Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07425

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,712,521	+				-0.6
1,712,531	+				-0.1
1,712,546	-				-0.8
1,712,549	+				-0.6
1,712,550	-				-2.8
1,712,552	+				-0.9
1,712,553	-				-0.9
1,712,578	-				-0.6
1,712,598	+				-0.3
1,712,624	+				-0.3
1,712,662	+				-1.4
1,712,688	+				-0.6
1,712,688	+				-0.8
1,712,689	-				-0.8
1,712,690	+				-0.9
1,712,691	-				-1.2
1,712,720	+				-0.8
1,712,720	+				-2.2
1,712,772	+				+1.6
1,712,772	+				-0.1
1,712,786	+				+2.1
1,712,846	+				-0.8
1,712,847	-				-1.8
1,712,847	-				+0.3
1,712,851	+				-2.4
1,712,866	+				-0.4
1,712,891	-				-1.1
1,712,922	+				-0.5
1,712,922	+				-0.3
1,712,927	+				+0.7
1,712,928	-				-0.6
1,712,931	+				+0.6
1,712,933	+				+0.9
1,712,934	-				-0.4
1,712,944	-				+0.6
1,713,072	-		CA264_07425	0.18	-0.5
1,713,090	-		CA264_07425	0.19	-0.6
1,713,198	+		CA264_07425	0.29	-0.5
1,713,198	+		CA264_07425	0.29	+0.2
1,713,199	-		CA264_07425	0.29	-0.9
1,713,202	+		CA264_07425	0.29	+0.1
1,713,202	+		CA264_07425	0.29	-0.4
1,713,203	-		CA264_07425	0.29	+0.6
1,713,266	+		CA264_07425	0.35	+1.0
1,713,266	+		CA264_07425	0.35	-0.4
1,713,266	+		CA264_07425	0.35	+0.2
1,713,267	-		CA264_07425	0.35	+0.1
1,713,324	+		CA264_07425	0.40	-0.5
1,713,324	+		CA264_07425	0.40	-0.4
1,713,324	-		CA264_07425	0.40	+0.0
1,713,473	-		CA264_07425	0.53	-0.4
1,713,473	-		CA264_07425	0.53	-0.9
1,713,534	+		CA264_07425	0.58	+0.4
1,713,534	+		CA264_07425	0.58	-0.3
1,713,534	+		CA264_07425	0.58	+1.1
1,713,535	-		CA264_07425	0.58	+0.0
1,713,536	+		CA264_07425	0.59	-0.2
1,713,536	+		CA264_07425	0.59	-0.3
1,713,537	-		CA264_07425	0.59	+0.4
1,713,551	-		CA264_07425	0.60	-0.3
1,713,551	-		CA264_07425	0.60	-0.1
1,713,551	-		CA264_07425	0.60	-1.0
1,713,551	-		CA264_07425	0.60	+1.4
1,713,569	+		CA264_07425	0.61	-1.9
1,713,569	+		CA264_07425	0.61	-1.4
1,713,580	-		CA264_07425	0.62	-0.6
1,713,581	+		CA264_07425	0.62	-0.1
1,713,581	+		CA264_07425	0.62	-0.1
1,713,581	+		CA264_07425	0.62	-0.3
1,713,581	+		CA264_07425	0.62	+0.6
1,713,582	-		CA264_07425	0.63	-1.8
1,713,582	-		CA264_07425	0.63	+0.3
1,713,582	-		CA264_07425	0.63	-0.7
1,713,582	-		CA264_07425	0.63	-0.3
1,713,585	+		CA264_07425	0.63	-1.1
1,713,588	+		CA264_07425	0.63	-0.4
1,713,588	+		CA264_07425	0.63	-0.5
1,713,589	-		CA264_07425	0.63	+1.1
1,713,589	-		CA264_07425	0.63	+0.9
1,713,589	-		CA264_07425	0.63	-0.7
1,713,589	-		CA264_07425	0.63	-0.1
1,713,591	+		CA264_07425	0.63	-0.6
1,713,591	+		CA264_07425	0.63	-1.2
1,713,599	-		CA264_07425	0.64	-1.3
1,713,649	-		CA264_07425	0.68	-0.1
1,713,677	+		CA264_07425	0.71	+0.3
1,713,677	+		CA264_07425	0.71	-0.7
1,713,677	+		CA264_07425	0.71	-0.9
1,713,677	+		CA264_07425	0.71	-0.2
1,713,678	-		CA264_07425	0.71	-0.2
1,713,678	-		CA264_07425	0.71	-0.4
1,713,678	-		CA264_07425	0.71	+0.8
1,713,693	+		CA264_07425	0.72	-0.1
1,713,694	-		CA264_07425	0.72	-1.3
