Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03560 and IAI46_03565 are separated by 226 nucleotides IAI46_03565 and IAI46_03570 overlap by 1 nucleotides IAI46_03570 and IAI46_03575 are separated by 1 nucleotides IAI46_03575 and IAI46_03580 are separated by 129 nucleotides
IAI46_03560: IAI46_03560 - hypothetical protein, at 770,475 to 770,723
_03560
IAI46_03565: IAI46_03565 - TRIC cation channel family protein, at 770,950 to 771,564
_03565
IAI46_03570: IAI46_03570 - vitamin B12 ABC transporter substrate-binding protein BtuF, at 771,564 to 772,370
_03570
IAI46_03575: IAI46_03575 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, at 772,372 to 773,073
_03575
IAI46_03580: IAI46_03580 - dGTPase, at 773,203 to 774,720
_03580
Position (kb) 771
772
773 Strain fitness (log2 ratio) -1
0
1
2 at 770.607 kb on + strand, within IAI46_03560 at 770.608 kb on - strand, within IAI46_03560 at 770.608 kb on - strand, within IAI46_03560 at 770.608 kb on - strand, within IAI46_03560 at 770.618 kb on + strand, within IAI46_03560 at 770.619 kb on - strand, within IAI46_03560 at 770.619 kb on - strand, within IAI46_03560 at 770.619 kb on - strand, within IAI46_03560 at 770.619 kb on - strand, within IAI46_03560 at 770.626 kb on - strand, within IAI46_03560 at 770.668 kb on + strand, within IAI46_03560 at 770.692 kb on - strand, within IAI46_03560 at 770.692 kb on - strand, within IAI46_03560 at 770.703 kb on + strand at 770.704 kb on - strand at 770.704 kb on - strand at 770.704 kb on - strand at 770.708 kb on + strand at 770.725 kb on - strand at 770.725 kb on - strand at 770.725 kb on - strand at 770.753 kb on + strand at 770.754 kb on - strand at 770.861 kb on + strand at 770.862 kb on - strand at 770.864 kb on + strand at 770.878 kb on + strand at 770.900 kb on + strand at 770.900 kb on + strand at 770.901 kb on - strand at 771.013 kb on + strand, within IAI46_03565 at 771.085 kb on + strand, within IAI46_03565 at 771.085 kb on + strand, within IAI46_03565 at 771.086 kb on - strand, within IAI46_03565 at 771.102 kb on + strand, within IAI46_03565 at 771.102 kb on + strand, within IAI46_03565 at 771.202 kb on - strand, within IAI46_03565 at 771.202 kb on - strand, within IAI46_03565 at 771.214 kb on + strand, within IAI46_03565 at 771.215 kb on - strand, within IAI46_03565 at 771.215 kb on - strand, within IAI46_03565 at 771.243 kb on + strand, within IAI46_03565 at 771.243 kb on + strand, within IAI46_03565 at 771.243 kb on + strand, within IAI46_03565 at 771.244 kb on - strand, within IAI46_03565 at 771.244 kb on - strand, within IAI46_03565 at 771.306 kb on + strand, within IAI46_03565 at 771.307 kb on - strand, within IAI46_03565 at 771.347 kb on - strand, within IAI46_03565 at 771.509 kb on - strand at 771.543 kb on + strand at 771.544 kb on - strand at 771.916 kb on + strand, within IAI46_03570 at 771.916 kb on + strand, within IAI46_03570 at 771.917 kb on - strand, within IAI46_03570 at 771.917 kb on - strand, within IAI46_03570 at 772.023 kb on - strand, within IAI46_03570 at 772.034 kb on + strand, within IAI46_03570 at 772.207 kb on + strand, within IAI46_03570 at 772.208 kb on - strand, within IAI46_03570 at 772.258 kb on + strand, within