Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4233 and Echvi_4234 are separated by 3 nucleotides Echvi_4234 and Echvi_4235 overlap by 25 nucleotides
Echvi_4233: Echvi_4233 - Glycosyltransferase, at 5,076,732 to 5,077,943
_4233
Echvi_4234: Echvi_4234 - Predicted membrane protein, at 5,077,947 to 5,079,185
_4234
Echvi_4235: Echvi_4235 - Glycosyltransferase, at 5,079,161 to 5,080,153
_4235
Position (kb)
5077
5078
5079
5080 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5076.960 kb on + strand, within Echvi_4233 at 5076.982 kb on + strand, within Echvi_4233 at 5076.982 kb on + strand, within Echvi_4233 at 5076.983 kb on - strand, within Echvi_4233 at 5076.983 kb on - strand, within Echvi_4233 at 5077.146 kb on + strand, within Echvi_4233 at 5077.153 kb on + strand, within Echvi_4233 at 5077.154 kb on - strand, within Echvi_4233 at 5077.169 kb on + strand, within Echvi_4233 at 5077.169 kb on + strand, within Echvi_4233 at 5077.170 kb on - strand, within Echvi_4233 at 5077.173 kb on + strand, within Echvi_4233 at 5077.173 kb on + strand, within Echvi_4233 at 5077.174 kb on - strand, within Echvi_4233 at 5077.205 kb on + strand, within Echvi_4233 at 5077.285 kb on + strand, within Echvi_4233 at 5077.286 kb on - strand, within Echvi_4233 at 5077.312 kb on - strand, within Echvi_4233 at 5077.343 kb on + strand, within Echvi_4233 at 5077.344 kb on - strand, within Echvi_4233 at 5077.559 kb on + strand, within Echvi_4233 at 5077.559 kb on + strand, within Echvi_4233 at 5077.560 kb on - strand, within Echvi_4233 at 5077.560 kb on - strand, within Echvi_4233 at 5077.560 kb on - strand, within Echvi_4233 at 5077.560 kb on - strand, within Echvi_4233 at 5077.615 kb on + strand at 5077.615 kb on + strand, within Echvi_4233 at 5077.616 kb on - strand, within Echvi_4233 at 5077.819 kb on - strand, within Echvi_4233 at 5077.977 kb on - strand at 5077.977 kb on - strand at 5078.200 kb on - strand, within Echvi_4234 at 5078.310 kb on + strand, within Echvi_4234 at 5078.311 kb on - strand, within Echvi_4234 at 5078.311 kb on - strand, within Echvi_4234 at 5078.371 kb on - strand, within Echvi_4234 at 5078.437 kb on - strand, within Echvi_4234 at 5078.514 kb on + strand, within Echvi_4234 at 5078.586 kb on + strand, within Echvi_4234 at 5078.991 kb on - strand, within Echvi_4234 at 5078.996 kb on - strand, within Echvi_4234 at 5079.091 kb on - strand at 5079.091 kb on - strand at 5079.208 kb on + strand at 5079.302 kb on - strand, within Echvi_4235 at 5079.302 kb on - strand, within Echvi_4235 at 5079.360 kb on - strand, within Echvi_4235 at 5079.373 kb on + strand, within Echvi_4235 at 5079.374 kb on - strand, within Echvi_4235 at 5079.385 kb on - strand, within Echvi_4235 at 5079.440 kb on + strand, within Echvi_4235 at 5079.441 kb on - strand, within Echvi_4235 at 5079.441 kb on - strand, within Echvi_4235 at 5079.461 kb on + strand, within Echvi_4235 at 5079.462 kb on - strand, within Echvi_4235 at 5079.550 kb on - strand, within Echvi_4235 at 5079.584 