Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14815

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,478,354	+		CA264_14810	0.24	-0.0
3,478,362	+		CA264_14810	0.25	+1.1
3,478,363	-		CA264_14810	0.25	-0.0
3,478,397	-		CA264_14810	0.30	-1.2
3,478,397	-		CA264_14810	0.30	+0.5
3,478,397	-		CA264_14810	0.30	-0.0
3,478,400	-		CA264_14810	0.31	-0.1
3,478,479	+		CA264_14810	0.42	-0.3
3,478,484	+		CA264_14810	0.43	-0.0
3,478,491	+		CA264_14810	0.44	-0.8
3,478,492	-				-0.0
3,478,497	+		CA264_14810	0.44	+0.2
3,478,497	+		CA264_14810	0.44	+0.2
3,478,497	+		CA264_14810	0.44	-0.9
3,478,497	+		CA264_14810	0.44	+1.0
3,478,498	-		CA264_14810	0.45	-1.0
3,478,501	+		CA264_14810	0.45	-1.9
3,478,508	+		CA264_14810	0.46	+0.2
3,478,509	-		CA264_14810	0.46	-1.7
3,478,509	-		CA264_14810	0.46	-0.1
3,478,596	+		CA264_14810	0.58	-2.6
3,478,627	-		CA264_14810	0.63	-0.1
3,478,629	+		CA264_14810	0.63	-0.4
3,478,669	+		CA264_14810	0.69	-0.1
3,478,669	-		CA264_14810	0.69	-0.8
3,478,670	-		CA264_14810	0.69	-0.1
3,478,685	+		CA264_14810	0.71	+0.8
3,478,688	-		CA264_14810	0.71	+0.3
3,478,701	+		CA264_14810	0.73	-0.0
3,478,702	-		CA264_14810	0.73	+1.5
3,478,716	+		CA264_14810	0.75	-0.2
3,478,717	-		CA264_14810	0.76	-1.5
3,478,721	-		CA264_14810	0.76	-0.8
3,478,764	+		CA264_14810	0.82	+0.7
3,478,772	+		CA264_14810	0.83	+1.0
3,478,784	+		CA264_14810	0.85	-0.1
3,478,786	+		CA264_14810	0.85	+0.7
3,478,786	+		CA264_14810	0.85	+0.8
3,478,787	-		CA264_14810	0.86	-0.2
3,478,787	-		CA264_14810	0.86	-0.4
3,478,846	+				+0.5
3,478,868	+				+0.4
3,478,869	-				-0.7
3,478,871	-				-0.0
3,478,871	-				+0.5
3,478,898	-				-0.3
3,478,898	-				-0.7
3,478,901	+				-0.8
3,478,902	-				-0.5
3,478,903	+				-0.8
3,478,904	-				-0.6
3,478,904	-				+0.2
3,478,904	-				+0.2
3,478,904	-				-0.1
3,478,904	-				-0.6
3,478,904	-				-0.0
3,478,912	-				-0.9
3,478,925	-				-0.2
3,478,969	+				+0.1
3,478,969	+				-0.3
3,478,970	-				-0.9
3,478,974	-				-0.3
3,479,003	+				-0.3
3,479,012	-				+0.5
3,479,039	+				-0.2
3,479,063	-				+0.2
3,479,068	+				+0.5
3,479,088	-				+0.5
3,479,088	-				-0.3
3,479,088	-				+0.0
3,479,089	+				+0.3
3,479,089	+				-0.6
3,479,089	+				-0.2
3,479,090	-				-0.0
3,479,090	-				+0.7
3,479,101	+				-0.0
3,479,102	-				-0.9
3,479,129	-				-0.2
3,479,130	+				-0.1
3,479,131	-				+1.3
3,479,134	-				-0.0
3,479,148	-				+0.6
3,479,159	+				-0.3
3,479,174	+				-0.3
3,479,174	+				+0.4
3,479,179	+				-0.4
3,479,194	+				-0.6
3,479,194	+				+1.3
3,479,217	-				-0.5
3,479,220	+				-0.2
3,479,284	+				-0.1
3,479,284	+				+1.7
3,479,284	+				+0.6
3,479,284	+				+0.2
3,479,285	-				-1.2
3,479,285	-				-0.3
3,479,298	+				+1.2
3,479,298	+				+0.2
3,479,302	+				-0.8
3,479,302	+				-1.4
3,479,318	+				-0.6
3,479,318	+				-1.2
3,479,330	-				-0.4
3,479,340	+				-0.0
3,479,341	-				-0.5
3,479,342	+				+1.5
3,479,342	+				-0.6
3,479,342	+				+0.4
3,479,377	-		CA264_14815	0.13	-0.7
