Strain Fitness in Serratia liquefaciens MT49 around IAI46_08090

Experiment: Cobalt chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cobalt chloride 80 uM, aerobic
1,714,841	+		IAI46_08085	0.46	-0.2
1,714,872	+		IAI46_08085	0.48	+1.4
1,714,888	+		IAI46_08085	0.50	+0.7
1,714,888	+		IAI46_08085	0.50	+0.6
1,714,889	-		IAI46_08085	0.50	+2.0
1,714,893	+		IAI46_08085	0.50	-0.6
1,714,893	+		IAI46_08085	0.50	+1.2
1,714,893	+		IAI46_08085	0.50	+0.3
1,714,894	-		IAI46_08085	0.50	+0.2
1,714,894	-		IAI46_08085	0.50	+1.0
1,714,903	+		IAI46_08085	0.51	-0.3
1,714,903	+		IAI46_08085	0.51	+0.2
1,714,903	+		IAI46_08085	0.51	+0.4
1,714,903	+		IAI46_08085	0.51	-0.7
1,714,903	+		IAI46_08085	0.51	+0.5
1,714,904	-		IAI46_08085	0.51	+0.8
1,714,910	+		IAI46_08085	0.51	+0.6
1,714,910	+		IAI46_08085	0.51	+0.3
1,714,937	+		IAI46_08085	0.54	+0.2
1,714,956	+		IAI46_08085	0.55	+0.1
1,714,993	+		IAI46_08085	0.58	-0.4
1,715,020	+		IAI46_08085	0.60	+0.3
1,715,021	-		IAI46_08085	0.60	-0.7
1,715,029	-		IAI46_08085	0.61	+0.7
1,715,062	+		IAI46_08085	0.63	+0.6
1,715,067	-		IAI46_08085	0.64	+0.0
1,715,070	-		IAI46_08085	0.64	-0.6
1,715,070	-		IAI46_08085	0.64	+1.0
1,715,074	+		IAI46_08085	0.64	-0.4
1,715,101	+		IAI46_08085	0.67	+1.3
1,715,105	+		IAI46_08085	0.67	+0.3
1,715,105	+		IAI46_08085	0.67	-0.1
1,715,105	+		IAI46_08085	0.67	+0.5
1,715,105	+		IAI46_08085	0.67	+0.3
1,715,106	-		IAI46_08085	0.67	+0.1
1,715,106	-		IAI46_08085	0.67	+1.0
1,715,106	-		IAI46_08085	0.67	-0.5
1,715,106	-		IAI46_08085	0.67	+0.8
1,715,122	+		IAI46_08085	0.68	-0.0
1,715,123	-		IAI46_08085	0.68	-0.5
1,715,130	-		IAI46_08085	0.69	-0.3
1,715,157	+		IAI46_08085	0.71	+1.1
1,715,157	+		IAI46_08085	0.71	-0.5
1,715,223	+		IAI46_08085	0.76	+0.4
1,715,224	-		IAI46_08085	0.76	-0.5
1,715,310	+		IAI46_08085	0.83	+0.5
1,715,327	+		IAI46_08085	0.84	+1.3
1,715,392	-		IAI46_08085	0.90	-0.1
1,715,452	-				-0.1
1,715,496	+				+0.5
1,715,496	+				+0.0
1,715,525	-				-0.7
1,715,533	+				-0.9
1,715,534	-				-0.1
1,715,534	-				+0.4
1,715,536	+				-0.0
1,715,536	+				-0.3
1,715,537	-				+1.4
1,715,790	+				-0.2
1,715,791	-				+1.8
1,715,806	+				+1.0
1,715,875	+				-0.6
1,715,891	-				+0.3
1,715,891	-				+0.5
1,715,898	+				-0.7
1,715,898	+				-0.6
1,715,975	-				+0.0
1,716,079	-				+0.8
1,716,107	-		IAI46_08090	0.11	+0.2
1,716,175	+		IAI46_08090	0.13	-1.5
1,716,175	+		IAI46_08090	0.13	+0.4
1,716,176	-		IAI46_08090	0.13	+3.4
1,716,193	+		IAI46_08090	0.14	+1.2
1,716,210	+		IAI46_08090	0.14	+0.1
1,716,210	+		IAI46_08090	0.14	+0.5
1,716,211	-		IAI46_08090	0.14	+0.1
1,716,214	+		IAI46_08090	0.14	+0.1
1,716,215	-		IAI46_08090	0.14	-0.2
1,716,287	+		IAI46_08090	0.17	-0.7
1,716,287	+		IAI46_08090	0.17	+0.9
1,716,346	+		IAI46_08090	0.19	+0.2
1,716,347	-		IAI46_08090	0.19	+1.8
1,716,389	-		IAI46_08090	0.20	-0.3
1,716,605	-		IAI46_08090	0.27	-0.4
1,716,609	-		IAI46_08090	0.27	-0.0
