Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS04945

Experiment: 150_nonmag_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	150_nonmag_1
1,026,493	-		AMB_RS23165	0.74	+2.8
1,026,705	+		AMB_RS23165	0.89	+0.7
1,026,705	+		AMB_RS23165	0.89	+0.6
1,026,706	-		AMB_RS23165	0.89	+1.9
1,026,706	-		AMB_RS23165	0.89	+2.3
1,026,799	-				+1.0
1,026,894	+				+0.3
1,026,894	+				+1.2
1,026,895	-				+2.7
1,026,895	-				+3.1
1,026,983	+				+2.5
1,026,983	+				+1.8
1,026,983	+				+2.9
1,027,080	+		AMB_RS04945	0.16	+0.9
1,027,080	+		AMB_RS04945	0.16	+2.5
1,027,080	+		AMB_RS04945	0.16	+2.7
1,027,080	+		AMB_RS04945	0.16	+3.1
1,027,081	-		AMB_RS04945	0.16	+2.7
1,027,081	-		AMB_RS04945	0.16	+2.7
1,027,081	-		AMB_RS04945	0.16	+0.1
1,027,081	-		AMB_RS04945	0.16	+2.2
1,027,081	-		AMB_RS04945	0.16	+2.5
1,027,081	-		AMB_RS04945	0.16	+2.0
1,027,081	-		AMB_RS04945	0.16	-0.0
1,027,116	+		AMB_RS04945	0.19	+2.2
1,027,116	+		AMB_RS04945	0.19	+1.5
1,027,117	-		AMB_RS04945	0.19	+2.5
1,027,117	-		AMB_RS04945	0.19	+2.5
1,027,117	-		AMB_RS04945	0.19	+2.0
1,027,325	+		AMB_RS04945	0.39	+3.0
1,027,333	+		AMB_RS04945	0.40	+3.8
1,027,333	+		AMB_RS04945	0.40	+2.7
1,027,334	-		AMB_RS04945	0.40	+2.5
1,027,334	-		AMB_RS04945	0.40	+2.3
1,027,421	+		AMB_RS04945	0.48	+2.4
1,027,421	+		AMB_RS04945	0.48	+2.2
1,027,422	-		AMB_RS04945	0.48	+2.1
1,027,422	-		AMB_RS04945	0.48	+2.4
1,027,422	-		AMB_RS04945	0.48	+3.4
1,027,422	-		AMB_RS04945	0.48	+0.2
1,027,466	+		AMB_RS04945	0.52	+2.4
1,027,488	+		AMB_RS04945	0.55	+3.4
1,027,488	+		AMB_RS04945	0.55	+3.5
1,027,488	+		AMB_RS04945	0.55	+3.0
1,027,488	+		AMB_RS04945	0.55	+2.5
1,027,488	+		AMB_RS04945	0.55	+2.4
1,027,488	+		AMB_RS04945	0.55	+2.5
1,027,488	+		AMB_RS04945	0.55	+2.6
1,027,488	+		AMB_RS04945	0.55	+3.2
1,027,488	+		AMB_RS04945	0.55	+2.2
1,027,488	+		AMB_RS04945	0.55	+2.1
1,027,488	+		AMB_RS04945	0.55	+3.0
1,027,488	+		AMB_RS04945	0.55	+1.5
1,027,488	+		AMB_RS04945	0.55	+1.5
1,027,488	+		AMB_RS04945	0.55	+2.2
1,027,488	+		AMB_RS04945	0.55	+2.5
1,027,488	+		AMB_RS04945	0.55	+2.2
1,027,488	+		AMB_RS04945	0.55	+1.6
1,027,488	+		AMB_RS04945	0.55	+3.1
1,027,488	+		AMB_RS04945	0.55	+2.3
1,027,488	+		AMB_RS04945	0.55	+2.8
1,027,489	-		AMB_RS04945	0.55	+2.8
1,027,489	-		AMB_RS04945	0.55	+3.0
1,027,489	-		AMB_RS04945	0.55	+2.4
1,027,489	-		AMB_RS04945	0.55	+3.5
1,027,489	-		AMB_RS04945	0.55	+2.8
1,027,489	-		AMB_RS04945	0.55	+2.9
1,027,489	-		AMB_RS04945	0.55	+2.6
1,027,489	-		AMB_RS04945	0.55	+3.0
1,027,489	-		AMB_RS04945	0.55	+2.7
1,027,489	-		AMB_RS04945	0.55	+3.2
1,027,489	-		AMB_RS04945	0.55	+2.6
1,027,489	-		AMB_RS04945	0.55	+3.0
1,027,489	-		AMB_RS04945	0.55	+0.8
1,027,489	-		AMB_RS04945	0.55	+2.8
