Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23610 and IAI46_23615 are separated by 0 nucleotides IAI46_23615 and IAI46_23620 overlap by 1 nucleotides IAI46_23620 and IAI46_23625 are separated by 160 nucleotides
IAI46_23610: IAI46_23610 - type II toxin-antitoxin system RelE/ParE family toxin, at 5,021,373 to 5,021,650
_23610
IAI46_23615: IAI46_23615 - two-component system response regulator BtsR, at 5,021,651 to 5,022,376
_23615
IAI46_23620: IAI46_23620 - sensor histidine kinase, at 5,022,376 to 5,024,061
_23620
IAI46_23625: IAI46_23625 - peptidylprolyl isomerase A, at 5,024,222 to 5,024,791
_23625
Position (kb) 5022
5023
5024
5025 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5021.380 kb on + strand at 5021.380 kb on + strand at 5021.411 kb on + strand, within IAI46_23610 at 5021.421 kb on + strand, within IAI46_23610 at 5021.422 kb on - strand, within IAI46_23610 at 5021.428 kb on - strand, within IAI46_23610 at 5021.449 kb on + strand, within IAI46_23610 at 5021.498 kb on - strand, within IAI46_23610 at 5021.571 kb on + strand, within IAI46_23610 at 5021.572 kb on - strand, within IAI46_23610 at 5021.602 kb on + strand, within IAI46_23610 at 5021.603 kb on - strand, within IAI46_23610 at 5021.619 kb on + strand, within IAI46_23610 at 5021.648 kb on + strand at 5021.648 kb on + strand at 5021.793 kb on + strand, within IAI46_23615 at 5021.794 kb on - strand, within IAI46_23615 at 5021.811 kb on - strand, within IAI46_23615 at 5021.811 kb on - strand, within IAI46_23615 at 5021.854 kb on + strand, within IAI46_23615 at 5021.875 kb on + strand, within IAI46_23615 at 5021.875 kb on + strand, within IAI46_23615 at 5021.888 kb on + strand, within IAI46_23615 at 5021.889 kb on - strand, within IAI46_23615 at 5021.910 kb on - strand, within IAI46_23615 at 5021.910 kb on - strand, within IAI46_23615 at 5021.915 kb on + strand, within IAI46_23615 at 5021.916 kb on - strand, within IAI46_23615 at 5021.916 kb on - strand, within IAI46_23615 at 5021.916 kb on - strand, within IAI46_23615 at 5021.919 kb on - strand, within IAI46_23615 at 5021.919 kb on - strand, within IAI46_23615 at 5021.940 kb on + strand, within IAI46_23615 at 5021.940 kb on + strand, within IAI46_23615 at 5021.941 kb on - strand, within IAI46_23615 at 5021.941 kb on - strand, within IAI46_23615 at 5021.970 kb on + strand, within IAI46_23615 at 5021.970 kb on + strand, within IAI46_23615 at 5021.970 kb on + strand, within IAI46_23615 at 5021.971 kb on - strand, within IAI46_23615 at 5021.971 kb on - strand, within IAI46_23615 at 5021.971 kb on - strand, within IAI46_23615 at 5021.971 kb on - strand, within IAI46_23615 at 5022.085 kb on - strand, within IAI46_23615 at 5022.121 kb on - strand, within IAI46_23615 at 5022.129 kb on + strand, within IAI46_23615 at 5022.179 kb on + strand, within IAI46_23615 at 5022.179 kb on + strand, within IAI46_23615 at 