Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_21695 and IAI46_21700 are separated by 36 nucleotides IAI46_21700 and IAI46_21705 are separated by 50 nucleotides IAI46_21705 and IAI46_21710 overlap by 1 nucleotides IAI46_21710 and IAI46_21715 are separated by 138 nucleotides
IAI46_21695: IAI46_21695 - LacI family DNA-binding transcriptional regulator, at 4,614,223 to 4,615,266
_21695
IAI46_21700: IAI46_21700 - shikimate 5-dehydrogenase, at 4,615,303 to 4,616,121
_21700
IAI46_21705: IAI46_21705 - type II toxin-antitoxin system RelE/ParE family toxin, at 4,616,172 to 4,616,465
_21705
IAI46_21710: IAI46_21710 - type II toxin-antitoxin system ParD family antitoxin, at 4,616,465 to 4,616,725
_21710
IAI46_21715: IAI46_21715 - TonB system transport protein ExbD, at 4,616,864 to 4,617,286
_21715
Position (kb) 4615
4616
4617 Strain fitness (log2 ratio) -1
0
1 at 4614.312 kb on + strand at 4614.313 kb on - strand at 4614.331 kb on + strand, within IAI46_21695 at 4614.389 kb on - strand, within IAI46_21695 at 4614.435 kb on + strand, within IAI46_21695 at 4614.436 kb on - strand, within IAI46_21695 at 4614.436 kb on - strand, within IAI46_21695 at 4614.469 kb on + strand, within IAI46_21695 at 4614.544 kb on - strand, within IAI46_21695 at 4614.747 kb on + strand, within IAI46_21695 at 4614.790 kb on + strand, within IAI46_21695 at 4614.790 kb on + strand, within IAI46_21695 at 4614.791 kb on - strand, within IAI46_21695 at 4614.908 kb on - strand, within IAI46_21695 at 4614.908 kb on - strand, within IAI46_21695 at 4614.925 kb on + strand, within IAI46_21695 at 4614.977 kb on + strand, within IAI46_21695 at 4614.982 kb on - strand, within IAI46_21695 at 4614.982 kb on - strand, within IAI46_21695 at 4614.982 kb on - strand, within IAI46_21695 at 4615.018 kb on + strand, within IAI46_21695 at 4615.078 kb on + strand, within IAI46_21695 at 4615.078 kb on + strand, within IAI46_21695 at 4615.317 kb on + strand at 4615.383 kb on + strand at 4615.383 kb on + strand at 4615.383 kb on + strand at 4615.384 kb on - strand at 4615.384 kb on - strand at 4615.387 kb on + strand, within IAI46_21700 at 4615.387 kb on + strand, within IAI46_21700 at 4615.387 kb on + strand, within IAI46_21700 at 4615.387 kb on + strand, within IAI46_21700 at 4615.388 kb on - strand, within IAI46_21700 at 4615.388 kb on - strand, within IAI46_21700 at 4615.388 kb on - strand, within IAI46_21700 at 4615.388 kb on - strand, within IAI46_21700 at 4615.388 kb on - strand, within IAI46_21700 at 4615.394 kb on - strand, within IAI46_21700 at 4615.417 kb on - strand, within IAI46_21700 at 4615.420 kb on + strand, within IAI46_21700 at 4615.609 kb on + strand, within IAI46_21700 at 4615.609 kb on + strand, within IAI46_21700 at 4615.610 kb on - strand, within IAI46_21700 at 4615.611 kb on + strand, within IAI46_21700 at 4615.612 kb on - strand, within IAI46_21700 at 4615.612 kb on - strand, within IAI46_21700 at 4615.621 kb on + strand, within IAI46_21700 at 4615.621 kb on + strand, within IAI46_21700 at 4615.622 kb on - strand, within IAI46_21700 at 4615.622 