Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1280 and Echvi_1281 overlap by 17 nucleotides Echvi_1281 and Echvi_1282 are separated by 14 nucleotides
Echvi_1280: Echvi_1280 - Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components, at 1,469,046 to 1,470,002
_1280
Echvi_1281: Echvi_1281 - hypothetical protein, at 1,469,986 to 1,470,183
_1281
Echvi_1282: Echvi_1282 - ABC-type sugar transport system, ATPase component, at 1,470,198 to 1,471,706
_1282
Position (kb)
1469
1470
1471 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1469.021 kb on + strand at 1469.021 kb on + strand at 1469.022 kb on - strand at 1469.028 kb on - strand at 1469.028 kb on - strand at 1469.038 kb on + strand at 1469.038 kb on + strand at 1469.263 kb on + strand, within Echvi_1280 at 1469.428 kb on + strand, within Echvi_1280 at 1469.428 kb on + strand, within Echvi_1280 at 1469.642 kb on + strand, within Echvi_1280 at 1469.688 kb on + strand, within Echvi_1280 at 1469.715 kb on + strand, within Echvi_1280 at 1469.942 kb on + strand at 1469.942 kb on + strand at 1469.942 kb on + strand at 1469.942 kb on + strand at 1469.942 kb on + strand at 1469.942 kb on + strand at 1469.942 kb on + strand at 1470.017 kb on + strand, within Echvi_1281 at 1470.017 kb on + strand, within Echvi_1281 at 1470.018 kb on - strand, within Echvi_1281 at 1470.037 kb on + strand, within Echvi_1281 at 1470.037 kb on + strand, within Echvi_1281 at 1470.044 kb on + strand, within Echvi_1281 at 1470.052 kb on + strand, within Echvi_1281 at 1470.052 kb on + strand, within Echvi_1281 at 1470.085 kb on + strand, within Echvi_1281 at 1470.085 kb on + strand, within Echvi_1281 at 1470.085 kb on + strand, within Echvi_1281 at 1470.106 kb on + strand, within Echvi_1281 at 1470.108 kb on + strand, within Echvi_1281 at 1470.108 kb on + strand, within Echvi_1281 at 1470.108 kb on + strand, within Echvi_1281 at 1470.108 kb on + strand, within Echvi_1281 at 1470.122 kb on - strand, within Echvi_1281 at 1470.141 kb on + strand, within Echvi_1281 at 1470.345 kb on + strand at 1470.345 kb on + strand at 1470.389 kb on + strand, within Echvi_1282 at 1470.443 kb on + strand, within Echvi_1282 at 1470.549 kb on + strand, within Echvi_1282 at 1470.597 kb on + strand, within Echvi_1282 at 1470.597 kb on + strand, within Echvi_1282 at 1470.597 kb on + strand, within Echvi_1282 at 1470.597 kb on + strand, within Echvi_1282 at 1470.598 kb on - strand, within Echvi_1282 at 1470.620 kb on + strand, within Echvi_1282 at 1470.620 kb on + strand, within Echvi_1282 at 1470.620 kb on + strand, within Echvi_1282 at 1470.620 kb on + strand, within Echvi_1282 at 1470.621 kb on - strand, within Echvi_1282 at 1470.624 kb on + strand, within Echvi_1282 at 1470.624 kb on + strand, within Echvi_1282 at 1470.818 kb on + strand, within Echvi_1282 at 1470.819 kb on - strand, within Echvi_1282 at 1471.014 kb on + strand, within Echvi_1282 at 1471.104 kb on + strand, within Echvi_1282 at 1471.127 kb on + strand, within Echvi_1282 at 1471.127 kb on + strand, within Echvi_1282 at 1471.127 kb on + strand, within Echvi_1282 at 1471.129 kb on + strand, within Echvi_1282 at 1471.129 kb on + strand, within Echvi_1282 at 1471.129 kb on + strand, within Echvi_1282 at 1471.130 kb on - strand, within Echvi_1282
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,469,021 + +0.3 1,469,021 + +0.1 1,469,022 - -1.1 1,469,028 - +0.8 1,469,028 - -1.6 1,469,038 + +0.2 1,469,038 + +0.2 1,469,263 + Echvi_1280 0.23 -2.7 1,469,428 + Echvi_1280 0.40 +0.3 1,469,428 + Echvi_1280 0.40 +0.2 1,469,642 + Echvi_1280 0.62 -0.4 1,469,688 + Echvi_1280 0.67 +1.4 1,469,715 + Echvi_1280 0.70 +1.1 1,469,942 + -1.1 1,469,942 + +0.3 1,469,942 + +0.1 1,469,942 + -0.5 1,469,942 + +0.4 1,469,942 + -1.1 1,469,942 + -0.1 1,470,017 + Echvi_1281 0.16 -1.8 1,470,017 + Echvi_1281 0.16 -1.1 1,470,018 - Echvi_1281 0.16 +1.7 1,470,037 + Echvi_1281 0.26 +0.8 1,470,037 + Echvi_1281 0.26 -0.8 1,470,044 + Echvi_1281 0.29 -2.1 1,470,052 + Echvi_1281 0.33 +1.7 1,470,052 + Echvi_1281 0.33 -0.7 1,470,085 + Echvi_1281 0.50 +0.1 1,470,085 + Echvi_1281 0.50 +0.6 1,470,085 + Echvi_1281 0.50 -0.7 1,470,106 + Echvi_1281 0.61 -0.6 1,470,108 + Echvi_1281 0.62 -1.1 1,470,108 + Echvi_1281 0.62 +0.4 1,470,108 + Echvi_1281 0.62 +0.4 1,470,108 + Echvi_1281 0.62 -1.3 1,470,122 - Echvi_1281 0.69 -0.3 1,470,141 + Echvi_1281 0.78 -0.1 1,470,345 + -0.5 1,470,345 + +0.2 1,470,389 + Echvi_1282 0.13 +1.4 1,470,443 + Echvi_1282 0.16 -0.2 1,470,549 + Echvi_1282 0.23 -0.1 1,470,597 + Echvi_1282 0.26 +0.4 1,470,597 + Echvi_1282 0.26 +0.5 1,470,597 + Echvi_1282 0.26 +0.3 1,470,597 + Echvi_1282 0.26 +0.8 1,470,598 - Echvi_1282 0.27 -0.5 1,470,620 + Echvi_1282 0.28 -0.9 1,470,620 + Echvi_1282 0.28 +0.2 1,470,620 + Echvi_1282 0.28 +0.2 1,470,620 + Echvi_1282 0.28 -0.4 1,470,621 - Echvi_1282 0.28 -0.5 1,470,624 + Echvi_1282 0.28 -0.3 1,470,624 + Echvi_1282 0.28 -0.1 1,470,818 + Echvi_1282 0.41 -1.4 1,470,819 - Echvi_1282 0.41 -0.6 1,471,014 + Echvi_1282 0.54 +0.6 1,471,104 + Echvi_1282 0.60 +0.1 1,471,127 + Echvi_1282 0.62 -1.1 1,471,127 + Echvi_1282 0.62 +0.3 1,471,127 + Echvi_1282 0.62 +0.6 1,471,129 + Echvi_1282 0.62 +1.8 1,471,129 + Echvi_1282 0.62 +0.5 1,471,129 + Echvi_1282 0.62 +0.1 1,471,130 - Echvi_1282 0.62 +3.7
Or see this region's nucleotide sequence