5022.179 kb on + strand, within IAI46_23615 at 5022.179 kb on + strand, within IAI46_23615 at 5022.180 kb on - strand, within IAI46_23615 at 5022.180 kb on - strand, within IAI46_23615 at 5022.180 kb on - strand, within IAI46_23615 at 5022.267 kb on - strand, within IAI46_23615 at 5022.267 kb on - strand, within IAI46_23615 at 5022.267 kb on - strand, within IAI46_23615 at 5022.267 kb on - strand, within IAI46_23615 at 5022.371 kb on + strand at 5022.398 kb on - strand at 5022.398 kb on - strand at 5022.398 kb on - strand at 5022.408 kb on + strand at 5022.408 kb on + strand at 5022.409 kb on - strand at 5022.445 kb on + strand at 5022.470 kb on - strand at 5022.477 kb on + strand at 5022.478 kb on - strand at 5022.478 kb on - strand at 5022.478 kb on - strand at 5022.487 kb on + strand at 5022.488 kb on - strand at 5022.488 kb on - strand at 5022.488 kb on - strand at 5022.488 kb on - strand at 5022.531 kb on - strand at 5022.531 kb on - strand at 5022.559 kb on + strand, within IAI46_23620 at 5022.560 kb on - strand, within IAI46_23620 at 5022.591 kb on + strand, within IAI46_23620 at 5022.591 kb on + strand, within IAI46_23620 at 5022.591 kb on + strand, within IAI46_23620 at 5022.591 kb on + strand, within IAI46_23620 at 5022.592 kb on - strand, within IAI46_23620 at 5022.595 kb on + strand, within IAI46_23620 at 5022.595 kb on + strand, within IAI46_23620 at 5022.595 kb on + strand, within IAI46_23620 at 5022.596 kb on - strand, within IAI46_23620 at 5022.596 kb on - strand, within IAI46_23620 at 5022.596 kb on - strand, within IAI46_23620 at 5022.596 kb on - strand, within IAI46_23620 at 5022.596 kb on - strand, within IAI46_23620 at 5022.596 kb on - strand, within IAI46_23620 at 5022.596 kb on - strand, within IAI46_23620 at 5022.596 kb on - strand, within IAI46_23620 at 5022.680 kb on - strand, within IAI46_23620 at 5022.680 kb on - strand, within IAI46_23620 at 5022.755 kb on + strand, within IAI46_23620 at 5022.755 kb on + strand, within IAI46_23620 at 5022.839 kb on + strand, within IAI46_23620 at 5022.840 kb on - strand, within IAI46_23620 at 5022.840 kb on - strand, within IAI46_23620 at 5022.894 kb on + strand, within IAI46_23620 at 5022.895 kb on - strand, within IAI46_23620 at 5022.895 kb on - strand, within IAI46_23620 at 5022.895 kb on - strand, within IAI46_23620 at 5022.983 kb on + strand, within IAI46_23620 at 5022.984 kb on - strand, within IAI46_23620 at 5023.023 kb on + strand, within IAI46_23620 at 5023.050 kb on + strand, within IAI46_23620 at 5023.051 kb on - strand, within IAI46_23620 at 5023.051 kb on - strand, within IAI46_23620 at 5023.076 kb on + strand, within IAI46_23620 at 5023.077 kb on - strand, within IAI46_23620 at 5023.408 kb on - strand, within IAI46_23620 at 5023.408 kb on - strand, within IAI46_23620 at 5023.451 kb on + strand, within IAI46_23620 at 5023.491 kb on + strand, within