Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03230 and IAI46_03235 are separated by 39 nucleotides IAI46_03235 and IAI46_03240 are separated by 2 nucleotides IAI46_03240 and IAI46_03245 are separated by 12 nucleotides
IAI46_03230: IAI46_03230 - PhoX family phosphatase, at 693,712 to 695,601
_03230
IAI46_03235: IAI46_03235 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH, at 695,641 to 696,492
_03235
IAI46_03240: IAI46_03240 - Co2+/Mg2+ efflux protein ApaG, at 696,495 to 696,872
_03240
IAI46_03245: IAI46_03245 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA, at 696,885 to 697,703
_03245
Position (kb) 695
696
697 Strain fitness (log2 ratio) -2
-1
0
1
2 at 694.715 kb on - strand, within IAI46_03230 at 694.715 kb on - strand, within IAI46_03230 at 694.747 kb on + strand, within IAI46_03230 at 694.747 kb on + strand, within IAI46_03230 at 694.747 kb on + strand, within IAI46_03230 at 694.747 kb on + strand, within IAI46_03230 at 694.747 kb on + strand, within IAI46_03230 at 694.748 kb on - strand, within IAI46_03230 at 694.749 kb on + strand, within IAI46_03230 at 694.750 kb on - strand, within IAI46_03230 at 694.750 kb on - strand, within IAI46_03230 at 694.753 kb on + strand, within IAI46_03230 at 694.753 kb on + strand, within IAI46_03230 at 694.753 kb on + strand, within IAI46_03230 at 694.753 kb on + strand, within IAI46_03230 at 694.753 kb on + strand, within IAI46_03230 at 694.753 kb on + strand, within IAI46_03230 at 694.754 kb on - strand, within IAI46_03230 at 694.754 kb on - strand, within IAI46_03230 at 694.754 kb on - strand, within IAI46_03230 at 694.823 kb on + strand, within IAI46_03230 at 694.823 kb on + strand, within IAI46_03230 at 694.823 kb on + strand, within IAI46_03230 at 694.823 kb on + strand, within IAI46_03230 at 694.824 kb on - strand, within IAI46_03230 at 694.824 kb on - strand, within IAI46_03230 at 694.824 kb on - strand, within IAI46_03230 at 694.825 kb on + strand, within IAI46_03230 at 694.825 kb on + strand, within IAI46_03230 at 694.825 kb on + strand, within IAI46_03230 at 694.826 kb on - strand, within IAI46_03230 at 694.826 kb on - strand, within IAI46_03230 at 694.826 kb on - strand, within IAI46_03230 at 694.826 kb on - strand, within IAI46_03230 at 695.188 kb on - strand, within IAI46_03230 at 695.188 kb on - strand, within IAI46_03230 at 695.191 kb on + strand, within IAI46_03230 at 695.251 kb on - strand, within IAI46_03230 at 695.266 kb on - strand, within IAI46_03230 at 695.266 kb on - strand, within IAI46_03230 at 695.266 kb on - strand, within IAI46_03230 at 695.288 kb on + strand, within IAI46_03230 at 695.288 kb on + strand, within IAI46_03230 at 695.288 kb on + strand, within IAI46_03230 at 695.298 kb on + strand, within IAI46_03230 at 695.299 kb on - strand, within IAI46_03230 at 695.335 kb on + strand, within IAI46_03230 at 695.335 kb on + strand, within IAI46_03230 at 695.336 kb on - strand, within IAI46_03230 at 695.354 kb on - strand, within IAI46_03230 at 695.418 kb on + strand