Strain Fitness in Bosea sp. OAE506 around ABIE41_RS15640

Experiment: D-Glucuronic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS15630 and ABIE41_RS15635 are separated by 186 nucleotidesABIE41_RS15635 and ABIE41_RS15640 are separated by 163 nucleotides ABIE41_RS15630: ABIE41_RS15630 - deoxyribodipyrimidine photo-lyase, at 3,200,422 to 3,201,873 _RS15630 ABIE41_RS15635: ABIE41_RS15635 - tRNA-Asn, at 3,202,060 to 3,202,134 _RS15635 ABIE41_RS15640: ABIE41_RS15640 - tRNA-Cys, at 3,202,298 to 3,202,371 _RS15640 Position (kb) 3202 3203Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3201.426 kb on - strand, within ABIE41_RS15630at 3201.575 kb on + strand, within ABIE41_RS15630at 3201.576 kb on - strand, within ABIE41_RS15630at 3201.773 kb on + strandat 3201.773 kb on + strandat 3201.774 kb on - strandat 3201.774 kb on - strandat 3201.774 kb on - strandat 3201.774 kb on - strandat 3201.774 kb on - strandat 3201.774 kb on - strandat 3201.774 kb on - strandat 3202.446 kb on + strandat 3202.663 kb on + strandat 3202.691 kb on - strandat 3202.722 kb on - strandat 3202.822 kb on + strandat 3202.847 kb on - strandat 3202.847 kb on - strandat 3202.863 kb on + strandat 3202.989 kb on - strandat 3202.989 kb on - strandat 3202.989 kb on - strandat 3203.032 kb on - strandat 3203.038 kb on + strandat 3203.039 kb on - strandat 3203.066 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucuronic Acid (C)
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3,201,426 - ABIE41_RS15630 0.69 +0.1
3,201,575 + ABIE41_RS15630 0.79 +0.7
3,201,576 - ABIE41_RS15630 0.79 -1.1
3,201,773 + -2.4
3,201,773 + -1.5
3,201,774 - -0.1
3,201,774 - +1.0
3,201,774 - +3.0
3,201,774 - +0.1
3,201,774 - -1.7
3,201,774 - +0.2
3,201,774 - -0.3
3,202,446 + -1.5
3,202,663 + -1.4
3,202,691 - +1.3
3,202,722 - +1.2
3,202,822 + +0.1
3,202,847 - -0.4
3,202,847 - +0.1
3,202,863 + +0.6
3,202,989 - +0.9
3,202,989 - -0.9
3,202,989 - -0.4
3,203,032 - -1.2
3,203,038 + +0.3
3,203,039 - +1.2
3,203,066 + +0.4

Or see this region's nucleotide sequence