320 at 3205.916 kb on - strand, within IAI46_15320 at 3206.056 kb on - strand, within IAI46_15320 at 3206.559 kb on + strand at 3206.559 kb on + strand at 3206.560 kb on - strand at 3206.654 kb on + strand at 3206.654 kb on + strand at 3206.660 kb on - strand at 3206.706 kb on + strand at 3206.707 kb on - strand at 3206.707 kb on - strand at 3206.707 kb on - strand at 3206.720 kb on + strand at 3206.720 kb on + strand at 3206.721 kb on - strand at 3206.753 kb on + strand at 3206.890 kb on - strand at 3207.054 kb on + strand, within IAI46_15325 at 3207.130 kb on - strand, within IAI46_15325 at 3207.824 kb on - strand, within IAI46_15325 at 3207.826 kb on - strand, within IAI46_15325 at 3207.902 kb on + strand, within IAI46_15325 at 3207.903 kb on - strand, within IAI46_15325 at 3207.903 kb on - strand, within IAI46_15325 at 3207.922 kb on - strand, within IAI46_15325 at 3208.241 kb on - strand at 3208.243 kb on + strand at 3208.285 kb on - strand at 3208.407 kb on - strand, within IAI46_15330 at 3208.465 kb on + strand, within IAI46_15330 at 3208.465 kb on + strand, within IAI46_15330 at 3208.466 kb on - strand, within IAI46_15330 at 3208.661 kb on + strand, within IAI46_15330 at 3208.661 kb on + strand, within IAI46_15330 at 3208.661 kb on + strand, within IAI46_15330 at 3208.662 kb on - strand, within IAI46_15330 at 3208.662 kb on - strand, within IAI46_15330 at 3208.721 kb on + strand, within IAI46_15330 at 3208.908 kb on - strand, within IAI46_15330 at 3208.929 kb on + strand, within IAI46_15330 at 3208.930 kb on - strand, within IAI46_15330 at 3208.988 kb on + strand, within IAI46_15330 at 3209.126 kb on + strand, within IAI46_15330 at 3209.197 kb on - strand at 3209.197 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 3,205,806 + IAI46_15320 0.40 -0.0 3,205,832 + IAI46_15320 0.42 +0.9 3,205,833 - IAI46_15320 0.42 -1.0 3,205,915 + IAI46_15320 0.48 -0.4 3,205,915 + IAI46_15320 0.48 +0.5 3,205,915 + IAI46_15320 0.48 +0.4 3,205,916 - IAI46_15320 0.48 -0.0 3,205,916 - IAI46_15320 0.48 +0.5 3,206,056 - IAI46_15320 0.59 -0.8 3,206,559 + -0.2 3,206,559 + +0.6 3,206,560 - +0.3 3,206,654 + +1.0 3,206,654 + -0.3 3,206,660 - -0.6 3,206,706 + -0.0 3,206,707 - +0.5 3,206,707 - +0.8 3,206,707 - +0.6 3,206,720 + -0.8 3,206,720 + -0.2 3,206,721 - +0.6 3,206,753 + -0.4 3,206,890 - +0.8 3,207,054 + IAI46_15325 0.18 +0.9 3,207,130 - IAI46_15325 0.23 +1.2 3,207,824 - IAI46_15325 0.70 -0.7 3,207,826 - IAI46_15325 0.70 -0.8 3,207,902 + IAI46_15325 0.75 +0.1 3,207,903 - IAI46_15325 0.75 +0.8 3,207,903 - IAI46_15325 0.75 +1.0 3,207,922 - IAI46_15325 0.77 +0.3 3,208,241 - -0.6 3,208,243 + -1.1 3,208,285 - -0.6 3,208,407 - IAI46_15330 0.14 -1.3 3,208,465 + IAI46_15330 0.19 -1.2 3,208,465 + IAI46_15330 0.19 +0.2 3,208,466 - IAI46_15330 0.20 -1.0 3,208,661 + IAI46_15330 0.38 +0.6 3,208,661 + IAI46_15330 0.38 +0.8 3,208,661 + IAI46_15330 0.38 +0.9 3,208,662 - IAI46_15330 0.38 -0.5 3,208,662 - IAI46_15330 0.38 -0.5 3,208,721 + IAI46_15330 0.44 -1.0 3,208,908 - IAI46_15330 0.62 +0.2 3,208,929 + IAI46_15330 0.64 +0.3 3,208,930 - IAI46_15330 0.64 +0.6 3,208,988 + IAI46_15330 0.70 +1.2 3,209,126 + IAI46_15330 0.83 -1.0 3,209,197 - +0.7 3,209,197 - +0.1
Or see this region's nucleotide sequence