Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS09950

Experiment: L-Glutamine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)
1,913,487	+		ABIE40_RS09940	0.51	-1.0
1,913,631	+		ABIE40_RS09940	0.64	-1.6
1,913,632	-		ABIE40_RS09940	0.64	-1.3
1,913,838	+		ABIE40_RS09940	0.82	-0.9
1,913,838	+		ABIE40_RS09940	0.82	-1.3
1,913,838	+		ABIE40_RS09940	0.82	-1.6
1,913,839	-		ABIE40_RS09940	0.82	-1.8
1,913,839	-		ABIE40_RS09940	0.82	-2.0
1,913,839	-		ABIE40_RS09940	0.82	-1.2
1,913,839	-		ABIE40_RS09940	0.82	-1.8
1,913,839	-		ABIE40_RS09940	0.82	+0.6
1,913,925	+		ABIE40_RS09940	0.90	-0.2
1,913,926	-		ABIE40_RS09940	0.90	-2.3
1,913,926	-		ABIE40_RS09940	0.90	-2.1
1,913,926	-		ABIE40_RS09940	0.90	-2.3
1,913,926	-		ABIE40_RS09940	0.90	-1.2
1,913,986	-				+0.4
1,913,986	-				-2.6
1,914,018	-				-1.1
1,914,018	-				+2.0
1,914,020	+				-0.3
1,914,020	+				+0.1
1,914,021	-				-1.7
1,914,030	+				+0.2
1,914,031	-				-1.0
1,914,078	-				-1.2
1,914,128	+		ABIE40_RS09945	0.17	-1.4
1,914,128	+		ABIE40_RS09945	0.17	-1.4
1,914,128	+		ABIE40_RS09945	0.17	-2.8
1,914,128	+		ABIE40_RS09945	0.17	-1.2
1,914,131	+		ABIE40_RS09945	0.18	-2.2
1,914,132	-		ABIE40_RS09945	0.18	-0.0
1,914,132	-		ABIE40_RS09945	0.18	-0.6
1,914,132	-		ABIE40_RS09945	0.18	-1.8
1,914,138	+		ABIE40_RS09945	0.20	+0.6
1,914,139	-		ABIE40_RS09945	0.20	-2.1
1,914,166	+		ABIE40_RS09945	0.28	-0.0
1,914,167	-		ABIE40_RS09945	0.28	-2.6
1,914,167	-		ABIE40_RS09945	0.28	-0.7
1,914,255	+		ABIE40_RS09945	0.52	-2.5
1,914,255	+		ABIE40_RS09945	0.52	-1.8
1,914,255	+		ABIE40_RS09945	0.52	-0.8
1,914,255	+		ABIE40_RS09945	0.52	-0.2
1,914,255	+		ABIE40_RS09945	0.52	-1.6
1,914,255	+		ABIE40_RS09945	0.52	-0.4
1,914,256	-		ABIE40_RS09945	0.52	-1.6
1,914,256	-		ABIE40_RS09945	0.52	-3.7
1,914,408	+				-1.1
1,914,409	-				-1.4
1,914,426	+				-2.4
1,914,461	+				-2.3
1,914,461	+				-0.8
1,914,493	+				+0.8
1,914,523	+				-0.4
1,914,523	+				-0.5
1,914,523	+				-2.7
1,914,542	+				-2.5
1,914,542	+				-2.0
1,914,542	+				-3.4
1,914,543	-				-1.9
1,914,544	+				+1.2
1,914,544	+				-1.6
1,914,544	+				-0.7
1,914,544	+				-3.7
1,914,544	+				-1.3
1,914,545	-				-1.1
1,914,545	-				-0.1
1,914,708	-				-5.0
1,914,708	-				-1.3
1,914,773	+		ABIE40_RS09950	0.12	-1.0
1,914,773	+		ABIE40_RS09950	0.12	+0.3
1,914,774	-		ABIE40_RS09950	0.12	-0.8
1,914,774	-		ABIE40_RS09950	0.12	-0.4
1,914,775	+		ABIE40_RS09950	0.12	-2.0
1,914,775	+		ABIE40_RS09950	0.12	-1.1
1,914,776	-		ABIE40_RS09950	0.12	+1.8
1,914,827	+		ABIE40_RS09950	0.14	-2.1
1,914,828	-		ABIE40_RS09950	0.14	-0.5
1,914,828	-		ABIE40_RS09950	0.14	-3.0