IAI46_23620 at 5023.492 kb on - strand, within IAI46_23620 at 5023.492 kb on - strand, within IAI46_23620 at 5023.590 kb on + strand, within IAI46_23620 at 5023.722 kb on + strand, within IAI46_23620 at 5023.750 kb on - strand, within IAI46_23620 at 5023.886 kb on + strand, within IAI46_23620 at 5023.886 kb on + strand, within IAI46_23620 at 5023.887 kb on - strand, within IAI46_23620 at 5023.922 kb on + strand at 5023.923 kb on - strand at 5023.930 kb on + strand at 5023.930 kb on + strand at 5023.986 kb on + strand at 5023.987 kb on - strand at 5023.994 kb on - strand at 5023.997 kb on + strand at 5023.998 kb on - strand at 5023.998 kb on - strand at 5023.998 kb on - strand at 5024.012 kb on + strand at 5024.013 kb on - strand at 5024.030 kb on - strand at 5024.030 kb on - strand at 5024.118 kb on + strand at 5024.119 kb on - strand at 5024.119 kb on - strand at 5024.119 kb on - strand at 5024.120 kb on + strand at 5024.121 kb on - strand at 5024.254 kb on + strand at 5024.255 kb on - strand at 5024.255 kb on - strand at 5024.255 kb on - strand at 5024.255 kb on - strand at 5024.260 kb on + strand at 5024.261 kb on - strand at 5024.261 kb on - strand at 5024.318 kb on + strand, within IAI46_23625 at 5024.318 kb on + strand, within IAI46_23625 at 5024.318 kb on + strand, within IAI46_23625 at 5024.318 kb on + strand, within IAI46_23625 at 5024.318 kb on + strand, within IAI46_23625 at 5024.425 kb on + strand, within IAI46_23625 at 5024.426 kb on - strand, within IAI46_23625 at 5024.426 kb on - strand, within IAI46_23625 at 5024.426 kb on - strand, within IAI46_23625 at 5024.426 kb on - strand, within IAI46_23625 at 5024.437 kb on + strand, within IAI46_23625 at 5024.462 kb on - strand, within IAI46_23625 at 5024.542 kb on + strand, within IAI46_23625 at 5024.563 kb on + strand, within IAI46_23625 at 5024.563 kb on + strand, within IAI46_23625 at 5024.590 kb on + strand, within IAI46_23625 at 5024.590 kb on + strand, within IAI46_23625 at 5024.591 kb on - strand, within IAI46_23625 at 5024.591 kb on - strand, within IAI46_23625 at 5024.591 kb on - strand, within IAI46_23625 at 5024.591 kb on - strand, within IAI46_23625 at 5024.601 kb on + strand, within IAI46_23625 at 5024.601 kb on + strand, within IAI46_23625 at 5024.605 kb on - strand, within IAI46_23625 at 5024.619 kb on + strand, within IAI46_23625 at 5024.619 kb on + strand, within IAI46_23625 at 5024.620 kb on - strand, within IAI46_23625 at 5024.620 kb on - strand, within IAI46_23625 at 5024.775 kb on - strand at 5024.775 kb on - strand at 5024.775 kb on - strand at 5024.779 kb on + strand at 5024.808 kb on + strand at 5024.842 kb on - strand at 5024.842 kb on - strand at 5024.872 kb on + strand at 5024.899 kb on + strand at 5024.899 kb on + strand at 5024.899 kb on + strand at 5024.900 kb on - strand at 5024.900 kb on - strand at 5024.921 kb on + strand at 5024.933 kb