Strain Fitness in Serratia liquefaciens MT49 around IAI46_22510

Experiment: Cobalt chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cobalt chloride 80 uM, aerobic
4,789,115	-		IAI46_22505	0.51	-0.8
4,789,131	+		IAI46_22505	0.51	+0.4
4,789,131	+		IAI46_22505	0.51	-0.2
4,789,132	-		IAI46_22505	0.51	+0.3
4,789,136	-		IAI46_22505	0.52	+1.3
4,789,136	-		IAI46_22505	0.52	+0.8
4,789,138	-		IAI46_22505	0.52	+1.1
4,789,138	-		IAI46_22505	0.52	+0.3
4,789,150	+		IAI46_22505	0.52	-0.8
4,789,150	+		IAI46_22505	0.52	+0.4
4,789,151	-		IAI46_22505	0.52	-0.3
4,789,151	-		IAI46_22505	0.52	+0.0
4,789,152	+		IAI46_22505	0.52	+0.2
4,789,152	+		IAI46_22505	0.52	+0.8
4,789,152	+		IAI46_22505	0.52	-0.2
4,789,164	+		IAI46_22505	0.53	+0.1
4,789,164	+		IAI46_22505	0.53	-0.5
4,789,165	-		IAI46_22505	0.53	-1.0
4,789,165	-		IAI46_22505	0.53	-0.2
4,789,165	-		IAI46_22505	0.53	-1.6
4,789,248	-		IAI46_22505	0.57	-0.4
4,789,248	-		IAI46_22505	0.57	-0.3
4,789,251	+		IAI46_22505	0.58	-0.2
4,789,251	+		IAI46_22505	0.58	-0.4
4,789,251	+		IAI46_22505	0.58	-0.5
4,789,251	+		IAI46_22505	0.58	+0.5
4,789,252	-		IAI46_22505	0.58	-0.7
4,789,295	+		IAI46_22505	0.60	-0.2
4,789,295	+		IAI46_22505	0.60	-0.2
4,789,316	-		IAI46_22505	0.61	-1.7
4,789,316	-		IAI46_22505	0.61	+1.5
4,789,325	-		IAI46_22505	0.62	-0.0
4,789,325	-		IAI46_22505	0.62	-0.9
4,789,325	-		IAI46_22505	0.62	-0.1
4,789,407	+		IAI46_22505	0.66	-0.8
4,789,419	+		IAI46_22505	0.66	-0.3
4,789,420	-		IAI46_22505	0.66	+0.6
4,789,447	+		IAI46_22505	0.68	-1.3
4,789,447	+		IAI46_22505	0.68	+0.0
4,789,448	-		IAI46_22505	0.68	+0.4
4,789,448	-		IAI46_22505	0.68	+0.7
4,789,522	+		IAI46_22505	0.72	-0.1
4,789,562	+		IAI46_22505	0.74	+0.9
4,789,620	+		IAI46_22505	0.77	+1.0
4,789,776	+		IAI46_22505	0.85	+0.6
4,789,776	+		IAI46_22505	0.85	+0.5
4,789,777	-		IAI46_22505	0.85	-1.9
4,789,777	-		IAI46_22505	0.85	+0.3
4,789,782	-		IAI46_22505	0.85	-0.1
4,789,912	-				-0.1
4,790,031	+				+0.5
4,790,078	+				+0.5
4,790,079	-				+0.7
4,790,079	-				+0.4
4,790,115	+				-0.8
4,790,116	-				-0.5
4,790,116	-				+0.2
4,790,116	-				-0.7
4,790,164	+				-1.1
4,790,164	+				-0.4
4,790,165	-				-0.6
4,790,165	-				-0.1
4,790,167	-				+0.7
4,790,200	+				+1.1
4,790,247	+		IAI46_22510	0.11	-0.6
4,790,248	-		IAI46_22510	0.11	+0.2
4,790,248	-		IAI46_22510	0.11	+0.3
4,790,253	+		IAI46_22510	0.11	+0.3
4,790,365	+		IAI46_22510	0.21	-0.2
4,790,365	+		IAI46_22510	0.21	-0.8
4,790,365	+		IAI46_22510	0.21	+0.6
