Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2371 and Echvi_2372 are separated by 172 nucleotides Echvi_2372 and Echvi_2373 are separated by 12 nucleotides Echvi_2373 and Echvi_2374 are separated by 40 nucleotides Echvi_2374 and Echvi_2375 overlap by 8 nucleotides
Echvi_2371: Echvi_2371 - Sterol desaturase, at 2,809,004 to 2,809,975
_2371
Echvi_2372: Echvi_2372 - protein translocase, SecG subunit, at 2,810,148 to 2,810,522
_2372
Echvi_2373: Echvi_2373 - hypothetical protein, at 2,810,535 to 2,811,389
_2373
Echvi_2374: Echvi_2374 - hypothetical protein, at 2,811,430 to 2,811,966
_2374
Echvi_2375: Echvi_2375 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 2,811,959 to 2,813,260
_2375
Position (kb)
2810
2811
2812 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2809.660 kb on - strand, within Echvi_2371 at 2809.682 kb on - strand, within Echvi_2371 at 2809.682 kb on - strand, within Echvi_2371 at 2809.682 kb on - strand, within Echvi_2371 at 2809.682 kb on - strand, within Echvi_2371 at 2809.691 kb on + strand, within Echvi_2371 at 2809.691 kb on + strand, within Echvi_2371 at 2809.748 kb on + strand, within Echvi_2371 at 2809.749 kb on - strand, within Echvi_2371 at 2809.749 kb on - strand, within Echvi_2371 at 2809.749 kb on - strand, within Echvi_2371 at 2809.840 kb on - strand, within Echvi_2371 at 2809.856 kb on - strand, within Echvi_2371 at 2809.856 kb on - strand, within Echvi_2371 at 2809.861 kb on + strand, within Echvi_2371 at 2809.861 kb on + strand, within Echvi_2371 at 2809.943 kb on + strand at 2809.944 kb on - strand at 2809.944 kb on - strand at 2809.962 kb on + strand at 2809.963 kb on - strand at 2809.963 kb on - strand at 2809.976 kb on - strand at 2809.988 kb on - strand at 2809.988 kb on - strand at 2809.989 kb on + strand at 2809.989 kb on + strand at 2809.989 kb on + strand at 2809.990 kb on - strand at 2809.990 kb on - strand at 2810.010 kb on + strand at 2810.028 kb on + strand at 2810.070 kb on + strand at 2810.071 kb on - strand at 2810.612 kb on + strand at 2810.650 kb on - strand, within Echvi_2373 at 2810.673 kb on + strand, within Echvi_2373 at 2810.673 kb on + strand, within Echvi_2373 at 2810.674 kb on - strand, within Echvi_2373 at 2810.694 kb on - strand, within Echvi_2373 at 2810.733 kb on + strand, within Echvi_2373 at 2810.785 kb on - strand, within Echvi_2373 at 2810.785 kb on - strand, within Echvi_2373 at 2810.968 kb on - strand, within Echvi_2373 at 2810.968 kb on - strand, within Echvi_2373 at 2811.066 kb on - strand, within Echvi_2373 at 2811.260 kb on - strand, within Echvi_2373 at 2811.365 kb on + strand at 2811.366 kb on - strand at 2811.425 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,809,660 - Echvi_2371 0.67 -1.5 2,809,682 - Echvi_2371 0.70 -1.3 2,809,682 - Echvi_2371 0.70 -0.6 2,809,682 - Echvi_2371 0.70 -0.1 2,809,682 - Echvi_2371 0.70 -2.6 2,809,691 + Echvi_2371 0.71 -0.5 2,809,691 + Echvi_2371 0.71 -0.7 2,809,748 + Echvi_2371 0.77 -0.3 2,809,749 - Echvi_2371 0.77 -2.1 2,809,749 - Echvi_2371 0.77 -1.3 2,809,749 - Echvi_2371 0.77 -1.0 2,809,840 - Echvi_2371 0.86 +0.3 2,809,856 - Echvi_2371 0.88 +0.4 2,809,856 - Echvi_2371 0.88 -0.4 2,809,861 + Echvi_2371 0.88 +0.1 2,809,861 + Echvi_2371 0.88 -1.0 2,809,943 + -0.3 2,809,944 - +0.2 2,809,944 - -0.3 2,809,962 + +0.1 2,809,963 - -0.4 2,809,963 - -0.0 2,809,976 - -0.7 2,809,988 - +0.6 2,809,988 - +0.2 2,809,989 + +0.5 2,809,989 + +0.0 2,809,989 + +0.6 2,809,990 - +0.4 2,809,990 - -0.1 2,810,010 + +0.9 2,810,028 + -0.2 2,810,070 + -0.3 2,810,071 - +0.9 2,810,612 + -3.0 2,810,650 - Echvi_2373 0.13 -1.3 2,810,673 + Echvi_2373 0.16 -2.2 2,810,673 + Echvi_2373 0.16 -2.8 2,810,674 - Echvi_2373 0.16 -2.3 2,810,694 - Echvi_2373 0.19 -0.1 2,810,733 + Echvi_2373 0.23 -1.3 2,810,785 - Echvi_2373 0.29 -1.2 2,810,785 - Echvi_2373 0.29 -1.0 2,810,968 - Echvi_2373 0.51 -3.4 2,810,968 - Echvi_2373 0.51 -0.2 2,811,066 - Echvi_2373 0.62 -1.6 2,811,260 - Echvi_2373 0.85 -1.3 2,811,365 + -1.6 2,811,366 - -1.5 2,811,425 + -0.5
Or see this region's nucleotide sequence