on + strand at 5024.945 kb on - strand at 5024.945 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 5,021,380 + +0.2 5,021,380 + -0.8 5,021,411 + IAI46_23610 0.14 -0.6 5,021,421 + IAI46_23610 0.17 -0.9 5,021,422 - IAI46_23610 0.18 +1.1 5,021,428 - IAI46_23610 0.20 -0.2 5,021,449 + IAI46_23610 0.27 +0.3 5,021,498 - IAI46_23610 0.45 +0.8 5,021,571 + IAI46_23610 0.71 -0.4 5,021,572 - IAI46_23610 0.72 -0.4 5,021,602 + IAI46_23610 0.82 -0.3 5,021,603 - IAI46_23610 0.83 -0.2 5,021,619 + IAI46_23610 0.88 -0.1 5,021,648 + +0.0 5,021,648 + -0.3 5,021,793 + IAI46_23615 0.20 +0.4 5,021,794 - IAI46_23615 0.20 -0.3 5,021,811 - IAI46_23615 0.22 -0.4 5,021,811 - IAI46_23615 0.22 +0.2 5,021,854 + IAI46_23615 0.28 -1.0 5,021,875 + IAI46_23615 0.31 +0.4 5,021,875 + IAI46_23615 0.31 -0.2 5,021,888 + IAI46_23615 0.33 +0.4 5,021,889 - IAI46_23615 0.33 +0.4 5,021,910 - IAI46_23615 0.36 +1.3 5,021,910 - IAI46_23615 0.36 +0.7 5,021,915 + IAI46_23615 0.36 +0.1 5,021,916 - IAI46_23615 0.37 +0.4 5,021,916 - IAI46_23615 0.37 -0.4 5,021,916 - IAI46_23615 0.37 -0.0 5,021,919 - IAI46_23615 0.37 -2.2 5,021,919 - IAI46_23615 0.37 +0.8 5,021,940 + IAI46_23615 0.40 -0.0 5,021,940 + IAI46_23615 0.40 +1.3 5,021,941 - IAI46_23615 0.40 -0.0 5,021,941 - IAI46_23615 0.40 +0.7 5,021,970 + IAI46_23615 0.44 -0.3 5,021,970 + IAI46_23615 0.44 +0.6 5,021,970 + IAI46_23615 0.44 -0.3 5,021,971 - IAI46_23615 0.44 +0.8 5,021,971 - IAI46_23615 0.44 -1.3 5,021,971 - IAI46_23615 0.44 -0.0 5,021,971 - IAI46_23615 0.44 -0.0 5,022,085 - IAI46_23615 0.60 -0.2 5,022,121 - IAI46_23615 0.65 +0.0 5,022,129 + IAI46_23615 0.66 -0.2 5,022,179 + IAI46_23615 0.73 -0.0 5,022,179 + IAI46_23615 0.73 +0.4 5,022,179 + IAI46_23615 0.73 +0.3 5,022,179 + IAI46_23615 0.73 +0.0 5,022,180 - IAI46_23615 0.73 +1.4 5,022,180 - IAI46_23615 0.73 +0.5 5,022,180 - IAI46_23615 0.73 -0.0 5,022,267 - IAI46_23615 0.85 -1.2 5,022,267 - IAI46_23615 0.85 +0.2 5,022,267 - IAI46_23615 0.85 +0.4 5,022,267 - IAI46_23615 0.85 +0.8 5,022,371 + -0.0 5,022,398 - -0.2 5,022,398 - +0.5 5,022,398 - +0.2 5,022,408 + +0.8 5,022,408 + +0.0 5,022,409 - +0.2 5,022,445 + +0.4 5,022,470 - +0.2 5,022,477 + +0.0 5,022,478 - +0.1 5,022,478 - +0.5 5,022,478 - +0.8 5,022,487 + -0.1 5,022,488 - +0.2 5,022,488 - +0.7 5,022,488 - +0.1 5,022,488 - -0.6 5,022,531 - -0.1 5,022,531 - +0.2 5,022,559 + IAI46_23620 0.11 -0.1 5,022,560 - IAI46_23620 0.11 -0.1 5,022,591 + IAI46_23620 0.13 -0.1 5,022,591 + IAI46_23620 0.13 +1.0 5,022,591 + IAI46_23620 0.13 +0.2 5,022,591 + IAI46_23620 0.13 -0.4 5,022,592 - IAI46_23620 0.13 +0.6 5,022,595 + IAI46_23620 0.13 +0.5 5,022,595 + IAI46_23620 0.13 -0.2 5,022,595 + IAI46_23620 0.13 +0.0 5,022,596 - IAI46_23620 0.13 +0.4 5,022,596 - IAI46_23620 0.13 +0.4 5,022,596 - IAI46_23620 0.13 -0.6 5,022,596 - IAI46_23620 0.13 +0.8 5,022,596 - IAI46_23620 0.13 +0.2 5,022,596 - IAI46_23620 0.13 -0.2 5,022,596 - IAI46_23620 