kb on + strand, within Echvi_4235 at 5079.584 kb on + strand, within Echvi_4235 at 5079.584 kb on + strand, within Echvi_4235 at 5079.585 kb on - strand, within Echvi_4235 at 5079.585 kb on - strand, within Echvi_4235 at 5079.585 kb on - strand, within Echvi_4235 at 5079.585 kb on - strand, within Echvi_4235 at 5079.746 kb on - strand, within Echvi_4235 at 5079.778 kb on + strand, within Echvi_4235 at 5079.778 kb on + strand, within Echvi_4235 at 5079.851 kb on + strand, within Echvi_4235 at 5079.851 kb on + strand, within Echvi_4235 at 5079.853 kb on + strand, within Echvi_4235 at 5079.864 kb on - strand, within Echvi_4235 at 5080.061 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 5,076,960 + Echvi_4233 0.19 -1.1 5,076,982 + Echvi_4233 0.21 +0.9 5,076,982 + Echvi_4233 0.21 -0.7 5,076,983 - Echvi_4233 0.21 +0.7 5,076,983 - Echvi_4233 0.21 +0.1 5,077,146 + Echvi_4233 0.34 -0.0 5,077,153 + Echvi_4233 0.35 -0.2 5,077,154 - Echvi_4233 0.35 +0.5 5,077,169 + Echvi_4233 0.36 +0.2 5,077,169 + Echvi_4233 0.36 +1.7 5,077,170 - Echvi_4233 0.36 +1.9 5,077,173 + Echvi_4233 0.36 -0.9 5,077,173 + Echvi_4233 0.36 -0.3 5,077,174 - Echvi_4233 0.36 +3.5 5,077,205 + Echvi_4233 0.39 +1.3 5,077,285 + Echvi_4233 0.46 +0.3 5,077,286 - Echvi_4233 0.46 +0.3 5,077,312 - Echvi_4233 0.48 +0.6 5,077,343 + Echvi_4233 0.50 -0.4 5,077,344 - Echvi_4233 0.50 +0.9 5,077,559 + Echvi_4233 0.68 +0.4 5,077,559 + Echvi_4233 0.68 -0.3 5,077,560 - Echvi_4233 0.68 +0.1 5,077,560 - Echvi_4233 0.68 -0.6 5,077,560 - Echvi_4233 0.68 +0.8 5,077,560 - Echvi_4233 0.68 -0.9 5,077,615 + +1.9 5,077,615 + Echvi_4233 0.73 +0.8 5,077,616 - Echvi_4233 0.73 -1.1 5,077,819 - Echvi_4233 0.90 -2.2 5,077,977 - +0.2 5,077,977 - +0.3 5,078,200 - Echvi_4234 0.20 +0.9 5,078,310 + Echvi_4234 0.29 -0.0 5,078,311 - Echvi_4234 0.29 -0.2 5,078,311 - Echvi_4234 0.29 -0.2 5,078,371 - Echvi_4234 0.34 -0.1 5,078,437 - Echvi_4234 0.40 +2.5 5,078,514 + Echvi_4234 0.46 +0.4 5,078,586 + Echvi_4234 0.52 +1.8 5,078,991 - Echvi_4234 0.84 -0.5 5,078,996 - Echvi_4234 0.85 -0.1 5,079,091 - +1.0 5,079,091 - -0.5 5,079,208 + +0.4 5,079,302 - Echvi_4235 0.14 -0.5 5,079,302 - Echvi_4235 0.14 -0.8 5,079,360 - Echvi_4235 0.20 -0.6 5,079,373 + Echvi_4235 0.21 +0.9 5,079,374 - Echvi_4235 0.21 +1.0 5,079,385 - Echvi_4235 0.23 +0.4 5,079,440 + Echvi_4235 0.28 -0.6 5,079,441 - Echvi_4235 0.28 +2.5 5,079,441 - Echvi_4235 0.28 -0.5 5,079,461 + Echvi_4235 0.30 +1.3 5,079,462 - Echvi_4235 0.30 +0.3 5,079,550 - Echvi_4235 0.39 +0.1 5,079,584 + Echvi_4235 0.43 +1.3 5,079,584 + Echvi_4235 0.43 -0.5 5,079,584 + Echvi_4235 0.43 +1.5 5,079,585 - Echvi_4235 0.43 +0.8 5,079,585 - Echvi_4235 0.43 -0.1 5,079,585 - Echvi_4235 0.43 -0.5 5,079,585 - Echvi_4235 0.43 -0.9 5,079,746 - Echvi_4235 0.59 -1.5 5,079,778 + Echvi_4235 0.62 -0.2 5,079,778 + Echvi_4235 0.62 +0.6 5,079,851 + Echvi_4235 0.69 +0.9 5,079,851 + Echvi_4235 0.69 -0.7 5,079,853 + Echvi_4235 0.70 -0.3 5,079,864 - Echvi_4235 0.71 -0.3 5,080,061 + +0.8
Or see this region's nucleotide sequence