IAI46_03570 at 772.258 kb on + strand, within IAI46_03570 at 772.259 kb on - strand, within IAI46_03570 at 772.274 kb on + strand, within IAI46_03570 at 772.330 kb on - strand at 772.330 kb on - strand at 773.112 kb on - strand at 773.112 kb on - strand at 773.112 kb on - strand at 773.116 kb on + strand at 773.116 kb on + strand at 773.116 kb on + strand at 773.117 kb on - strand at 773.138 kb on + strand at 773.139 kb on - strand at 773.150 kb on + strand at 773.151 kb on - strand at 773.151 kb on - strand at 773.151 kb on - strand at 773.169 kb on - strand at 773.220 kb on + strand at 773.220 kb on + strand at 773.278 kb on + strand at 773.279 kb on - strand at 773.285 kb on + strand at 773.285 kb on + strand at 773.285 kb on + strand at 773.285 kb on + strand at 773.286 kb on - strand at 773.286 kb on - strand at 773.286 kb on - strand at 773.286 kb on - strand at 773.286 kb on - strand at 773.286 kb on - strand at 773.316 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 770,607 + IAI46_03560 0.53 -0.3 770,608 - IAI46_03560 0.53 -0.6 770,608 - IAI46_03560 0.53 -0.7 770,608 - IAI46_03560 0.53 -0.7 770,618 + IAI46_03560 0.57 +0.4 770,619 - IAI46_03560 0.58 +0.4 770,619 - IAI46_03560 0.58 +0.2 770,619 - IAI46_03560 0.58 +0.4 770,619 - IAI46_03560 0.58 -0.7 770,626 - IAI46_03560 0.61 -0.1 770,668 + IAI46_03560 0.78 +0.9 770,692 - IAI46_03560 0.87 -0.8 770,692 - IAI46_03560 0.87 -0.3 770,703 + +0.6 770,704 - +0.2 770,704 - -0.1 770,704 - -0.8 770,708 + -0.0 770,725 - -0.1 770,725 - +0.5 770,725 - -0.2 770,753 + +0.1 770,754 - -0.0 770,861 + -0.0 770,862 - +0.2 770,864 + +0.3 770,878 + +0.5 770,900 + +1.0 770,900 + +0.3 770,901 - -0.6 771,013 + IAI46_03565 0.10 +1.1 771,085 + IAI46_03565 0.22 -0.7 771,085 + IAI46_03565 0.22 +0.1 771,086 - IAI46_03565 0.22 +0.3 771,102 + IAI46_03565 0.25 +0.7 771,102 + IAI46_03565 0.25 -0.3 771,202 - IAI46_03565 0.41 +0.2 771,202 - IAI46_03565 0.41 +0.2 771,214 + IAI46_03565 0.43 +1.3 771,215 - IAI46_03565 0.43 +0.1 771,215 - IAI46_03565 0.43 +0.2 771,243 + IAI46_03565 0.48 +0.7 771,243 + IAI46_03565 0.48 -0.6 771,243 + IAI46_03565 0.48 +0.3 771,244 - IAI46_03565 0.48 -0.2 771,244 - IAI46_03565 0.48 +0.6 771,306 + IAI46_03565 0.58 +0.2 771,307 - IAI46_03565 0.58 +0.9 771,347 - IAI46_03565 0.65 -0.4 771,509 - -0.1 771,543 + +0.5 771,544 - -0.7 771,916 + IAI46_03570 0.44 -0.1 771,916 + IAI46_03570 0.44 +0.2 771,917 - IAI46_03570 0.44 -0.2 771,917 - IAI46_03570 0.44 -0.7 772,023 - IAI46_03570 0.57 -0.4 772,034 + IAI46_03570 0.58 -0.6 772,207 + IAI46_03570 0.80 -1.0 772,208 - IAI46_03570 0.80 +1.1 772,258 + IAI46_03570 0.86 +0.2 772,258 + IAI46_03570 0.86 +0.4 772,259 - IAI46_03570 0.86 -0.3 772,274 + IAI46_03570 0.88 +0.2 772,330 - +0.6 772,330 - +1.1 773,112 - +0.3 773,112 - +2.5 773,112 - +0.7 773,116 + +1.3 773,116 + -0.4 773,116 + +0.4 773,117 - +0.4 773,138 + +0.8 773,139 - -0.1 773,150 + -0.7 773,151 - -0.1 773,151 - +0.0 773,151 - -0.7 773,169 - +1.1 773,220 + +0.7 773,220 + +0.1 773,278 + +0.8 773,279 - +0.3 773,285 + +0.5 773,285 + +0.6 773,285 + +0.3 773,285 + +0.7 773,286 - +0.4 773,286 - -1.1 773,286 - -0.9 773,286 - +0.5 773,286 - -0.2 773,286 - +0.3 773,316 + +0.0
Or see this region's nucleotide sequence