0.13 -0.1 5,022,596 - IAI46_23620 0.13 -1.3 5,022,680 - IAI46_23620 0.18 +0.5 5,022,680 - IAI46_23620 0.18 +0.7 5,022,755 + IAI46_23620 0.22 +0.7 5,022,755 + IAI46_23620 0.22 +0.2 5,022,839 + IAI46_23620 0.27 +0.6 5,022,840 - IAI46_23620 0.28 -0.3 5,022,840 - IAI46_23620 0.28 -0.8 5,022,894 + IAI46_23620 0.31 +1.1 5,022,895 - IAI46_23620 0.31 +0.3 5,022,895 - IAI46_23620 0.31 -0.5 5,022,895 - IAI46_23620 0.31 -0.1 5,022,983 + IAI46_23620 0.36 +0.9 5,022,984 - IAI46_23620 0.36 -0.1 5,023,023 + IAI46_23620 0.38 +0.4 5,023,050 + IAI46_23620 0.40 -0.3 5,023,051 - IAI46_23620 0.40 -0.1 5,023,051 - IAI46_23620 0.40 -1.4 5,023,076 + IAI46_23620 0.42 -0.6 5,023,077 - IAI46_23620 0.42 +0.2 5,023,408 - IAI46_23620 0.61 +0.4 5,023,408 - IAI46_23620 0.61 +0.3 5,023,451 + IAI46_23620 0.64 -0.1 5,023,491 + IAI46_23620 0.66 +0.3 5,023,492 - IAI46_23620 0.66 +0.3 5,023,492 - IAI46_23620 0.66 -0.2 5,023,590 + IAI46_23620 0.72 +1.0 5,023,722 + IAI46_23620 0.80 +0.3 5,023,750 - IAI46_23620 0.81 -0.3 5,023,886 + IAI46_23620 0.90 -0.3 5,023,886 + IAI46_23620 0.90 -1.3 5,023,887 - IAI46_23620 0.90 +0.3 5,023,922 + +0.2 5,023,923 - +0.2 5,023,930 + +0.3 5,023,930 + +1.1 5,023,986 + -0.7 5,023,987 - -1.3 5,023,994 - -0.0 5,023,997 + -0.1 5,023,998 - -0.1 5,023,998 - +0.8 5,023,998 - -0.7 5,024,012 + -0.6 5,024,013 - -1.6 5,024,030 - +1.0 5,024,030 - -0.2 5,024,118 + -1.6 5,024,119 - +0.3 5,024,119 - -0.4 5,024,119 - +0.8 5,024,120 + +0.3 5,024,121 - -0.9 5,024,254 + -0.1 5,024,255 - -0.1 5,024,255 - +0.6 5,024,255 - -0.5 5,024,255 - +0.1 5,024,260 + +0.2 5,024,261 - +0.2 5,024,261 - +1.8 5,024,318 + IAI46_23625 0.17 +0.4 5,024,318 + IAI46_23625 0.17 -0.2 5,024,318 + IAI46_23625 0.17 +0.4 5,024,318 + IAI46_23625 0.17 -0.2 5,024,318 + IAI46_23625 0.17 +0.0 5,024,425 + IAI46_23625 0.36 -0.1 5,024,426 - IAI46_23625 0.36 +0.3 5,024,426 - IAI46_23625 0.36 +1.0 5,024,426 - IAI46_23625 0.36 +0.4 5,024,426 - IAI46_23625 0.36 -0.5 5,024,437 + IAI46_23625 0.38 +0.6 5,024,462 - IAI46_23625 0.42 +0.5 5,024,542 + IAI46_23625 0.56 -0.1 5,024,563 + IAI46_23625 0.60 +0.2 5,024,563 + IAI46_23625 0.60 -1.3 5,024,590 + IAI46_23625 0.65 -0.7 5,024,590 + IAI46_23625 0.65 +0.1 5,024,591 - IAI46_23625 0.65 +0.4 5,024,591 - IAI46_23625 0.65 +0.4 5,024,591 - IAI46_23625 0.65 +0.1 5,024,591 - IAI46_23625 0.65 +0.5 5,024,601 + IAI46_23625 0.66 +0.3 5,024,601 + IAI46_23625 0.66 +0.4 5,024,605 - IAI46_23625 0.67 -1.0 5,024,619 + IAI46_23625 0.70 +0.2 5,024,619 + IAI46_23625 0.70 +0.8 5,024,620 - IAI46_23625 0.70 -0.2 5,024,620 - IAI46_23625 0.70 -0.3 5,024,775 - -0.4 5,024,775 - +0.1 5,024,775 - -0.2 5,024,779 + +0.6 5,024,808 + -0.2 5,024,842 - +0.0 5,024,842 - -0.2 5,024,872 + -0.5 5,024,899 + +0.4 5,024,899 + -0.9 5,024,899 + -0.8 5,024,900 - +0.2 5,024,900 - +0.3 5,024,921 + +0.3 5,024,933 + -0.3 5,024,945 - +0.4 5,024,945 - -0.4
Or see this region's nucleotide sequence