Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3242 and Echvi_3243 are separated by 718 nucleotides Echvi_3243 and Echvi_3244 are separated by 972 nucleotides
Echvi_3242: Echvi_3242 - RteC protein., at 3,845,402 to 3,846,247
_3242
Echvi_3243: Echvi_3243 - hypothetical protein, at 3,846,966 to 3,847,331
_3243
Echvi_3244: Echvi_3244 - hypothetical protein, at 3,848,304 to 3,848,489
_3244
Position (kb)
3846
3847
3848 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3846.007 kb on - strand, within Echvi_3242 at 3846.019 kb on - strand, within Echvi_3242 at 3846.021 kb on + strand, within Echvi_3242 at 3846.026 kb on + strand, within Echvi_3242 at 3846.026 kb on + strand, within Echvi_3242 at 3846.027 kb on - strand, within Echvi_3242 at 3846.038 kb on + strand, within Echvi_3242 at 3846.038 kb on + strand, within Echvi_3242 at 3846.126 kb on - strand, within Echvi_3242 at 3846.128 kb on + strand, within Echvi_3242 at 3846.129 kb on - strand, within Echvi_3242 at 3846.129 kb on - strand, within Echvi_3242 at 3846.129 kb on - strand, within Echvi_3242 at 3846.141 kb on + strand, within Echvi_3242 at 3846.142 kb on - strand, within Echvi_3242 at 3846.290 kb on - strand at 3846.330 kb on + strand at 3846.732 kb on + strand at 3846.751 kb on + strand at 3846.751 kb on + strand at 3846.754 kb on - strand at 3846.758 kb on - strand at 3846.803 kb on - strand at 3846.808 kb on + strand at 3846.832 kb on - strand at 3846.865 kb on + strand at 3846.866 kb on - strand at 3846.866 kb on - strand at 3846.866 kb on - strand at 3846.873 kb on + strand at 3846.874 kb on - strand at 3846.918 kb on + strand at 3846.951 kb on - strand at 3846.953 kb on - strand at 3846.953 kb on - strand at 3847.025 kb on - strand, within Echvi_3243 at 3847.036 kb on + strand, within Echvi_3243 at 3847.110 kb on - strand, within Echvi_3243 at 3847.194 kb on - strand, within Echvi_3243 at 3847.299 kb on - strand at 3847.512 kb on + strand at 3847.566 kb on + strand at 3847.566 kb on + strand at 3847.574 kb on - strand at 3847.636 kb on - strand at 3847.636 kb on - strand at 3847.636 kb on - strand at 3847.636 kb on - strand at 3847.636 kb on - strand at 3847.640 kb on - strand at 3847.640 kb on - strand at 3847.785 kb on - strand at 3847.826 kb on - strand at 3848.042 kb on - strand at 3848.080 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,846,007 - Echvi_3242 0.72 -0.5 3,846,019 - Echvi_3242 0.73 -0.1 3,846,021 + Echvi_3242 0.73 -2.9 3,846,026 + Echvi_3242 0.74 +0.2 3,846,026 + Echvi_3242 0.74 +0.4 3,846,027 - Echvi_3242 0.74 +0.4 3,846,038 + Echvi_3242 0.75 -0.1 3,846,038 + Echvi_3242 0.75 +1.1 3,846,126 - Echvi_3242 0.86 +0.4 3,846,128 + Echvi_3242 0.86 -0.5 3,846,129 - Echvi_3242 0.86 -0.4 3,846,129 - Echvi_3242 0.86 +0.4 3,846,129 - Echvi_3242 0.86 -0.3 3,846,141 + Echvi_3242 0.87 -0.1 3,846,142 - Echvi_3242 0.87 -0.6 3,846,290 - -0.1 3,846,330 + -0.6 3,846,732 + +1.0 3,846,751 + -0.5 3,846,751 + -2.6 3,846,754 - -1.2 3,846,758 - -0.5 3,846,803 - -1.2 3,846,808 + +0.8 3,846,832 - +0.1 3,846,865 + -0.5 3,846,866 - +0.3 3,846,866 - +1.3 3,846,866 - -0.5 3,846,873 + -0.5 3,846,874 - -1.3 3,846,918 + +1.7 3,846,951 - -0.1 3,846,953 - -0.5 3,846,953 - +0.7 3,847,025 - Echvi_3243 0.16 +0.2 3,847,036 + Echvi_3243 0.19 -1.8 3,847,110 - Echvi_3243 0.39 -0.2 3,847,194 - Echvi_3243 0.62 -0.7 3,847,299 - +0.3 3,847,512 + +1.3 3,847,566 + -0.2 3,847,566 + +0.2 3,847,574 - -0.2 3,847,636 - -0.5 3,847,636 - -0.9 3,847,636 - +0.1 3,847,636 - -0.0 3,847,636 - +0.1 3,847,640 - +0.1 3,847,640 - +0.2 3,847,785 - +0.1 3,847,826 - -3.6 3,848,042 - -0.8 3,848,080 - +1.0
Or see this region's nucleotide sequence