Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11505 and IAI46_11510 are separated by 361 nucleotides IAI46_11510 and IAI46_11515 are separated by 60 nucleotides
IAI46_11505: IAI46_11505 - ribulokinase, at 2,428,083 to 2,429,768
_11505
IAI46_11510: IAI46_11510 - arabinose ABC transporter substrate-binding protein, at 2,430,130 to 2,431,113
_11510
IAI46_11515: IAI46_11515 - L-arabinose ABC transporter ATP-binding protein AraG, at 2,431,174 to 2,432,709
_11515
Position (kb)
2430
2431
2432 Strain fitness (log2 ratio)
-1
0
1
2 at 2429.148 kb on + strand, within IAI46_11505 at 2429.148 kb on + strand, within IAI46_11505 at 2429.309 kb on - strand, within IAI46_11505 at 2429.589 kb on - strand, within IAI46_11505 at 2429.590 kb on + strand, within IAI46_11505 at 2429.591 kb on - strand, within IAI46_11505 at 2429.591 kb on - strand, within IAI46_11505 at 2429.591 kb on - strand, within IAI46_11505 at 2429.753 kb on + strand at 2429.790 kb on - strand at 2429.792 kb on + strand at 2429.793 kb on - strand at 2429.793 kb on - strand at 2429.808 kb on + strand at 2429.808 kb on + strand at 2429.901 kb on + strand at 2429.925 kb on + strand at 2429.925 kb on + strand at 2429.926 kb on - strand at 2429.927 kb on + strand at 2429.928 kb on - strand at 2429.935 kb on + strand at 2429.936 kb on - strand at 2430.045 kb on + strand at 2430.065 kb on + strand at 2430.177 kb on + strand at 2430.306 kb on + strand, within IAI46_11510 at 2430.496 kb on - strand, within IAI46_11510 at 2430.663 kb on + strand, within IAI46_11510 at 2430.943 kb on + strand, within IAI46_11510 at 2430.961 kb on - strand, within IAI46_11510 at 2430.979 kb on + strand, within IAI46_11510 at 2431.023 kb on - strand at 2431.111 kb on + strand at 2431.173 kb on + strand at 2431.173 kb on + strand at 2431.211 kb on + strand at 2431.212 kb on - strand at 2431.212 kb on - strand at 2431.483 kb on + strand, within IAI46_11515 at 2431.483 kb on + strand, within IAI46_11515 at 2431.600 kb on + strand, within IAI46_11515 at 2431.600 kb on + strand, within IAI46_11515 at 2431.665 kb on - strand, within IAI46_11515 at 2431.765 kb on + strand, within IAI46_11515 at 2431.766 kb on - strand, within IAI46_11515 at 2431.766 kb on - strand, within IAI46_11515 at 2431.766 kb on - strand, within IAI46_11515 at 2431.766 kb on - strand, within IAI46_11515 at 2431.766 kb on - strand, within IAI46_11515 at 2431.835 kb on - strand, within IAI46_11515 at 2431.835 kb on - strand, within IAI46_11515
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 2,429,148 + IAI46_11505 0.63 +0.0 2,429,148 + IAI46_11505 0.63 +0.4 2,429,309 - IAI46_11505 0.73 +0.9 2,429,589 - IAI46_11505 0.89 +1.8 2,429,590 + IAI46_11505 0.89 +0.2 2,429,591 - IAI46_11505 0.89 +0.2 2,429,591 - IAI46_11505 0.89 -0.2 2,429,591 - IAI46_11505 0.89 +0.8 2,429,753 + +0.3 2,429,790 - -1.4 2,429,792 + -0.5 2,429,793 - +0.4 2,429,793 - +0.6 2,429,808 + +0.5 2,429,808 + -0.2 2,429,901 + -0.8 2,429,925 + -0.8 2,429,925 + +1.5 2,429,926 - +0.1 2,429,927 + -0.3 2,429,928 - -0.3 2,429,935 + +0.1 2,429,936 - +0.0 2,430,045 + +0.2 2,430,065 + +0.6 2,430,177 + +0.4 2,430,306 + IAI46_11510 0.18 +0.8 2,430,496 - IAI46_11510 0.37 +1.5 2,430,663 + IAI46_11510 0.54 +1.3 2,430,943 + IAI46_11510 0.83 +0.6 2,430,961 - IAI46_11510 0.84 +0.2 2,430,979 + IAI46_11510 0.86 +0.0 2,431,023 - -0.5 2,431,111 + +0.3 2,431,173 + -0.2 2,431,173 + +1.0 2,431,211 + +1.2 2,431,212 - -0.4 2,431,212 - -0.9 2,431,483 + IAI46_11515 0.20 -0.1 2,431,483 + IAI46_11515 0.20 -0.1 2,431,600 + IAI46_11515 0.28 +1.0 2,431,600 + IAI46_11515 0.28 -0.3 2,431,665 - IAI46_11515 0.32 +0.2 2,431,765 + IAI46_11515 0.38 +0.6 2,431,766 - IAI46_11515 0.39 +0.8 2,431,766 - IAI46_11515 0.39 -0.4 2,431,766 - IAI46_11515 0.39 +1.1 2,431,766 - IAI46_11515 0.39 +0.5 2,431,766 - IAI46_11515 0.39 +0.2 2,431,835 - IAI46_11515 0.43 -0.4 2,431,835 - IAI46_11515 0.43 -0.8
Or see this region's nucleotide sequence