Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0996 and Atu0997 are separated by 104 nucleotides Atu0997 and Atu0998 are separated by 122 nucleotides Atu0998 and Atu0999 are separated by 68 nucleotides
Atu0996: Atu0996 - zinc-binding dehydrogenase, at 992,564 to 993,580
Atu0996
Atu0997: Atu0997 - hypothetical protein, at 993,685 to 994,074
Atu0997
Atu0998: Atu0998 - undecaprenyl pyrophosphate phosphatase, possible bacitracin resistance protein, at 994,197 to 995,033
Atu0998
Atu0999: Atu0999 - magnesium transport protein, at 995,102 to 996,475
Atu0999
Position (kb) 994
995
996 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 993.220 kb on + strand, within Atu0996 at 993.333 kb on + strand, within Atu0996 at 993.333 kb on + strand, within Atu0996 at 993.341 kb on - strand, within Atu0996 at 993.473 kb on - strand, within Atu0996 at 993.509 kb on + strand at 993.543 kb on + strand at 993.682 kb on - strand at 993.773 kb on + strand, within Atu0997 at 993.800 kb on - strand, within Atu0997 at 993.830 kb on + strand, within Atu0997 at 993.842 kb on + strand, within Atu0997 at 993.888 kb on + strand, within Atu0997 at 993.890 kb on - strand, within Atu0997 at 994.998 kb on + strand at 995.000 kb on + strand at 995.000 kb on + strand at 995.000 kb on + strand at 995.034 kb on + strand at 995.034 kb on + strand at 995.034 kb on + strand at 995.199 kb on - strand at 995.265 kb on - strand, within Atu0999 at 995.265 kb on - strand, within Atu0999 at 995.391 kb on - strand, within Atu0999 at 995.391 kb on - strand, within Atu0999 at 995.423 kb on - strand, within Atu0999 at 995.497 kb on + strand, within Atu0999 at 995.529 kb on + strand, within Atu0999 at 995.537 kb on - strand, within Atu0999 at 995.589 kb on - strand, within Atu0999 at 995.612 kb on + strand, within Atu0999 at 995.660 kb on + strand, within Atu0999 at 995.804 kb on + strand, within Atu0999 at 995.851 kb on + strand, within Atu0999 at 995.851 kb on + strand, within Atu0999 at 995.908 kb on - strand, within Atu0999 at 995.984 kb on + strand, within Atu0999 at 996.032 kb on + strand, within Atu0999
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 993,220 + Atu0996 0.65 -0.4 993,333 + Atu0996 0.76 -1.1 993,333 + Atu0996 0.76 +0.6 993,341 - Atu0996 0.76 -0.5 993,473 - Atu0996 0.89 -0.3 993,509 + +1.3 993,543 + +0.1 993,682 - -0.2 993,773 + Atu0997 0.23 -0.2 993,800 - Atu0997 0.29 +0.6 993,830 + Atu0997 0.37 +0.5 993,842 + Atu0997 0.40 +0.1 993,888 + Atu0997 0.52 +0.9 993,890 - Atu0997 0.53 +0.1 994,998 + +0.3 995,000 + -0.6 995,000 + +0.3 995,000 + -0.1 995,034 + -0.0 995,034 + -0.2 995,034 + +0.3 995,199 - -1.2 995,265 - Atu0999 0.12 -1.1 995,265 - Atu0999 0.12 -4.3 995,391 - Atu0999 0.21 -2.8 995,391 - Atu0999 0.21 -3.2 995,423 - Atu0999 0.23 -2.8 995,497 + Atu0999 0.29 -3.1 995,529 + Atu0999 0.31 -0.5 995,537 - Atu0999 0.32 -3.3 995,589 - Atu0999 0.35 -1.1 995,612 + Atu0999 0.37 -0.1 995,660 + Atu0999 0.41 -1.7 995,804 + Atu0999 0.51 -2.1 995,851 + Atu0999 0.55 -2.7 995,851 + Atu0999 0.55 -2.1 995,908 - Atu0999 0.59 -4.3 995,984 + Atu0999 0.64 -3.8 996,032 + Atu0999 0.68 -3.1
Or see this region's nucleotide sequence