3,479,495	-		CA264_14815	0.64	-1.0
3,479,562	+				+0.2
3,479,610	+				-0.0
3,479,631	-				-0.4
3,479,664	-				+0.2
3,479,737	+				+0.0
3,479,737	+				+0.1
3,479,738	-				-0.8
3,479,765	-				+0.2
3,479,822	+		CA264_14820	0.25	-2.0
3,479,822	+		CA264_14820	0.25	-0.2
3,479,823	-		CA264_14820	0.26	+1.1
3,479,823	-		CA264_14820	0.26	-0.5
3,479,823	-		CA264_14820	0.26	-0.2
3,479,833	-		CA264_14820	0.29	-0.1
3,479,858	+		CA264_14820	0.36	+1.5
3,479,858	+		CA264_14820	0.36	-0.2
3,479,858	+		CA264_14820	0.36	+0.3
3,479,858	+		CA264_14820	0.36	-0.0
3,479,859	-		CA264_14820	0.37	-0.2
3,479,859	-		CA264_14820	0.37	+0.2
3,479,891	+		CA264_14820	0.46	-0.2
3,479,891	+		CA264_14820	0.46	+1.5
3,479,891	+		CA264_14820	0.46	-0.3
3,479,893	+		CA264_14820	0.47	+0.1
3,479,894	-		CA264_14820	0.47	-0.8
3,479,896	+		CA264_14820	0.48	-0.1
3,479,896	+		CA264_14820	0.48	+0.3
3,479,896	+		CA264_14820	0.48	+0.1
3,479,897	-		CA264_14820	0.48	+0.0
3,479,897	-		CA264_14820	0.48	+0.0
3,479,897	-		CA264_14820	0.48	-1.2
3,479,897	-		CA264_14820	0.48	+0.0
3,479,897	-		CA264_14820	0.48	+0.7
3,479,897	-		CA264_14820	0.48	+1.4
3,479,924	-		CA264_14820	0.56	+0.1
3,479,933	+		CA264_14820	0.59	-0.0
3,480,050	+				+1.1
3,480,050	+				-0.1
3,480,050	+				-0.5
3,480,051	-				+0.5
3,480,051	-				-0.5
3,480,051	-				-0.3
3,480,054	+				-0.0
3,480,054	+				+0.4
3,480,054	+				+1.1
3,480,054	+				-0.1
3,480,054	+				+1.2
3,480,055	-				-1.0
3,480,065	+				-0.0
3,480,074	+				+2.5
3,480,074	+				+0.1
3,480,074	+				+0.3
3,480,075	-				-0.3
3,480,075	-				-0.5
3,480,075	-				+0.7
3,480,075	-				+0.0
3,480,075	-				-0.3
3,480,075	-				-0.2
3,480,079	-				+0.4
3,480,151	-				-0.6
3,480,153	+				+1.0
3,480,156	+				-1.0
3,480,156	+				-1.2
3,480,157	-				+0.0
3,480,157	-				-0.1
3,480,232	-		CA264_14825	0.23	-1.2
3,480,255	+		CA264_14825	0.29	+2.5
3,480,255	+		CA264_14825	0.29	-0.2
3,480,256	-		CA264_14825	0.29	-2.0
3,480,256	-		CA264_14825	0.29	+0.0
3,480,261	-		CA264_14825	0.30	-0.2
3,480,283	+		CA264_14825	0.36	-0.1
3,480,285	+		CA264_14825	0.36	-0.2
3,480,286	-		CA264_14825	0.36	+0.1
3,480,286	-		CA264_14825	0.36	-0.5
3,480,286	-		CA264_14825	0.36	-0.1
3,480,286	-		CA264_14825	0.36	-0.2
3,480,290	+		CA264_14825	0.37	+0.9
3,480,291	-		CA264_14825	0.37	-0.0
3,480,297	+		CA264_14825	0.39	-0.0
3,480,308	+		CA264_14825	0.42	+0.3
3,480,308	+		CA264_14825	0.42	-0.3
3,480,309	-		CA264_14825	0.42	+1.2
3,480,314	+		CA264_14825	0.43	-0.5
3,480,314	+		CA264_14825	0.43	+0.4
3,480,315	-		CA264_14825	0.43	-0.5
3,480,315	-		CA264_14825	0.43	-0.3
3,480,315	-		CA264_14825	0.43	-0.3
3,480,450	+		CA264_14825	0.76	-0.2
3,480,450	+		CA264_14825	0.76	-0.2
3,480,450	+		CA264_14825	0.76	-0.4
3,480,450	+		CA264_14825	0.76	+0.6
3,480,451	-		CA264_14825	0.76	+0.5
3,480,451	-		CA264_14825	0.76	-0.5
3,480,523	+				-0.2
3,480,524	-				+1.0
3,480,524	-				-0.7
3,480,525	+				-0.6
3,480,530	-				+0.7
3,480,554	-				+0.0