Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11575 and IAI46_11580 are separated by 384 nucleotides IAI46_11580 and IAI46_11585 are separated by 100 nucleotides IAI46_11585 and IAI46_11590 overlap by 4 nucleotides
IAI46_11575: IAI46_11575 - 6-phosphofructokinase, at 2,442,052 to 2,443,032
_11575
IAI46_11580: IAI46_11580 - DeoR/GlpR transcriptional regulator, at 2,443,417 to 2,444,172
_11580
IAI46_11585: IAI46_11585 - NUDIX domain-containing protein, at 2,444,273 to 2,444,869
_11585
IAI46_11590: IAI46_11590 - NUDIX hydrolase, at 2,444,866 to 2,445,234
_11590
Position (kb)
2443
2444
2445 Strain fitness (log2 ratio)
-1
0
1 at 2442.753 kb on + strand, within IAI46_11575 at 2442.753 kb on + strand, within IAI46_11575 at 2442.754 kb on - strand, within IAI46_11575 at 2442.892 kb on - strand, within IAI46_11575 at 2443.018 kb on + strand at 2443.032 kb on + strand at 2443.034 kb on + strand at 2443.034 kb on + strand at 2443.129 kb on - strand at 2443.225 kb on + strand at 2443.398 kb on - strand at 2443.415 kb on - strand at 2443.568 kb on - strand, within IAI46_11580 at 2443.608 kb on - strand, within IAI46_11580 at 2443.608 kb on - strand, within IAI46_11580 at 2443.741 kb on - strand, within IAI46_11580 at 2443.742 kb on + strand, within IAI46_11580 at 2443.742 kb on + strand, within IAI46_11580 at 2443.743 kb on - strand, within IAI46_11580 at 2443.786 kb on + strand, within IAI46_11580 at 2444.379 kb on + strand, within IAI46_11585 at 2444.379 kb on + strand, within IAI46_11585 at 2444.461 kb on - strand, within IAI46_11585 at 2444.520 kb on + strand, within IAI46_11585 at 2444.633 kb on + strand, within IAI46_11585 at 2444.633 kb on + strand, within IAI46_11585 at 2444.634 kb on - strand, within IAI46_11585 at 2444.841 kb on + strand at 2444.904 kb on + strand, within IAI46_11590 at 2444.977 kb on + strand, within IAI46_11590 at 2444.977 kb on + strand, within IAI46_11590
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 2,442,753 + IAI46_11575 0.71 -0.9 2,442,753 + IAI46_11575 0.71 -0.0 2,442,754 - IAI46_11575 0.72 -0.1 2,442,892 - IAI46_11575 0.86 +0.7 2,443,018 + +0.7 2,443,032 + -1.2 2,443,034 + +0.1 2,443,034 + +0.4 2,443,129 - +1.3 2,443,225 + +0.7 2,443,398 - -0.3 2,443,415 - +0.5 2,443,568 - IAI46_11580 0.20 +0.3 2,443,608 - IAI46_11580 0.25 +0.2 2,443,608 - IAI46_11580 0.25 +0.5 2,443,741 - IAI46_11580 0.43 -0.5 2,443,742 + IAI46_11580 0.43 +1.0 2,443,742 + IAI46_11580 0.43 +0.5 2,443,743 - IAI46_11580 0.43 +1.0 2,443,786 + IAI46_11580 0.49 +1.5 2,444,379 + IAI46_11585 0.18 -0.3 2,444,379 + IAI46_11585 0.18 +1.0 2,444,461 - IAI46_11585 0.31 -1.5 2,444,520 + IAI46_11585 0.41 +0.6 2,444,633 + IAI46_11585 0.60 +0.7 2,444,633 + IAI46_11585 0.60 -0.7 2,444,634 - IAI46_11585 0.60 +0.2 2,444,841 + +0.9 2,444,904 + IAI46_11590 0.10 -0.2 2,444,977 + IAI46_11590 0.30 -1.2 2,444,977 + IAI46_11590 0.30 -0.3
Or see this region's nucleotide sequence