4,790,366	-		IAI46_22510	0.21	+0.5
4,790,366	-		IAI46_22510	0.21	-1.4
4,790,366	-		IAI46_22510	0.21	-0.1
4,790,386	-		IAI46_22510	0.22	+0.3
4,790,386	-		IAI46_22510	0.22	+0.9
4,790,440	+		IAI46_22510	0.27	-0.4
4,790,441	-		IAI46_22510	0.27	+0.1
4,790,441	-		IAI46_22510	0.27	+0.6
4,790,441	-		IAI46_22510	0.27	-1.5
4,790,441	-		IAI46_22510	0.27	+0.4
4,790,441	-		IAI46_22510	0.27	+0.4
4,790,443	-		IAI46_22510	0.27	-0.1
4,790,443	-		IAI46_22510	0.27	+0.2
4,790,486	-		IAI46_22510	0.31	-0.0
4,790,509	-		IAI46_22510	0.32	-0.1
4,790,633	+		IAI46_22510	0.43	+1.7
4,790,667	+		IAI46_22510	0.45	+0.1
4,790,668	-		IAI46_22510	0.45	+0.5
4,790,671	+		IAI46_22510	0.46	-2.4
4,790,731	+		IAI46_22510	0.51	+0.9
4,790,731	+		IAI46_22510	0.51	-1.2
4,790,732	-		IAI46_22510	0.51	-1.7
4,790,732	-		IAI46_22510	0.51	-0.2
4,790,732	-		IAI46_22510	0.51	+1.6
4,790,761	+		IAI46_22510	0.53	+0.0
4,790,761	+		IAI46_22510	0.53	+0.5
4,790,762	-		IAI46_22510	0.53	+0.0
4,790,892	+		IAI46_22510	0.64	+0.4
4,790,893	-		IAI46_22510	0.64	-0.6
4,790,893	-		IAI46_22510	0.64	+0.4
4,790,893	-		IAI46_22510	0.64	+0.4
4,790,893	-		IAI46_22510	0.64	+0.1
4,790,938	-		IAI46_22510	0.68	-0.3
4,790,938	-		IAI46_22510	0.68	+0.7
4,791,005	-		IAI46_22510	0.73	+0.3
4,791,009	+		IAI46_22510	0.73	-0.4
4,791,016	+		IAI46_22510	0.74	-1.9
4,791,016	+		IAI46_22510	0.74	-0.3
4,791,066	+		IAI46_22510	0.78	-0.9
4,791,066	+		IAI46_22510	0.78	-0.0
4,791,067	-		IAI46_22510	0.78	-0.5
4,791,094	+		IAI46_22510	0.80	-0.0
4,791,095	-		IAI46_22510	0.81	-0.3
4,791,175	-		IAI46_22510	0.87	-0.7
4,791,198	+		IAI46_22510	0.89	+0.5
4,791,198	+		IAI46_22510	0.89	+0.2
4,791,198	+		IAI46_22510	0.89	+0.1
4,791,198	+		IAI46_22510	0.89	+0.3
4,791,198	+		IAI46_22510	0.89	-0.7
4,791,198	+		IAI46_22510	0.89	+0.7
4,791,198	+		IAI46_22510	0.89	-0.5
4,791,198	+		IAI46_22510	0.89	+0.2
4,791,199	-		IAI46_22510	0.89	+0.3
4,791,199	-		IAI46_22510	0.89	+0.1
4,791,199	-		IAI46_22510	0.89	+0.2
4,791,199	-		IAI46_22510	0.89	+0.8
4,791,202	+		IAI46_22510	0.89	-0.1
4,791,209	-		IAI46_22510	0.90	+1.3
4,791,211	-				+0.7
4,791,211	-				-0.2
4,791,229	+				+1.0
4,791,229	+				-0.4
4,791,230	-				+0.1
4,791,331	+				-1.1
4,791,331	+				-0.1
4,791,332	-				-0.7
4,791,332	-				-0.6
4,791,332	-				+1.1
4,791,332	-				+0.9
4,791,336	-				-0.6
4,791,336	-				-1.1
4,791,336	-				+0.5
4,791,346	+				-0.3
4,791,346	+				+1.5
4,791,346	+				+0.5
4,791,346	+				-0.7
4,791,347	-				-0.5