kb on - strand, within IAI46_21700 at 4615.698 kb on + strand, within IAI46_21700 at 4615.698 kb on + strand, within IAI46_21700 at 4615.752 kb on + strand, within IAI46_21700 at 4615.799 kb on - strand, within IAI46_21700 at 4615.799 kb on - strand, within IAI46_21700 at 4615.833 kb on - strand, within IAI46_21700 at 4615.856 kb on + strand, within IAI46_21700 at 4615.857 kb on - strand, within IAI46_21700 at 4616.060 kb on - strand at 4616.069 kb on + strand at 4616.070 kb on - strand at 4616.076 kb on + strand at 4616.199 kb on - strand at 4616.218 kb on - strand, within IAI46_21705 at 4616.237 kb on + strand, within IAI46_21705 at 4616.237 kb on + strand, within IAI46_21705 at 4616.238 kb on - strand, within IAI46_21705 at 4616.244 kb on + strand, within IAI46_21705 at 4616.244 kb on + strand, within IAI46_21705 at 4616.245 kb on - strand, within IAI46_21705 at 4616.262 kb on + strand, within IAI46_21705 at 4616.266 kb on + strand, within IAI46_21705 at 4616.266 kb on + strand, within IAI46_21705 at 4616.267 kb on - strand, within IAI46_21705 at 4616.267 kb on - strand, within IAI46_21705 at 4616.320 kb on + strand, within IAI46_21705 at 4616.357 kb on + strand, within IAI46_21705 at 4616.357 kb on + strand, within IAI46_21705 at 4616.357 kb on + strand, within IAI46_21705 at 4616.359 kb on + strand, within IAI46_21705 at 4616.359 kb on + strand, within IAI46_21705 at 4616.359 kb on + strand, within IAI46_21705 at 4616.359 kb on + strand, within IAI46_21705 at 4616.359 kb on + strand, within IAI46_21705 at 4616.360 kb on - strand, within IAI46_21705 at 4616.373 kb on - strand, within IAI46_21705 at 4616.408 kb on + strand, within IAI46_21705 at 4616.409 kb on - strand, within IAI46_21705 at 4616.435 kb on - strand, within IAI46_21705 at 4616.435 kb on - strand, within IAI46_21705 at 4616.496 kb on + strand, within IAI46_21710 at 4616.496 kb on + strand, within IAI46_21710 at 4616.561 kb on + strand, within IAI46_21710 at 4616.633 kb on + strand, within IAI46_21710 at 4616.705 kb on + strand at 4616.716 kb on + strand at 4616.752 kb on + strand at 4616.760 kb on - strand at 4616.762 kb on + strand at 4616.800 kb on - strand at 4616.816 kb on - strand at 4616.917 kb on + strand, within IAI46_21715 at 4616.927 kb on - strand, within IAI46_21715 at 4616.933 kb on + strand, within IAI46_21715 at 4616.933 kb on + strand, within IAI46_21715 at 4617.063 kb on + strand, within IAI46_21715 at 4617.063 kb on + strand, within IAI46_21715 at 4617.063 kb on + strand, within IAI46_21715 at 4617.063 kb on + strand, within IAI46_21715 at 4617.064 kb on - strand, within IAI46_21715