1,914,987	+		ABIE40_RS09950	0.20	-2.9
1,914,988	-		ABIE40_RS09950	0.20	-3.4
1,914,988	-		ABIE40_RS09950	0.20	-1.4
1,914,988	-		ABIE40_RS09950	0.20	-2.4
1,914,988	-		ABIE40_RS09950	0.20	-0.7
1,915,091	+		ABIE40_RS09950	0.23	+1.9
1,915,292	+		ABIE40_RS09950	0.30	-1.0
1,915,292	+		ABIE40_RS09950	0.30	+0.2
1,915,292	+		ABIE40_RS09950	0.30	-0.5
1,915,293	-		ABIE40_RS09950	0.30	-3.1
1,915,293	-		ABIE40_RS09950	0.30	-2.4
1,915,293	-		ABIE40_RS09950	0.30	-1.6
1,915,293	-		ABIE40_RS09950	0.30	-1.7
1,915,293	-		ABIE40_RS09950	0.30	-2.5
1,915,408	+		ABIE40_RS09950	0.34	-2.3
1,915,408	+		ABIE40_RS09950	0.34	+0.1
1,915,478	+		ABIE40_RS09950	0.37	-0.8
1,915,478	+		ABIE40_RS09950	0.37	-1.5
1,915,478	+		ABIE40_RS09950	0.37	-2.0
1,915,478	+		ABIE40_RS09950	0.37	-0.4
1,915,478	+		ABIE40_RS09950	0.37	-0.4
1,915,478	+		ABIE40_RS09950	0.37	-1.0
1,915,479	-		ABIE40_RS09950	0.37	-2.0
1,915,479	-		ABIE40_RS09950	0.37	-0.5
1,915,479	-		ABIE40_RS09950	0.37	-2.0
1,915,479	-		ABIE40_RS09950	0.37	-1.8
1,915,574	+		ABIE40_RS09950	0.40	-1.8
1,915,574	+		ABIE40_RS09950	0.40	-3.3
1,915,575	-		ABIE40_RS09950	0.40	-1.0
1,915,663	-		ABIE40_RS09950	0.43	-2.0
1,915,796	+		ABIE40_RS09950	0.48	-1.3
1,915,797	-		ABIE40_RS09950	0.48	-1.8
1,915,832	+		ABIE40_RS09950	0.49	-2.1
1,915,886	+		ABIE40_RS09950	0.51	-1.9
1,915,887	-		ABIE40_RS09950	0.51	-2.2
1,916,144	+		ABIE40_RS09950	0.60	-2.7
1,916,144	+		ABIE40_RS09950	0.60	-2.5
1,916,145	-		ABIE40_RS09950	0.60	+0.3
1,916,145	-		ABIE40_RS09950	0.60	-0.5
1,916,145	-		ABIE40_RS09950	0.60	-0.5
1,916,171	+		ABIE40_RS09950	0.61	-1.3
1,916,171	+		ABIE40_RS09950	0.61	-1.6
1,916,171	+		ABIE40_RS09950	0.61	-1.4
1,916,172	-		ABIE40_RS09950	0.61	+0.7
1,916,172	-		ABIE40_RS09950	0.61	-2.3
1,916,172	-		ABIE40_RS09950	0.61	-0.8
1,916,172	-		ABIE40_RS09950	0.61	-3.5
1,916,172	-		ABIE40_RS09950	0.61	+1.2
1,916,172	-		ABIE40_RS09950	0.61	-2.9
1,916,172	-		ABIE40_RS09950	0.61	-3.2
1,916,176	+		ABIE40_RS09950	0.61	-1.3
1,916,176	+		ABIE40_RS09950	0.61	-2.4
1,916,177	-		ABIE40_RS09950	0.61	-1.1
1,916,340	-		ABIE40_RS09950	0.67	-1.3
1,916,372	+		ABIE40_RS09950	0.68	-1.1
1,916,372	+		ABIE40_RS09950	0.68	-1.5
1,916,450	+		ABIE40_RS09950	0.71	-0.2
1,916,451	-		ABIE40_RS09950	0.71	-2.0
1,916,451	-		ABIE40_RS09950	0.71	-1.8
1,916,705	+		ABIE40_RS09950	0.79	-1.5
1,916,705	+		ABIE40_RS09950	0.79	-1.4
1,916,706	-		ABIE40_RS09950	0.80	+0.6
1,916,706	-		ABIE40_RS09950	0.80	-0.6
1,916,706	-		ABIE40_RS09950	0.80	-2.1
1,916,743	+		ABIE40_RS09950	0.81	-1.8
1,916,743	+		ABIE40_RS09950	0.81	-1.6
1,916,771	+		ABIE40_RS09950	0.82	-1.6
