Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2279

Experiment: m.b. Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cisplatin 0.025 mg/ml
2,699,329	-				+0.3
2,699,329	-				+0.0
2,699,329	-				+0.6
2,699,330	+				-0.1
2,699,330	+				-1.8
2,699,353	+		Echvi_2278	0.11	+0.5
2,699,353	+		Echvi_2278	0.11	+0.7
2,699,353	+		Echvi_2278	0.11	+0.2
2,699,353	+		Echvi_2278	0.11	+2.2
2,699,354	-		Echvi_2278	0.11	-0.2
2,699,354	-		Echvi_2278	0.11	-0.5
2,699,357	+		Echvi_2278	0.12	-0.1
2,699,357	+		Echvi_2278	0.12	+0.7
2,699,358	-		Echvi_2278	0.12	+0.0
2,699,384	+		Echvi_2278	0.14	-0.3
2,699,493	-		Echvi_2278	0.25	-0.5
2,699,516	+		Echvi_2278	0.27	-0.1
2,699,536	+		Echvi_2278	0.29	-2.5
2,699,580	+		Echvi_2278	0.33	-0.8
2,699,580	+		Echvi_2278	0.33	-0.2
2,699,596	+		Echvi_2278	0.35	+2.3
2,699,597	-		Echvi_2278	0.35	+1.3
2,699,652	+		Echvi_2278	0.40	-0.4
2,699,745	+		Echvi_2278	0.49	+0.6
2,699,746	-		Echvi_2278	0.49	-1.6
2,699,903	-		Echvi_2278	0.64	+0.2
2,699,908	+		Echvi_2278	0.64	-0.2
2,699,909	-		Echvi_2278	0.64	-0.2
2,699,909	-		Echvi_2278	0.64	-0.8
2,699,909	-		Echvi_2278	0.64	-0.1
2,699,909	-		Echvi_2278	0.64	+0.5
2,699,960	-		Echvi_2278	0.69	-0.2
2,700,016	-		Echvi_2278	0.75	+0.5
2,700,084	-		Echvi_2278	0.81	-1.3
2,700,084	-		Echvi_2278	0.81	+0.4
2,700,128	+		Echvi_2278	0.85	+1.0
2,700,128	+		Echvi_2278	0.85	-0.3
2,700,130	+		Echvi_2278	0.86	+0.2
2,700,151	+		Echvi_2278	0.88	+0.2
2,700,268	+				+0.5
2,700,278	+				-0.1
2,700,278	+				-0.4
2,700,278	+				+0.9
2,700,278	+				+0.0
2,700,278	+				-0.5
2,700,279	-				+1.3
2,700,279	-				+0.6
2,700,279	-				-1.0
2,700,279	-				+0.2
2,700,279	-				+0.7
2,700,279	-				+0.0
2,700,279	-				-2.0
2,700,279	-				-1.4
2,700,279	-				-0.7
2,700,283	-				-0.0
2,700,285	+				-0.6
2,700,285	+				-1.2
2,700,303	-				-0.1
2,700,305	-				-2.1
2,700,312	+				+0.2
2,700,312	+				-0.3
2,700,522	-		Echvi_2279	0.27	+1.1
2,700,589	-		Echvi_2279	0.35	-0.4
2,700,613	+		Echvi_2279	0.37	-0.7
2,700,613	+		Echvi_2279	0.37	+0.7
2,700,868	-		Echvi_2279	0.66	+0.6
2,700,870	+		Echvi_2279	0.67	+0.6
2,700,871	-		Echvi_2279	0.67	-0.4
2,700,871	-		Echvi_2279	0.67	+0.9
2,700,871	-		Echvi_2279	0.67	-0.1
2,700,871	-		Echvi_2279	0.67	+0.3
2,700,875	-		Echvi_2279	0.67	+1.0
2,700,967	-		Echvi_2279	0.78	-0.7
2,700,967	-		Echvi_2279	0.78	-0.1
2,700,967	-		Echvi_2279	0.78	+0.0
2,700,968	+		Echvi_2279	0.78	+1.6
2,700,968	+		Echvi_2279	0.78	+1.3
2,700,968	+		Echvi_2279	0.78	+0.3
2,700,969	-		Echvi_2279	0.78	-0.8
2,700,969	-		Echvi_2279	0.78	+2.5
2,700,969	-		Echvi_2279	0.78	-0.8
2,700,969	-		Echvi_2279	0.78	+0.9
2,701,001	+		Echvi_2279	0.82	-0.8
2,701,002	-		Echvi_2279	0.82	+0.0
2,701,221	-				-1.0
2,701,225	-				+0.1
2,701,244	+				-0.0
2,701,245	-				+0.5
2,701,313	-				-0.3
2,701,365	-		Echvi_2280	0.16	+0.0
2,701,417	+		Echvi_2280	0.27	+2.3
2,701,418	-		Echvi_2280	0.28	+0.9
2,701,419	+		Echvi_2280	0.28	-0.5
2,701,420	-		Echvi_2280	0.28	-0.1
2,701,432	+		Echvi_2280	0.31	-0.8
2,701,433	-		Echvi_2280	0.31	-0.6
2,701,513	+		Echvi_2280	0.48	+0.6
2,701,514	-		Echvi_2280	0.49	-0.3
2,701,586	+		Echvi_2280	0.64	-0.4
2,701,593	+		Echvi_2280	0.66	+1.9
2,701,754	+				-1.2
2,701,755	-				-0.1
2,701,774	+				+0.6
2,701,775	-				+0.3
2,701,781	-				-1.1
2,701,781	-				-1.5
2,701,781	-				-0.3
2,701,781	-				-0.5
2,701,899	-				-0.1
2,701,937	+				-0.4
2,701,943	+				-0.2
2,701,944	-				-0.2
2,701,951	+				-0.1
2,701,951	+				-0.6
2,701,952	-				+0.3
2,702,027	+				-0.4
2,702,044	-				-0.6
2,702,107	+		Echvi_2281	0.11	+1.1
2,702,107	+		Echvi_2281	0.11	-0.5
2,702,107	+		Echvi_2281	0.11	-0.5
2,702,108	-		Echvi_2281	0.11	-1.5
2,702,108	-		Echvi_2281	0.11	+0.0
2,702,108	-		Echvi_2281	0.11	-0.6
2,702,108	-		Echvi_2281	0.11	-2.0
2,702,111	+		Echvi_2281	0.11	+0.7
2,702,148	-		Echvi_2281	0.14	-0.8