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 4,614,312 + +0.1 4,614,313 - +0.7 4,614,331 + IAI46_21695 0.10 +0.8 4,614,389 - IAI46_21695 0.16 +0.6 4,614,435 + IAI46_21695 0.20 +0.7 4,614,436 - IAI46_21695 0.20 -0.4 4,614,436 - IAI46_21695 0.20 +0.5 4,614,469 + IAI46_21695 0.24 +0.8 4,614,544 - IAI46_21695 0.31 -0.0 4,614,747 + IAI46_21695 0.50 +0.9 4,614,790 + IAI46_21695 0.54 -0.3 4,614,790 + IAI46_21695 0.54 +0.0 4,614,791 - IAI46_21695 0.54 -0.1 4,614,908 - IAI46_21695 0.66 -0.4 4,614,908 - IAI46_21695 0.66 +0.7 4,614,925 + IAI46_21695 0.67 +0.2 4,614,977 + IAI46_21695 0.72 -0.6 4,614,982 - IAI46_21695 0.73 -0.5 4,614,982 - IAI46_21695 0.73 +0.3 4,614,982 - IAI46_21695 0.73 +0.5 4,615,018 + IAI46_21695 0.76 -0.0 4,615,078 + IAI46_21695 0.82 -0.4 4,615,078 + IAI46_21695 0.82 -0.2 4,615,317 + -0.1 4,615,383 + -0.4 4,615,383 + -0.3 4,615,383 + -0.3 4,615,384 - -0.2 4,615,384 - -0.4 4,615,387 + IAI46_21700 0.10 +0.5 4,615,387 + IAI46_21700 0.10 +0.6 4,615,387 + IAI46_21700 0.10 -0.5 4,615,387 + IAI46_21700 0.10 +0.7 4,615,388 - IAI46_21700 0.10 +1.1 4,615,388 - IAI46_21700 0.10 -0.2 4,615,388 - IAI46_21700 0.10 -0.2 4,615,388 - IAI46_21700 0.10 +0.9 4,615,388 - IAI46_21700 0.10 +0.1 4,615,394 - IAI46_21700 0.11 +0.1 4,615,417 - IAI46_21700 0.14 +0.1 4,615,420 + IAI46_21700 0.14 +0.6 4,615,609 + IAI46_21700 0.37 +0.1 4,615,609 + IAI46_21700 0.37 -0.6 4,615,610 - IAI46_21700 0.37 +0.6 4,615,611 + IAI46_21700 0.38 +0.4 4,615,612 - IAI46_21700 0.38 -0.3 4,615,612 - IAI46_21700 0.38 -0.9 4,615,621 + IAI46_21700 0.39 +0.7 4,615,621 + IAI46_21700 0.39 +0.3 4,615,622 - IAI46_21700 0.39 +0.6 4,615,622 - IAI46_21700 0.39 -0.3 4,615,698 + IAI46_21700 0.48 -0.3 4,615,698 + IAI46_21700 0.48 +0.5 4,615,752 + IAI46_21700 0.55 +0.6 4,615,799 - IAI46_21700 0.61 -0.2 4,615,799 - IAI46_21700 0.61 +0.9 4,615,833 - IAI46_21700 0.65 -0.5 4,615,856 + IAI46_21700 0.68 +0.4 4,615,857 - IAI46_21700 0.68 -1.0 4,616,060 - +0.4 4,616,069 + -0.9 4,616,070 - -0.8 4,616,076 + -0.2 4,616,199 - -0.2 4,616,218 - IAI46_21705 0.16 -0.3 4,616,237 + IAI46_21705 0.22 +0.2 4,616,237 + IAI46_21705 0.22 +0.1 4,616,238 - IAI46_21705 0.22 +0.5 4,616,244 + IAI46_21705 0.24 -0.6 4,616,244 + IAI46_21705 0.24 -1.1 4,616,245 - IAI46_21705 0.25 +0.2 4,616,262 + IAI46_21705 0.31 -0.3 4,616,266 + IAI46_21705 0.32 +1.0 4,616,266 + IAI46_21705 0.32 -0.6 4,616,267 - IAI46_21705 0.32 -0.0 4,616,267 - IAI46_21705 0.32 +1.3 4,616,320 + IAI46_21705 0.50 -0.2 4,616,357 + IAI46_21705 0.63 +1.0 4,616,357 + IAI46_21705 0.63 +0.2 4,616,357 + IAI46_21705 0.63 +0.1 4,616,359 + IAI46_21705 0.64 +0.5 4,616,359 + IAI46_21705 0.64 +1.1 4,616,359 + IAI46_21705 0.64 -0.0 4,616,359 + IAI46_21705 0.64 -0.4 4,616,359 + IAI46_21705 0.64 -0.0 4,616,360 - IAI46_21705 0.64 +0.2 4,616,373 - IAI46_21705 0.68 +0.3 4,616,408 + IAI46_21705 0.80 -0.7 4,616,409 - IAI46_21705 0.81 +0.3 4,616,435 - IAI46_21705 0.89 -0.9 4,616,435 - IAI46_21705 0.89 -0.2 4,616,496 + IAI46_21710 0.12 +0.1 4,616,496 + IAI46_21710 0.12 +0.3 4,616,561 + IAI46_21710 0.37 -0.3 4,616,633 + IAI46_21710 0.64 -1.0 4,616,705 + -0.8 4,616,716 + -0.3 4,616,752 + +0.4 4,616,760 - +0.7 4,616,762 + +1.4 4,616,800 - -0.0 4,616,816 - +0.2 4,616,917 + IAI46_21715 0.13 -0.3 4,616,927 - IAI46_21715 0.15 +0.4 4,616,933 + IAI46_21715 0.16 +0.5 4,616,933 + IAI46_21715 0.16 +1.0 4,617,063 + IAI46_21715 0.47 -0.4 4,617,063 + IAI46_21715 0.47 +0.3 4,617,063 + IAI46_21715 0.47 -0.2 4,617,063 + IAI46_21715 0.47 -0.1 4,617,064 - IAI46_21715 0.47 -0.4
Or see this region's nucleotide sequence