1,916,771	+		ABIE40_RS09950	0.82	-2.9
1,916,771	+		ABIE40_RS09950	0.82	-0.4
1,916,771	+		ABIE40_RS09950	0.82	-2.1
1,916,771	+		ABIE40_RS09950	0.82	-1.8
1,916,771	+		ABIE40_RS09950	0.82	+0.5
1,916,771	+		ABIE40_RS09950	0.82	-2.3
1,916,772	-		ABIE40_RS09950	0.82	-0.8
1,916,772	-		ABIE40_RS09950	0.82	-3.0
1,916,772	-		ABIE40_RS09950	0.82	-0.2
1,916,772	-		ABIE40_RS09950	0.82	-2.8
1,916,772	-		ABIE40_RS09950	0.82	-0.1
1,916,772	-		ABIE40_RS09950	0.82	-1.1
1,916,774	-		ABIE40_RS09950	0.82	-3.5
1,916,774	-		ABIE40_RS09950	0.82	+1.4
1,916,799	-		ABIE40_RS09950	0.83	-1.5
1,916,799	-		ABIE40_RS09950	0.83	-2.1
1,916,799	-		ABIE40_RS09950	0.83	-3.9
1,916,810	+		ABIE40_RS09950	0.83	-0.1
1,916,810	+		ABIE40_RS09950	0.83	-1.8
1,916,810	+		ABIE40_RS09950	0.83	-2.5
1,916,810	+		ABIE40_RS09950	0.83	-1.6
1,917,194	+				+0.8
1,917,194	+				-0.2
1,917,194	+				-1.6
1,917,194	+				+0.0
1,917,194	+				-2.8
1,917,194	+				-0.2
1,917,195	-				+0.2
1,917,195	-				-0.4
1,917,195	-				-0.5
1,917,195	-				-3.7
1,917,227	+				-2.9
1,917,227	+				-1.9
1,917,227	+				-2.6
1,917,228	-				-2.2
1,917,272	+				-1.0
1,917,272	+				+0.2
1,917,272	+				+0.6
1,917,273	-				+0.5
1,917,289	-				+0.1
1,917,290	+				-0.5
1,917,291	-				-2.3
1,917,383	+				+0.6
1,917,383	+				+1.2
1,917,383	+				-0.4
1,917,384	-				+1.9
1,917,384	-				-1.8
1,917,384	-				+0.6
1,917,501	+		ABIE40_RS09955	0.10	+0.8
1,917,502	-		ABIE40_RS09955	0.10	-0.6
1,917,502	-		ABIE40_RS09955	0.10	-0.7
1,917,502	-		ABIE40_RS09955	0.10	-0.0
1,917,536	+		ABIE40_RS09955	0.16	+1.1
1,917,536	+		ABIE40_RS09955	0.16	-0.4
1,917,536	+		ABIE40_RS09955	0.16	-2.9
1,917,537	-		ABIE40_RS09955	0.17	+2.2
1,917,537	-		ABIE40_RS09955	0.17	-0.5
1,917,645	+		ABIE40_RS09955	0.36	-0.2
1,917,645	+		ABIE40_RS09955	0.36	-0.4
1,917,645	+		ABIE40_RS09955	0.36	+1.4
1,917,645	+		ABIE40_RS09955	0.36	+0.5
1,917,645	+		ABIE40_RS09955	0.36	+0.8
1,917,645	+		ABIE40_RS09955	0.36	-0.3
1,917,646	-		ABIE40_RS09955	0.36	-0.8
1,917,688	+		ABIE40_RS09955	0.43	+0.1
1,917,821	+		ABIE40_RS09955	0.67	-0.1
1,917,821	+		ABIE40_RS09955	0.67	+0.2
1,917,821	+		ABIE40_RS09955	0.67	+0.1
1,917,821	+		ABIE40_RS09955	0.67	-1.8
1,917,822	-		ABIE40_RS09955	0.67	-0.4
1,918,005	-				+0.3
1,918,121	+		ABIE40_RS09960	0.29	+0.2
1,918,121	+		ABIE40_RS09960	0.29	+0.0
1,918,121	+		ABIE40_RS09960	0.29	-0.5
1,918,121	+		ABIE40_RS09960	0.29	+0.3
1,918,122	-		ABIE40_RS09960	0.29	-2.3
1,918,122	-		ABIE40_RS09960	0.29	+2.2
1,918,122	-		ABIE40_RS09960	0.29	+0.1
1,918,122	-		ABIE40_RS09960	0.29	+1.2
1,918,122	-		ABIE40_RS09960	0.29	+1.1