Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11010 and IAI46_11015 are separated by 399 nucleotides IAI46_11015 and IAI46_11020 overlap by 14 nucleotides IAI46_11020 and IAI46_11025 overlap by 1 nucleotides
IAI46_11010: IAI46_11010 - vitamin B12 ABC transporter ATP-binding protein BtuD, at 2,325,656 to 2,326,411
_11010
IAI46_11015: IAI46_11015 - UDP-4-amino-4-deoxy-L-arabinose aminotransferase, at 2,326,811 to 2,327,965
_11015
IAI46_11020: IAI46_11020 - undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase, at 2,327,952 to 2,328,932
_11020
IAI46_11025: IAI46_11025 - bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA, at 2,328,932 to 2,330,914
_11025
Position (kb)
2326
2327
2328 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2325.875 kb on + strand, within IAI46_11010 at 2325.880 kb on - strand, within IAI46_11010 at 2326.063 kb on - strand, within IAI46_11010 at 2326.183 kb on - strand, within IAI46_11010 at 2326.185 kb on + strand, within IAI46_11010 at 2326.185 kb on + strand, within IAI46_11010 at 2326.465 kb on - strand at 2326.468 kb on + strand at 2326.667 kb on - strand at 2326.702 kb on + strand at 2326.714 kb on + strand at 2326.770 kb on + strand at 2326.771 kb on - strand at 2326.811 kb on - strand at 2326.878 kb on + strand at 2327.182 kb on + strand, within IAI46_11015 at 2327.182 kb on + strand, within IAI46_11015 at 2327.198 kb on + strand, within IAI46_11015 at 2327.198 kb on + strand, within IAI46_11015 at 2327.511 kb on - strand, within IAI46_11015 at 2327.517 kb on - strand, within IAI46_11015 at 2327.590 kb on + strand, within IAI46_11015 at 2327.609 kb on + strand, within IAI46_11015 at 2327.807 kb on + strand, within IAI46_11015 at 2328.054 kb on - strand, within IAI46_11020 at 2328.081 kb on - strand, within IAI46_11020 at 2328.120 kb on - strand, within IAI46_11020 at 2328.183 kb on + strand, within IAI46_11020 at 2328.183 kb on + strand, within IAI46_11020 at 2328.183 kb on + strand, within IAI46_11020 at 2328.184 kb on - strand, within IAI46_11020 at 2328.386 kb on + strand, within IAI46_11020 at 2328.533 kb on + strand, within IAI46_11020 at 2328.536 kb on + strand, within IAI46_11020 at 2328.605 kb on + strand, within IAI46_11020 at 2328.831 kb on + strand, within IAI46_11020 at 2328.832 kb on - strand, within IAI46_11020 at 2328.842 kb on + strand at 2328.874 kb on - strand at 2328.914 kb on + strand at 2328.940 kb on + strand at 2328.945 kb on + strand at 2328.945 kb on + strand at 2328.953 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 2,325,875 + IAI46_11010 0.29 +1.0 2,325,880 - IAI46_11010 0.30 -0.3 2,326,063 - IAI46_11010 0.54 +0.9 2,326,183 - IAI46_11010 0.70 -0.6 2,326,185 + IAI46_11010 0.70 -2.2 2,326,185 + IAI46_11010 0.70 -0.5 2,326,465 - +0.3 2,326,468 + +0.3 2,326,667 - -0.6 2,326,702 + -1.3 2,326,714 + -0.6 2,326,770 + +0.9 2,326,771 - +0.9 2,326,811 - +0.5 2,326,878 + -0.2 2,327,182 + IAI46_11015 0.32 +0.2 2,327,182 + IAI46_11015 0.32 -0.1 2,327,198 + IAI46_11015 0.34 +0.6 2,327,198 + IAI46_11015 0.34 -0.9 2,327,511 - IAI46_11015 0.61 +0.4 2,327,517 - IAI46_11015 0.61 +1.1 2,327,590 + IAI46_11015 0.67 +0.4 2,327,609 + IAI46_11015 0.69 -0.6 2,327,807 + IAI46_11015 0.86 +0.5 2,328,054 - IAI46_11020 0.10 -1.8 2,328,081 - IAI46_11020 0.13 +0.1 2,328,120 - IAI46_11020 0.17 -0.4 2,328,183 + IAI46_11020 0.24 +0.1 2,328,183 + IAI46_11020 0.24 +0.4 2,328,183 + IAI46_11020 0.24 +1.1 2,328,184 - IAI46_11020 0.24 +1.1 2,328,386 + IAI46_11020 0.44 +0.3 2,328,533 + IAI46_11020 0.59 +1.1 2,328,536 + IAI46_11020 0.60 +1.4 2,328,605 + IAI46_11020 0.67 -0.5 2,328,831 + IAI46_11020 0.90 +0.9 2,328,832 - IAI46_11020 0.90 +0.6 2,328,842 + +1.1 2,328,874 - -0.7 2,328,914 + +2.3 2,328,940 + +1.5 2,328,945 + +0.5 2,328,945 + +0.2 2,328,953 + +1.5
Or see this region's nucleotide sequence