Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2510

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2508 and Echvi_2509 are separated by 3 nucleotidesEchvi_2509 and Echvi_2510 are separated by 33 nucleotidesEchvi_2510 and Echvi_2511 are separated by 112 nucleotides Echvi_2508: Echvi_2508 - Indole-3-glycerol phosphate synthase, at 2,980,232 to 2,981,050 _2508 Echvi_2509: Echvi_2509 - Phosphoribosylanthranilate isomerase, at 2,981,054 to 2,981,674 _2509 Echvi_2510: Echvi_2510 - tryptophan synthase, beta subunit, at 2,981,708 to 2,982,886 _2510 Echvi_2511: Echvi_2511 - tryptophan synthase, alpha subunit, at 2,982,999 to 2,983,775 _2511 Position (kb) 2981 2982 2983Strain fitness (log2 ratio) -1 0 1at 2980.993 kb on + strandat 2980.993 kb on + strandat 2982.888 kb on + strandat 2982.902 kb on + strandat 2982.998 kb on + strandat 2983.806 kb on - strandat 2983.885 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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2,980,993 + +0.6
2,980,993 + +0.6
2,982,888 + +0.3
2,982,902 + -0.2
2,982,998 + +0.7
2,983,806 - +0.4
2,983,885 - +0.5

Or see this region's nucleotide sequence