1,713,694	-		CA264_07425	0.72	-1.9
1,713,752	+		CA264_07425	0.77	+0.3
1,713,756	+		CA264_07425	0.78	+0.1
1,713,756	+		CA264_07425	0.78	-0.4
1,713,756	+		CA264_07425	0.78	-0.8
1,713,756	+		CA264_07425	0.78	+0.8
1,713,756	+		CA264_07425	0.78	+1.1
1,713,756	+		CA264_07425	0.78	+0.1
1,713,758	+		CA264_07425	0.78	-0.1
1,713,758	+		CA264_07425	0.78	-0.1
1,713,759	-		CA264_07425	0.78	-0.0
1,713,841	-		CA264_07425	0.85	+0.2
1,713,872	-		CA264_07425	0.88	-0.6
1,713,872	-		CA264_07425	0.88	+0.1
1,713,911	+				-0.3
1,713,912	-				-0.3
1,714,015	+				-2.0
1,714,021	+				-0.3
1,714,145	-				-0.3
1,714,151	+				-0.4
1,714,151	+				+0.1
1,714,152	-				+0.3
1,714,154	+				-0.9
1,714,155	-				+0.6
1,714,155	-				+0.7
1,714,236	-				+0.0
1,714,322	+		CA264_07430	0.13	+0.1
1,714,323	-		CA264_07430	0.13	-0.1
1,714,323	-		CA264_07430	0.13	-2.6
1,714,361	+		CA264_07430	0.16	-0.5
1,714,362	-		CA264_07430	0.16	-1.6
1,714,385	+		CA264_07430	0.17	-0.4
1,714,386	-		CA264_07430	0.17	+0.3
1,714,386	-		CA264_07430	0.17	-0.5
1,714,414	+		CA264_07430	0.19	+0.7
1,714,500	+		CA264_07430	0.25	-1.2
1,714,500	+		CA264_07430	0.25	+0.3
1,714,501	-		CA264_07430	0.25	-0.0
1,714,501	-		CA264_07430	0.25	-0.0
1,714,502	+		CA264_07430	0.25	+0.7
1,714,520	-		CA264_07430	0.27	-0.3
1,714,620	+		CA264_07430	0.34	-0.3
1,714,629	-		CA264_07430	0.34	-0.2
1,714,659	+		CA264_07430	0.37	-0.2
1,714,660	-		CA264_07430	0.37	-1.0
1,714,725	+		CA264_07430	0.41	+0.8
1,714,726	-		CA264_07430	0.41	-0.8
1,714,751	+		CA264_07430	0.43	-0.5
1,714,751	+		CA264_07430	0.43	+0.3
1,714,752	-		CA264_07430	0.43	-0.1
1,714,755	+		CA264_07430	0.43	-0.1
1,714,771	+		CA264_07430	0.44	-0.2
1,714,771	+		CA264_07430	0.44	+0.2
1,714,771	+		CA264_07430	0.44	+0.4
1,714,771	+		CA264_07430	0.44	+0.8
1,714,772	-		CA264_07430	0.45	-0.0
1,714,772	-		CA264_07430	0.45	-0.3
1,714,772	-		CA264_07430	0.45	+0.1
1,714,772	-		CA264_07430	0.45	-0.7
1,714,775	-		CA264_07430	0.45	+1.6
1,714,775	-		CA264_07430	0.45	+0.4
1,714,804	+		CA264_07430	0.47	-2.4
1,714,805	-		CA264_07430	0.47	+0.2
1,714,805	-		CA264_07430	0.47	-0.1
1,714,856	+		CA264_07430	0.50	-0.3
1,714,856	+		CA264_07430	0.50	+0.2
1,714,856	+		CA264_07430	0.50	-0.0
1,714,856	+		CA264_07430	0.50	-0.3
1,714,856	+		CA264_07430	0.50	-0.4
1,714,857	-		CA264_07430	0.51	-0.4
1,714,857	-		CA264_07430	0.51	-2.0
1,714,857	-		CA264_07430	0.51	-0.1
1,714,861	+		CA264_07430	0.51	-0.5
1,714,862	-		CA264_07430	0.51	-0.4
1,714,863	+		CA264_07430	0.51	+0.1
1,714,864	-		CA264_07430	0.51	-0.1
1,714,864	-		CA264_07430	0.51	+0.7
1,714,864	-		CA264_07430	0.51	-0.3
1,714,864	-		CA264_07430	0.51	+0.9
1,714,880	+		CA264_07430	0.52	-0.6
1,714,908	+		CA264_07430	0.54	+0.1
1,714,909	-		CA264_07430	0.54	-0.3
1,714,909	-		CA264_07430	0.54	-0.7
1,714,913	-		CA264_07430	0.55	+0.6
1,714,966	-		CA264_07430	0.58	-0.5
1,714,985	-		CA264_07430	0.60	-0.9
1,714,987	-		CA264_07430	0.60	-0.2