at 695.455 kb on - strand at 695.455 kb on - strand at 695.460 kb on + strand at 695.470 kb on + strand at 695.471 kb on - strand at 695.492 kb on + strand at 695.493 kb on - strand at 695.493 kb on - strand at 695.493 kb on - strand at 695.493 kb on - strand at 695.535 kb on + strand at 695.569 kb on - strand at 695.600 kb on - strand at 695.600 kb on - strand at 695.642 kb on + strand at 695.642 kb on + strand at 695.642 kb on + strand at 695.643 kb on - strand at 695.662 kb on + strand at 695.663 kb on - strand at 695.705 kb on + strand at 695.706 kb on - strand at 695.831 kb on + strand, within IAI46_03235 at 695.831 kb on + strand, within IAI46_03235 at 695.913 kb on + strand, within IAI46_03235 at 696.026 kb on + strand, within IAI46_03235 at 696.026 kb on + strand, within IAI46_03235 at 696.027 kb on - strand, within IAI46_03235 at 696.027 kb on - strand, within IAI46_03235 at 696.317 kb on - strand, within IAI46_03235 at 696.317 kb on - strand, within IAI46_03235 at 696.341 kb on + strand, within IAI46_03235 at 696.355 kb on + strand, within IAI46_03235 at 696.356 kb on - strand, within IAI46_03235 at 696.356 kb on - strand, within IAI46_03235 at 696.437 kb on - strand at 696.478 kb on - strand at 696.482 kb on + strand at 696.483 kb on - strand at 696.483 kb on - strand at 696.483 kb on - strand at 696.492 kb on + strand at 696.493 kb on - strand at 696.493 kb on - strand at 696.493 kb on - strand at 696.578 kb on - strand, within IAI46_03240 at 696.628 kb on + strand, within IAI46_03240 at 696.628 kb on + strand, within IAI46_03240 at 696.779 kb on + strand, within IAI46_03240 at 696.779 kb on + strand, within IAI46_03240 at 696.779 kb on + strand, within IAI46_03240 at 696.780 kb on - strand, within IAI46_03240 at 696.780 kb on - strand, within IAI46_03240 at 696.780 kb on - strand, within IAI46_03240 at 696.781 kb on + strand, within IAI46_03240 at 696.782 kb on - strand, within IAI46_03240 at 696.794 kb on - strand, within IAI46_03240 at 696.794 kb on - strand, within IAI46_03240 at 696.794 kb on - strand, within IAI46_03240 at 696.829 kb on + strand, within IAI46_03240 at 696.830 kb on - strand, within IAI46_03240 at 696.830 kb on - strand, within IAI46_03240 at 696.840 kb on + strand at 696.841 kb on - strand at 696.841 kb on - strand at 696.848 kb on + strand at 696.849 kb on - strand at 696.849 kb on - strand at 696.852 kb on + strand at 696.852 kb on + strand at 696.853 kb on - strand at 696.853 kb on - strand at 696.880 kb on - strand at 696.880 kb on - strand at 696.886 kb on + strand at 696.887 kb on - strand at 697.290 kb on - strand, within IAI46_03245
