Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_02430 and IAI46_02435 are separated by 298 nucleotides IAI46_02435 and IAI46_02440 are separated by 548 nucleotides IAI46_02440 and IAI46_02445 are separated by 36 nucleotides
IAI46_02430: IAI46_02430 - hypothetical protein, at 520,946 to 522,694
_02430
IAI46_02435: IAI46_02435 - hypothetical protein, at 522,993 to 523,673
_02435
IAI46_02440: IAI46_02440 - hypothetical protein, at 524,222 to 524,506
_02440
IAI46_02445: IAI46_02445 - hypothetical protein, at 524,543 to 525,268
_02445
Position (kb) 522
523
524 Strain fitness (log2 ratio) -2
-1
0
1 at 522.062 kb on + strand, within IAI46_02430 at 522.401 kb on + strand, within IAI46_02430 at 522.458 kb on - strand, within IAI46_02430 at 522.626 kb on + strand at 522.862 kb on + strand at 522.889 kb on + strand at 522.993 kb on - strand at 523.131 kb on + strand, within IAI46_02435 at 523.468 kb on + strand, within IAI46_02435 at 523.616 kb on - strand at 523.621 kb on + strand at 523.622 kb on - strand at 523.719 kb on + strand at 523.720 kb on - strand at 523.816 kb on - strand at 523.838 kb on + strand at 523.926 kb on - strand at 523.956 kb on - strand at 524.187 kb on - strand at 524.220 kb on - strand at 524.220 kb on - strand at 524.220 kb on - strand at 524.332 kb on + strand, within IAI46_02440 at 524.405 kb on - strand, within IAI46_02440
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 522,062 + IAI46_02430 0.64 +0.7 522,401 + IAI46_02430 0.83 +0.4 522,458 - IAI46_02430 0.86 -0.1 522,626 + -0.3 522,862 + -0.4 522,889 + +0.4 522,993 - -0.3 523,131 + IAI46_02435 0.20 +0.9 523,468 + IAI46_02435 0.70 +0.5 523,616 - -0.2 523,621 + +0.5 523,622 - +0.2 523,719 + -0.1 523,720 - +0.4 523,816 - -0.7 523,838 + +0.5 523,926 - +0.1 523,956 - +0.2 524,187 - +0.7 524,220 - +0.2 524,220 - +0.5 524,220 - -2.0 524,332 + IAI46_02440 0.39 -0.0 524,405 - IAI46_02440 0.64 -0.5
Or see this region's nucleotide sequence