Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10785 and IAI46_10790 are separated by 244 nucleotides IAI46_10790 and IAI46_10795 are separated by 95 nucleotides IAI46_10795 and IAI46_10800 are separated by 19 nucleotides
IAI46_10785: IAI46_10785 - membrane integrity lipid transport subunit YebS, at 2,280,077 to 2,281,324
_10785
IAI46_10790: IAI46_10790 - GAF domain-containing protein, at 2,281,569 to 2,282,066
_10790
IAI46_10795: IAI46_10795 - RNA chaperone ProQ, at 2,282,162 to 2,282,872
_10795
IAI46_10800: IAI46_10800 - carboxy terminal-processing peptidase, at 2,282,892 to 2,284,928
_10800
Position (kb)
2282
2283 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2281.229 kb on - strand at 2281.342 kb on + strand at 2281.342 kb on + strand at 2281.342 kb on + strand at 2281.343 kb on - strand at 2281.344 kb on + strand at 2281.344 kb on + strand at 2281.366 kb on + strand at 2281.495 kb on - strand at 2281.502 kb on + strand at 2281.503 kb on - strand at 2281.503 kb on - strand at 2281.523 kb on + strand at 2281.553 kb on + strand at 2281.557 kb on - strand at 2281.564 kb on - strand at 2281.597 kb on + strand at 2281.598 kb on - strand at 2281.860 kb on - strand, within IAI46_10790 at 2281.880 kb on + strand, within IAI46_10790 at 2282.043 kb on + strand at 2282.087 kb on + strand at 2282.104 kb on + strand at 2282.104 kb on + strand at 2282.105 kb on - strand at 2282.105 kb on - strand at 2282.105 kb on - strand at 2282.105 kb on - strand at 2282.148 kb on - strand at 2282.176 kb on + strand at 2282.188 kb on + strand at 2282.191 kb on + strand at 2282.192 kb on - strand at 2282.352 kb on - strand, within IAI46_10795 at 2282.369 kb on + strand, within IAI46_10795 at 2282.375 kb on + strand, within IAI46_10795 at 2282.719 kb on + strand, within IAI46_10795 at 2282.783 kb on - strand, within IAI46_10795 at 2282.811 kb on + strand at 2282.811 kb on + strand at 2282.949 kb on + strand at 2282.996 kb on + strand at 2283.035 kb on - strand at 2283.120 kb on - strand, within IAI46_10800 at 2283.130 kb on - strand, within IAI46_10800 at 2283.137 kb on + strand, within IAI46_10800 at 2283.137 kb on + strand, within IAI46_10800 at 2283.137 kb on + strand, within IAI46_10800 at 2283.237 kb on + strand, within IAI46_10800 at 2283.238 kb on - strand, within IAI46_10800 at 2283.270 kb on + strand, within IAI46_10800 at 2283.276 kb on + strand, within IAI46_10800 at 2283.573 kb on + strand, within IAI46_10800 at 2283.663 kb on + strand, within IAI46_10800 at 2283.663 kb on + strand, within IAI46_10800 at 2283.664 kb on - strand, within IAI46_10800 at 2283.664 kb on - strand, within IAI46_10800 at 2283.759 kb on - strand, within IAI46_10800
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 2,281,229 - -0.3 2,281,342 + +1.1 2,281,342 + +1.2 2,281,342 + -1.3 2,281,343 - +1.3 2,281,344 + -1.3 2,281,344 + +1.3 2,281,366 + -0.5 2,281,495 - -0.3 2,281,502 + -0.1 2,281,503 - -0.1 2,281,503 - +0.8 2,281,523 + -0.8 2,281,553 + +0.6 2,281,557 - -0.6 2,281,564 - +0.9 2,281,597 + +0.2 2,281,598 - +0.0 2,281,860 - IAI46_10790 0.58 -0.3 2,281,880 + IAI46_10790 0.62 -0.6 2,282,043 + +0.1 2,282,087 + +0.5 2,282,104 + -0.6 2,282,104 + -0.3 2,282,105 - -0.5 2,282,105 - -0.5 2,282,105 - -0.8 2,282,105 - -1.8 2,282,148 - +0.9 2,282,176 + -0.5 2,282,188 + +0.9 2,282,191 + +0.9 2,282,192 - -0.8 2,282,352 - IAI46_10795 0.27 -0.5 2,282,369 + IAI46_10795 0.29 -0.5 2,282,375 + IAI46_10795 0.30 +1.0 2,282,719 + IAI46_10795 0.78 +0.4 2,282,783 - IAI46_10795 0.87 -0.8 2,282,811 + +0.4 2,282,811 + +0.1 2,282,949 + -1.9 2,282,996 + +0.0 2,283,035 - -0.3 2,283,120 - IAI46_10800 0.11 +0.8 2,283,130 - IAI46_10800 0.12 -0.2 2,283,137 + IAI46_10800 0.12 -0.3 2,283,137 + IAI46_10800 0.12 +0.5 2,283,137 + IAI46_10800 0.12 +1.9 2,283,237 + IAI46_10800 0.17 -0.7 2,283,238 - IAI46_10800 0.17 -0.5 2,283,270 + IAI46_10800 0.19 +0.2 2,283,276 + IAI46_10800 0.19 -0.9 2,283,573 + IAI46_10800 0.33 +0.2 2,283,663 + IAI46_10800 0.38 -0.4 2,283,663 + IAI46_10800 0.38 +0.1 2,283,664 - IAI46_10800 0.38 -2.1 2,283,664 - IAI46_10800 0.38 -0.6 2,283,759 - IAI46_10800 0.43 +0.8
Or see this region's nucleotide sequence