Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11915 and IAI46_11920 are separated by 99 nucleotides IAI46_11920 and IAI46_11925 overlap by 4 nucleotides IAI46_11925 and IAI46_11930 are separated by 38 nucleotides
IAI46_11915: IAI46_11915 - LysR family transcriptional regulator, at 2,523,679 to 2,524,599
_11915
IAI46_11920: IAI46_11920 - chromate transporter, at 2,524,699 to 2,525,271
_11920
IAI46_11925: IAI46_11925 - chromate transporter, at 2,525,268 to 2,525,789
_11925
IAI46_11930: IAI46_11930 - AprI/Inh family metalloprotease inhibitor, at 2,525,828 to 2,526,187
_11930
Position (kb)
2524
2525
2526 Strain fitness (log2 ratio)
-1
0
1 at 2523.770 kb on + strand at 2523.971 kb on + strand, within IAI46_11915 at 2523.971 kb on + strand, within IAI46_11915 at 2523.971 kb on + strand, within IAI46_11915 at 2523.972 kb on - strand, within IAI46_11915 at 2523.972 kb on - strand, within IAI46_11915 at 2523.972 kb on - strand, within IAI46_11915 at 2523.972 kb on - strand, within IAI46_11915 at 2524.006 kb on - strand, within IAI46_11915 at 2524.345 kb on + strand, within IAI46_11915 at 2524.510 kb on + strand at 2524.824 kb on + strand, within IAI46_11920 at 2524.824 kb on + strand, within IAI46_11920 at 2524.824 kb on + strand, within IAI46_11920 at 2524.867 kb on - strand, within IAI46_11920 at 2525.006 kb on + strand, within IAI46_11920 at 2525.054 kb on + strand, within IAI46_11920 at 2525.055 kb on - strand, within IAI46_11920 at 2525.916 kb on - strand, within IAI46_11930 at 2526.038 kb on - strand, within IAI46_11930 at 2526.174 kb on - strand at 2526.179 kb on - strand at 2526.187 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 2,523,770 + +0.3 2,523,971 + IAI46_11915 0.32 +0.1 2,523,971 + IAI46_11915 0.32 -1.1 2,523,971 + IAI46_11915 0.32 +0.2 2,523,972 - IAI46_11915 0.32 +0.2 2,523,972 - IAI46_11915 0.32 +0.0 2,523,972 - IAI46_11915 0.32 +0.2 2,523,972 - IAI46_11915 0.32 +0.5 2,524,006 - IAI46_11915 0.36 +0.3 2,524,345 + IAI46_11915 0.72 -1.0 2,524,510 + -0.6 2,524,824 + IAI46_11920 0.22 +1.2 2,524,824 + IAI46_11920 0.22 -0.1 2,524,824 + IAI46_11920 0.22 +1.4 2,524,867 - IAI46_11920 0.29 +0.5 2,525,006 + IAI46_11920 0.54 +0.1 2,525,054 + IAI46_11920 0.62 +1.0 2,525,055 - IAI46_11920 0.62 +0.5 2,525,916 - IAI46_11930 0.24 -1.6 2,526,038 - IAI46_11930 0.58 +0.8 2,526,174 - -0.3 2,526,179 - +0.2 2,526,187 + -1.4
Or see this region's nucleotide sequence