4,791,347	-				+0.1
4,791,347	-				+0.2
4,791,347	-				+0.1
4,791,347	-				-0.4
4,791,347	-				-0.4
4,791,347	-				+0.5
4,791,347	-				-0.9
4,791,347	-				+0.3
4,791,347	-				-0.4
4,791,349	-				-0.0
4,791,374	+				+0.8
4,791,374	+				-0.1
4,791,375	-				+0.9
4,791,375	-				-0.5
4,791,375	-				-0.5
4,791,375	-				+0.3
4,791,375	-				+0.6
4,791,375	-				-0.2
4,791,378	+				+1.1
4,791,379	-				-1.4
4,791,379	-				-1.0
4,791,438	+				-0.1
4,791,462	+				+0.9
4,791,462	+				+0.7
4,791,463	-				+0.7
4,791,463	-				-0.5
4,791,463	-				-0.1
4,791,463	-				-0.4
4,791,569	+		IAI46_22515	0.12	+0.1
4,791,569	+		IAI46_22515	0.12	+0.5
4,791,570	-		IAI46_22515	0.12	-1.7
4,791,570	-		IAI46_22515	0.12	-0.1
4,791,571	+		IAI46_22515	0.12	+0.8
4,791,571	+		IAI46_22515	0.12	-1.6
4,791,571	+		IAI46_22515	0.12	+0.9
4,791,571	+		IAI46_22515	0.12	+0.4
4,791,571	+		IAI46_22515	0.12	-0.5
4,791,571	+		IAI46_22515	0.12	+0.3
4,791,571	+		IAI46_22515	0.12	-0.5
4,791,571	+		IAI46_22515	0.12	-0.6
4,791,572	-		IAI46_22515	0.12	+0.7
4,791,572	-		IAI46_22515	0.12	+0.8
4,791,572	-		IAI46_22515	0.12	+0.0
4,791,572	-		IAI46_22515	0.12	+0.1
4,791,572	-		IAI46_22515	0.12	-0.5
4,791,572	-		IAI46_22515	0.12	+0.1
4,791,572	-		IAI46_22515	0.12	+0.8
4,791,572	-		IAI46_22515	0.12	+0.1
4,791,572	-		IAI46_22515	0.12	-0.7
4,791,572	-		IAI46_22515	0.12	-0.1
4,791,572	-		IAI46_22515	0.12	-0.1
4,791,668	+		IAI46_22515	0.25	-0.3
4,791,668	+		IAI46_22515	0.25	+0.2
4,791,668	+		IAI46_22515	0.25	-0.2
4,791,669	-		IAI46_22515	0.25	-1.8
4,791,700	+		IAI46_22515	0.29	+0.3
4,791,701	-		IAI46_22515	0.29	+0.8
4,791,706	+		IAI46_22515	0.30	+0.3
4,791,706	+		IAI46_22515	0.30	+0.4
4,791,707	-		IAI46_22515	0.30	+0.2
4,791,743	-		IAI46_22515	0.35	+0.7
4,791,755	+		IAI46_22515	0.37	-0.6
4,791,756	-		IAI46_22515	0.37	-0.8
4,791,964	-		IAI46_22515	0.65	-0.4
4,792,002	-		IAI46_22515	0.70	+0.0
4,792,054	+		IAI46_22515	0.77	-0.4
4,792,141	+		IAI46_22515	0.89	-0.8
4,792,142	-		IAI46_22515	0.89	+1.3
4,792,142	-		IAI46_22515	0.89	-0.5
4,792,142	-		IAI46_22515	0.89	+0.8
4,792,142	-		IAI46_22515	0.89	-0.4
4,792,202	-				+0.3
4,792,205	-				-0.1
4,792,205	-				+0.5
4,792,205	-				+0.4
4,792,208	+				+0.4
4,792,208	+				+1.2
4,792,209	-				+0.1
4,792,209	-				+2.1
4,792,209	-				+0.4
4,792,209	-				+0.3
4,792,209	-				+0.0
4,792,249	+				-0.2
4,792,250	-				+0.8
4,792,253	-				+0.2
4,792,253	-				+0.0
4,792,321	+				-0.5
4,792,329	+				-1.4
4,792,329	+				+0.6