1,027,489	-		AMB_RS04945	0.55	+2.7
1,027,489	-		AMB_RS04945	0.55	+1.8
1,027,489	-		AMB_RS04945	0.55	+2.3
1,027,489	-		AMB_RS04945	0.55	+2.9
1,027,489	-		AMB_RS04945	0.55	+4.3
1,027,489	-		AMB_RS04945	0.55	-0.0
1,027,489	-		AMB_RS04945	0.55	+2.8
1,027,489	-		AMB_RS04945	0.55	+1.9
1,027,489	-		AMB_RS04945	0.55	+3.1
1,027,489	-		AMB_RS04945	0.55	+2.5
1,027,489	-		AMB_RS04945	0.55	+2.8
1,027,489	-		AMB_RS04945	0.55	+2.0
1,027,700	+		AMB_RS04945	0.75	+2.1
1,027,744	-		AMB_RS04945	0.79	+2.0
1,027,813	-		AMB_RS04945	0.86	+3.2
1,027,813	-		AMB_RS04945	0.86	+3.4
1,027,813	-		AMB_RS04945	0.86	+3.7
1,027,813	-		AMB_RS04945	0.86	+2.4
1,027,813	-		AMB_RS04945	0.86	+4.0
1,027,813	-		AMB_RS04945	0.86	+2.7
1,027,926	+				-0.3
1,027,926	+				+1.3
1,027,926	+				-2.9
1,027,927	-				+2.8
1,027,978	+				+2.1
1,027,993	+				+0.6
1,028,005	+				+0.5
1,028,005	+				+1.4
1,028,005	+				+1.7
1,028,006	-				+1.9
1,028,006	-				+3.0
1,028,006	-				+2.6
1,028,021	+				+2.7
1,028,021	+				+2.8
1,028,021	+				+2.7
1,028,021	+				+2.8
1,028,021	+				+2.9
1,028,021	+				+2.6
1,028,021	+				+2.4
1,028,022	-				+2.7
1,028,022	-				+2.3
1,028,022	-				+2.4
1,028,022	-				+2.4
1,028,022	-				+1.3
1,028,022	-				+2.7
1,028,022	-				+2.5
1,028,022	-				+2.7
1,028,085	+		AMB_RS04950	0.29	-1.1
1,028,085	+		AMB_RS04950	0.29	+2.2
1,028,085	+		AMB_RS04950	0.29	+2.8
1,028,085	+		AMB_RS04950	0.29	+2.6
1,028,086	-		AMB_RS04950	0.29	+2.8
1,028,086	-		AMB_RS04950	0.29	+2.7
1,028,086	-		AMB_RS04950	0.29	+3.3
1,028,086	-		AMB_RS04950	0.29	+2.9
1,028,086	-		AMB_RS04950	0.29	+2.6
1,028,086	-		AMB_RS04950	0.29	+2.8
1,028,086	-		AMB_RS04950	0.29	+1.3
1,028,086	-		AMB_RS04950	0.29	+2.3
1,028,147	+		AMB_RS04950	0.55	+2.9
1,028,147	+		AMB_RS04950	0.55	+2.6
1,028,148	-		AMB_RS04950	0.55	+2.1
1,028,148	-		AMB_RS04950	0.55	+3.9
1,028,299	+				+2.9
1,028,299	+				+3.2
1,028,299	+				+1.9
1,028,299	+				+3.6
1,028,299	+				+2.0
1,028,299	+				+3.3
1,028,299	+				+2.4
1,028,299	+				+2.5
1,028,299	+				+3.7
1,028,300	-				+3.0
1,028,300	-				+3.3
1,028,300	-				+2.8
1,028,300	-				+3.2
1,028,300	-				+2.5
1,028,300	-				+2.3
1,028,362	+				+2.4
1,028,363	-				+2.5
1,028,363	-				+2.7
1,028,363	-				+2.0
1,028,363	-				+2.5
1,028,363	-				+2.7
1,028,363	-				+3.1
1,028,371	+				+3.0
1,028,371	+				+2.5
1,028,371	+				+3.0
1,028,372	-				+2.4
1,028,372	-				+2.6
1,028,372	-				+3.8
1,028,372	-				+3.3
1,028,372	-				+1.3
1,028,372	-				+2.7
1,028,439	+		AMB_RS04955	0.14	+2.2
1,028,439	+		AMB_RS04955	0.14	+2.3
1,028,439	+		AMB_RS04955	0.14	+3.2
1,028,439	+		AMB_RS04955	0.14	+1.5
1,028,439	+		AMB_RS04955	0.14	+2.5
1,028,439	+		AMB_RS04955	0.14	+3.1