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 694,715 - IAI46_03230 0.53 +0.6 694,715 - IAI46_03230 0.53 -0.2 694,747 + IAI46_03230 0.55 +0.1 694,747 + IAI46_03230 0.55 +0.4 694,747 + IAI46_03230 0.55 -0.1 694,747 + IAI46_03230 0.55 -2.3 694,747 + IAI46_03230 0.55 +0.2 694,748 - IAI46_03230 0.55 -0.0 694,749 + IAI46_03230 0.55 +0.0 694,750 - IAI46_03230 0.55 +0.9 694,750 - IAI46_03230 0.55 +0.3 694,753 + IAI46_03230 0.55 +0.2 694,753 + IAI46_03230 0.55 -0.1 694,753 + IAI46_03230 0.55 -0.3 694,753 + IAI46_03230 0.55 -0.6 694,753 + IAI46_03230 0.55 +0.6 694,753 + IAI46_03230 0.55 +0.1 694,754 - IAI46_03230 0.55 -0.4 694,754 - IAI46_03230 0.55 -0.3 694,754 - IAI46_03230 0.55 +0.6 694,823 + IAI46_03230 0.59 -0.6 694,823 + IAI46_03230 0.59 +1.3 694,823 + IAI46_03230 0.59 +0.4 694,823 + IAI46_03230 0.59 +0.2 694,824 - IAI46_03230 0.59 -0.1 694,824 - IAI46_03230 0.59 -1.0 694,824 - IAI46_03230 0.59 -0.3 694,825 + IAI46_03230 0.59 +1.0 694,825 + IAI46_03230 0.59 -0.0 694,825 + IAI46_03230 0.59 +1.0 694,826 - IAI46_03230 0.59 -0.1 694,826 - IAI46_03230 0.59 -0.3 694,826 - IAI46_03230 0.59 +0.7 694,826 - IAI46_03230 0.59 +0.3 695,188 - IAI46_03230 0.78 -1.2 695,188 - IAI46_03230 0.78 +1.2 695,191 + IAI46_03230 0.78 +2.7 695,251 - IAI46_03230 0.81 +0.9 695,266 - IAI46_03230 0.82 -0.0 695,266 - IAI46_03230 0.82 +0.4 695,266 - IAI46_03230 0.82 +0.2 695,288 + IAI46_03230 0.83 +0.3 695,288 + IAI46_03230 0.83 +0.3 695,288 + IAI46_03230 0.83 +0.4 695,298 + IAI46_03230 0.84 +0.2 695,299 - IAI46_03230 0.84 -0.4 695,335 + IAI46_03230 0.86 +0.3 695,335 + IAI46_03230 0.86 -0.5 695,336 - IAI46_03230 0.86 +0.5 695,354 - IAI46_03230 0.87 +0.2 695,418 + -0.5 695,455 - +0.3 695,455 - -0.1 695,460 + -0.3 695,470 + -0.2 695,471 - +0.9 695,492 + -0.2 695,493 - -0.4 695,493 - -0.1 695,493 - -0.1 695,493 - +0.4 695,535 + +0.5 695,569 - -0.4 695,600 - -0.5 695,600 - -0.7 695,642 + -0.0 695,642 + -0.3 695,642 + +0.0 695,643 - -0.1 695,662 + +1.7 695,663 - -0.2 695,705 + +1.0 695,706 - +0.5 695,831 + IAI46_03235 0.22 +0.2 695,831 + IAI46_03235 0.22 +0.8 695,913 + IAI46_03235 0.32 +0.2 696,026 + IAI46_03235 0.45 +1.7 696,026 + IAI46_03235 0.45 +0.7 696,027 - IAI46_03235 0.45 +0.1 696,027 - IAI46_03235 0.45 +1.2 696,317 - IAI46_03235 0.79 -1.1 696,317 - IAI46_03235 0.79 +1.3 696,341 + IAI46_03235 0.82 +0.7 696,355 + IAI46_03235 0.84 -0.4 696,356 - IAI46_03235 0.84 +0.8 696,356 - IAI46_03235 0.84 +0.2 696,437 - +0.4 696,478 - -0.1 696,482 + +0.5 696,483 - +0.6 696,483 - +0.7 696,483 - +0.9 696,492 + +0.2 696,493 - +0.2 696,493 - +0.9 696,493 - -0.1 696,578 - IAI46_03240 0.22 +1.4 696,628 + IAI46_03240 0.35 +0.7 696,628 + IAI46_03240 0.35 +1.0 696,779 + IAI46_03240 0.75 -0.3 696,779 + IAI46_03240 0.75 +0.2 696,779 + IAI46_03240 0.75 -0.1 696,780 - IAI46_03240 0.75 +0.8 696,780 - IAI46_03240 0.75 +0.3 696,780 - IAI46_03240 0.75 +0.3 696,781 + IAI46_03240 0.76 +0.8 696,782 - IAI46_03240 0.76 -0.2 696,794 - IAI46_03240 0.79 -0.5 696,794 - IAI46_03240 0.79 +1.0 696,794 - IAI46_03240 0.79 +0.1 696,829 + IAI46_03240 0.88 -0.7 696,830 - IAI46_03240 0.89 +0.1 696,830 - IAI46_03240 0.89 -0.0 696,840 + +0.9 696,841 - -0.4 696,841 - +1.6 696,848 + +0.9 696,849 - +0.6 696,849 - +0.4 696,852 + +0.6 696,852 + -0.7 696,853 - -0.2 696,853 - +0.2 696,880 - +0.8 696,880 - +0.2 696,886 + -0.1 696,887 - +1.1 697,290 - IAI46_03245 0.49 -0.4
Or see this region's nucleotide sequence