Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03310 and ABID97_RS03315 overlap by 4 nucleotides ABID97_RS03315 and ABID97_RS03320 are separated by 228 nucleotides ABID97_RS03320 and ABID97_RS03325 are separated by 27 nucleotides ABID97_RS03325 and ABID97_RS03330 overlap by 4 nucleotides
ABID97_RS03310: ABID97_RS03310 - BON domain-containing protein, at 668,302 to 668,799
_RS03310
ABID97_RS03315: ABID97_RS03315 - flavin reductase family protein, at 668,796 to 669,305
_RS03315
ABID97_RS03320: ABID97_RS03320 - tripartite tricarboxylate transporter substrate binding protein, at 669,534 to 670,526
_RS03320
ABID97_RS03325: ABID97_RS03325 - SDR family oxidoreductase, at 670,554 to 671,474
_RS03325
ABID97_RS03330: ABID97_RS03330 - AMP-binding protein, at 671,471 to 674,383
_RS03330
Position (kb) 669
670
671 Strain fitness (log2 ratio) -1
0
1 at 668.543 kb on + strand, within ABID97_RS03310 at 668.550 kb on - strand, within ABID97_RS03310 at 668.642 kb on + strand, within ABID97_RS03310 at 668.642 kb on + strand, within ABID97_RS03310 at 668.642 kb on + strand, within ABID97_RS03310 at 668.643 kb on - strand, within ABID97_RS03310 at 668.643 kb on - strand, within ABID97_RS03310 at 668.643 kb on - strand, within ABID97_RS03310 at 668.815 kb on + strand at 668.816 kb on - strand at 668.816 kb on - strand at 669.341 kb on + strand at 669.341 kb on + strand at 669.810 kb on + strand, within ABID97_RS03320 at 669.810 kb on + strand, within ABID97_RS03320 at 669.876 kb on + strand, within ABID97_RS03320 at 669.876 kb on + strand, within ABID97_RS03320 at 669.876 kb on + strand, within ABID97_RS03320 at 669.876 kb on + strand, within ABID97_RS03320 at 669.876 kb on + strand, within ABID97_RS03320 at 669.877 kb on - strand, within ABID97_RS03320 at 670.014 kb on + strand, within ABID97_RS03320 at 670.014 kb on + strand, within ABID97_RS03320 at 670.014 kb on + strand, within ABID97_RS03320 at 670.015 kb on - strand, within ABID97_RS03320 at 670.101 kb on + strand, within ABID97_RS03320 at 670.102 kb on - strand, within ABID97_RS03320 at 670.461 kb on + strand at 670.462 kb on - strand at 670.462 kb on - strand at 670.462 kb on - strand at 670.524 kb on + strand at 670.525 kb on - strand at 670.920 kb on + strand, within ABID97_RS03325 at 670.920 kb on + strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.921 kb on - strand, within ABID97_RS03325 at 670.923 kb on + strand, within ABID97_RS03325 at 670.923 kb on + strand, within ABID97_RS03325 at 670.923 kb on + strand, within ABID97_RS03325 at 670.923 kb on + strand, within ABID97_RS03325 at 670.923 kb on + strand, within ABID97_RS03325 at 670.924 kb on - strand, within ABID97_RS03325
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 668,543 + ABID97_RS03310 0.48 +0.2 668,550 - ABID97_RS03310 0.50 -0.3 668,642 + ABID97_RS03310 0.68 +0.1 668,642 + ABID97_RS03310 0.68 +0.1 668,642 + ABID97_RS03310 0.68 -1.3 668,643 - ABID97_RS03310 0.68 +0.1 668,643 - ABID97_RS03310 0.68 +0.9 668,643 - ABID97_RS03310 0.68 -0.2 668,815 + -0.3 668,816 - +0.4 668,816 - -0.4 669,341 + +0.0 669,341 + +0.2 669,810 + ABID97_RS03320 0.28 +0.7 669,810 + ABID97_RS03320 0.28 +0.6 669,876 + ABID97_RS03320 0.34 -0.4 669,876 + ABID97_RS03320 0.34 +0.6 669,876 + ABID97_RS03320 0.34 -0.3 669,876 + ABID97_RS03320 0.34 -0.1 669,876 + ABID97_RS03320 0.34 -0.3 669,877 - ABID97_RS03320 0.35 -0.3 670,014 + ABID97_RS03320 0.48 -0.3 670,014 + ABID97_RS03320 0.48 -1.0 670,014 + ABID97_RS03320 0.48 +0.2 670,015 - ABID97_RS03320 0.48 +0.0 670,101 + ABID97_RS03320 0.57 -0.1 670,102 - ABID97_RS03320 0.57 -0.6 670,461 + -0.3 670,462 - +0.6 670,462 - -0.9 670,462 - +0.0 670,524 + +0.1 670,525 - -0.3 670,920 + ABID97_RS03325 0.40 -0.4 670,920 + ABID97_RS03325 0.40 -0.9 670,921 - ABID97_RS03325 0.40 -0.0 670,921 - ABID97_RS03325 0.40 -0.1 670,921 - ABID97_RS03325 0.40 -0.7 670,921 - ABID97_RS03325 0.40 -0.4 670,921 - ABID97_RS03325 0.40 -0.7 670,921 - ABID97_RS03325 0.40 -0.7 670,921 - ABID97_RS03325 0.40 -0.3 670,921 - ABID97_RS03325 0.40 -0.6 670,923 + ABID97_RS03325 0.40 +0.9 670,923 + ABID97_RS03325 0.40 +1.4 670,923 + ABID97_RS03325 0.40 -0.7 670,923 + ABID97_RS03325 0.40 -0.3 670,923 + ABID97_RS03325 0.40 -0.2 670,924 - ABID97_RS03325 0.40 -0.5
Or see this region's nucleotide sequence