1,716,638	-		IAI46_08090	0.28	+4.0
1,716,680	+		IAI46_08090	0.30	-0.6
1,716,681	-		IAI46_08090	0.30	+0.8
1,716,681	-		IAI46_08090	0.30	+1.3
1,716,821	+		IAI46_08090	0.35	-1.3
1,716,857	-		IAI46_08090	0.36	-0.0
1,716,878	+		IAI46_08090	0.36	-0.7
1,716,995	-		IAI46_08090	0.40	-0.8
1,717,060	+		IAI46_08090	0.43	+0.3
1,717,063	+		IAI46_08090	0.43	+0.9
1,717,088	-		IAI46_08090	0.43	+0.8
1,717,156	+		IAI46_08090	0.46	-0.1
1,717,258	+		IAI46_08090	0.49	-0.2
1,717,282	+		IAI46_08090	0.50	-1.0
1,717,282	+		IAI46_08090	0.50	+0.3
1,717,283	-		IAI46_08090	0.50	-0.3
1,717,298	-		IAI46_08090	0.51	-1.7
1,717,358	-		IAI46_08090	0.53	-0.2
1,717,653	-		IAI46_08090	0.62	-0.4
1,717,709	-		IAI46_08090	0.64	+0.1
1,717,737	+		IAI46_08090	0.65	-0.0
1,717,738	-		IAI46_08090	0.65	-0.3
1,717,738	-		IAI46_08090	0.65	-0.2
1,717,745	+		IAI46_08090	0.65	-0.5
1,717,853	+		IAI46_08090	0.69	+0.5
1,717,914	-		IAI46_08090	0.71	+0.1
1,717,914	-		IAI46_08090	0.71	+0.3
1,717,955	+		IAI46_08090	0.72	+1.8
1,717,956	-		IAI46_08090	0.73	-0.1
1,717,956	-		IAI46_08090	0.73	+1.3
1,718,008	-		IAI46_08090	0.74	+0.4
1,718,073	-		IAI46_08090	0.76	+1.9
1,718,081	-		IAI46_08090	0.77	+0.5
1,718,081	-		IAI46_08090	0.77	-0.7
1,718,081	-		IAI46_08090	0.77	+0.8
1,718,081	-		IAI46_08090	0.77	-1.6
1,718,084	-		IAI46_08090	0.77	+1.4
1,718,136	+		IAI46_08090	0.79	+0.2
1,718,136	+		IAI46_08090	0.79	+0.3
1,718,144	-		IAI46_08090	0.79	+0.5
1,718,156	-		IAI46_08090	0.79	+1.2
1,718,156	-		IAI46_08090	0.79	-0.3
1,718,173	-		IAI46_08090	0.80	+0.5
1,718,189	-		IAI46_08090	0.80	-0.8
1,718,371	+		IAI46_08090	0.86	+0.5
1,718,372	-		IAI46_08090	0.86	-0.2
1,718,438	+		IAI46_08090	0.89	-0.0
1,718,439	-		IAI46_08090	0.89	+0.8
1,718,463	+		IAI46_08090	0.89	+0.0
1,718,464	-		IAI46_08090	0.90	+0.2
1,718,574	+				+0.0
1,718,575	-				+0.8
1,718,655	-				+0.6
1,718,689	-				+0.5
1,718,689	-				+0.4
1,718,691	+				+0.1
1,718,697	-				-0.2
1,718,697	-				+1.1
1,718,707	+				+0.4
1,718,733	-				+1.0
1,718,738	+				+0.8
1,718,765	+				+0.8
1,718,766	-				-0.6
1,718,766	-				+0.5
1,718,766	-				+0.8
1,718,777	-				-1.3
1,718,803	+				-0.1
1,718,803	+				+0.6
1,718,804	-				+0.3
1,718,804	-				+0.5
1,718,958	-				+0.4
1,718,964	+				+1.4
1,719,062	-				-0.3
1,719,064	-				-0.9
1,719,064	-				+0.7
1,719,076	+				-0.3
1,719,159	+				+1.5
1,719,160	-				-0.1
1,719,186	+				+1.0
1,719,228	+				+0.3
1,719,229	-				+1.8
1,719,312	+				+0.3
1,719,322	+				+0.8
1,719,379	+				+0.4
1,719,425	-				-0.7
1,719,425	-				+0.7
1,719,425	-				+0.3
1,719,475	-				+1.1
1,719,476	+				+0.4
1,719,525	+				-0.7
1,719,528	+				+0.0
1,719,536	+				+0.3
1,719,556	+				-0.2
1,719,556	+				+0.8
1,719,556	+				+1.1
1,719,572	-				+0.1
1,719,609	-				-0.7
1,719,627	+		IAI46_08095	0.11	+0.1
1,719,664	+		IAI46_08095	0.13	-0.6
1,719,665	-		IAI46_08095	0.13	+0.9
1,719,665	-		IAI46_08095	0.13	-1.9
1,719,732	+		IAI46_08095	0.17	-0.3