1,028,439	+		AMB_RS04955	0.14	+2.9
1,028,439	+		AMB_RS04955	0.14	+2.4
1,028,439	+		AMB_RS04955	0.14	+2.6
1,028,439	+		AMB_RS04955	0.14	+2.4
1,028,439	+		AMB_RS04955	0.14	+3.0
1,028,439	+		AMB_RS04955	0.14	+2.9
1,028,439	+		AMB_RS04955	0.14	+2.6
1,028,439	+		AMB_RS04955	0.14	+2.1
1,028,440	-		AMB_RS04955	0.14	+2.8
1,028,440	-		AMB_RS04955	0.14	+2.4
1,028,440	-		AMB_RS04955	0.14	+2.7
1,028,440	-		AMB_RS04955	0.14	+3.7
1,028,440	-		AMB_RS04955	0.14	+2.9
1,028,440	-		AMB_RS04955	0.14	+2.7
1,028,440	-		AMB_RS04955	0.14	+3.1
1,028,440	-		AMB_RS04955	0.14	+1.9
1,028,592	+		AMB_RS04955	0.30	+4.1
1,028,592	+		AMB_RS04955	0.30	+2.0
1,028,593	-		AMB_RS04955	0.30	+2.8
1,028,593	-		AMB_RS04955	0.30	+3.4
1,028,703	+		AMB_RS04955	0.42	+1.3
1,028,703	+		AMB_RS04955	0.42	+2.8
1,028,703	+		AMB_RS04955	0.42	+2.7
1,028,703	+		AMB_RS04955	0.42	+3.0
1,028,703	+		AMB_RS04955	0.42	+2.8
1,028,703	+		AMB_RS04955	0.42	+2.4
1,028,703	+		AMB_RS04955	0.42	+3.3
1,028,703	+		AMB_RS04955	0.42	+3.0
1,028,703	+		AMB_RS04955	0.42	+3.0
1,028,703	+		AMB_RS04955	0.42	+3.3
1,028,703	+		AMB_RS04955	0.42	+2.5
1,028,703	+		AMB_RS04955	0.42	+1.5
1,028,703	+		AMB_RS04955	0.42	+2.6
1,028,703	+		AMB_RS04955	0.42	+2.6
1,028,703	+		AMB_RS04955	0.42	+2.7
1,028,703	+		AMB_RS04955	0.42	+2.7
1,028,703	+		AMB_RS04955	0.42	+2.5
1,028,703	+		AMB_RS04955	0.42	+2.9
1,028,703	+		AMB_RS04955	0.42	+2.8
1,028,703	+		AMB_RS04955	0.42	+2.8
1,028,704	-		AMB_RS04955	0.42	+2.4
1,028,704	-		AMB_RS04955	0.42	+2.9
1,028,704	-		AMB_RS04955	0.42	+3.0
1,028,704	-		AMB_RS04955	0.42	+2.5
1,028,704	-		AMB_RS04955	0.42	+2.7
1,028,704	-		AMB_RS04955	0.42	+2.6
1,028,704	-		AMB_RS04955	0.42	+2.7
1,028,704	-		AMB_RS04955	0.42	+1.6
1,028,704	-		AMB_RS04955	0.42	+2.7
1,028,704	-		AMB_RS04955	0.42	+2.7
1,028,704	-		AMB_RS04955	0.42	+2.7
1,028,704	-		AMB_RS04955	0.42	+2.2
1,028,704	-		AMB_RS04955	0.42	+2.9
1,028,704	-		AMB_RS04955	0.42	+3.3
1,028,704	-		AMB_RS04955	0.42	+2.8
1,028,704	-		AMB_RS04955	0.42	+2.3
1,028,704	-		AMB_RS04955	0.42	+2.6
1,028,704	-		AMB_RS04955	0.42	+3.0
1,028,704	-		AMB_RS04955	0.42	+3.5
1,028,704	-		AMB_RS04955	0.42	+1.1
1,028,709	+		AMB_RS04955	0.42	+2.4
1,028,710	-		AMB_RS04955	0.42	+3.9
1,028,710	-		AMB_RS04955	0.42	+2.8
1,028,826	+		AMB_RS04955	0.55	+2.6
1,028,826	+		AMB_RS04955	0.55	+2.7
1,028,826	+		AMB_RS04955	0.55	+2.7
1,028,826	+		AMB_RS04955	0.55	+3.0
1,028,826	+		AMB_RS04955	0.55	+2.5
1,028,826	+		AMB_RS04955	0.55	+2.7
1,028,827	-		AMB_RS04955	0.55	+3.0
1,028,827	-		AMB_RS04955	0.55	+2.5
1,028,827	-		AMB_RS04955	0.55	+2.8
1,028,916	+		AMB_RS04955	0.64	+2.8
1,028,916	+		AMB_RS04955	0.64	+2.3
1,028,917	-		AMB_RS04955	0.64	+2.5
1,028,937	-		AMB_RS04955	0.66	+2.9