Strain Fitness in Serratia liquefaciens MT49 around IAI46_20150

Experiment: Cobalt chloride 80 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cobalt chloride 80 uM, aerobic
4,247,732	+		IAI46_20145	0.59	+0.6
4,247,802	-		IAI46_20145	0.63	+0.1
4,247,828	+		IAI46_20145	0.64	+0.0
4,247,874	-		IAI46_20145	0.66	-0.2
4,247,874	-		IAI46_20145	0.66	-0.0
4,247,874	-		IAI46_20145	0.66	+0.4
4,247,911	+		IAI46_20145	0.68	-0.3
4,247,912	-		IAI46_20145	0.68	+0.3
4,247,912	-		IAI46_20145	0.68	-0.4
4,247,936	+		IAI46_20145	0.69	+0.0
4,247,958	-		IAI46_20145	0.70	+0.3
4,247,958	-		IAI46_20145	0.70	+0.6
4,247,958	-		IAI46_20145	0.70	-0.1
4,247,958	-		IAI46_20145	0.70	+0.0
4,247,958	-		IAI46_20145	0.70	-0.0
4,247,959	+		IAI46_20145	0.70	-0.9
4,247,959	+		IAI46_20145	0.70	-1.4
4,247,959	+		IAI46_20145	0.70	+0.6
4,247,959	+		IAI46_20145	0.70	+0.4
4,247,960	-		IAI46_20145	0.70	+1.1
4,247,960	-		IAI46_20145	0.70	-1.0
4,247,960	-		IAI46_20145	0.70	+0.5
4,247,990	+		IAI46_20145	0.72	-0.1
4,247,991	-		IAI46_20145	0.72	-0.3
4,247,991	-		IAI46_20145	0.72	+0.8
4,247,991	-		IAI46_20145	0.72	-1.6
4,247,991	-		IAI46_20145	0.72	-0.2
4,247,991	-		IAI46_20145	0.72	-2.5
4,247,992	+		IAI46_20145	0.72	+0.1
4,247,992	+		IAI46_20145	0.72	+1.2
4,247,993	-		IAI46_20145	0.72	-0.1
4,247,993	-		IAI46_20145	0.72	-0.4
4,247,993	-		IAI46_20145	0.72	-1.5
4,247,993	-		IAI46_20145	0.72	-0.4
4,248,056	+		IAI46_20145	0.75	-0.2
4,248,057	-		IAI46_20145	0.75	+0.8
4,248,156	-		IAI46_20145	0.79	+1.2
4,248,156	-		IAI46_20145	0.79	-0.1
4,248,185	-		IAI46_20145	0.81	+1.2
4,248,185	-		IAI46_20145	0.81	+0.2
4,248,222	-		IAI46_20145	0.82	-0.1
4,248,230	-		IAI46_20145	0.83	-0.7
4,248,230	-		IAI46_20145	0.83	+0.4
4,248,270	-		IAI46_20145	0.85	-0.1
4,248,361	+		IAI46_20145	0.89	-0.4
4,248,361	+		IAI46_20145	0.89	+0.4
4,248,361	+		IAI46_20145	0.89	+0.9
4,248,362	-		IAI46_20145	0.89	+0.0
4,248,372	-		IAI46_20145	0.89	+0.0
4,248,372	-		IAI46_20145	0.89	+0.0
4,248,373	+		IAI46_20145	0.89	+1.6
4,248,373	+		IAI46_20145	0.89	+0.7
4,248,373	+		IAI46_20145	0.89	+0.5
4,248,373	+		IAI46_20145	0.89	+0.8
4,248,374	-		IAI46_20145	0.89	-0.5
4,248,374	-		IAI46_20145	0.89	+0.9
4,248,374	-		IAI46_20145	0.89	-0.1
4,248,374	-		IAI46_20145	0.89	+1.2
4,248,374	-		IAI46_20145	0.89	-1.1
4,248,415	+				+0.7
4,248,416	-				-1.1
4,248,416	-				+0.0
4,248,455	+				-0.4
4,248,455	+				+0.7
4,248,456	-				+0.8
4,248,472	-				+0.3
4,248,492	-				-0.7
4,248,496	+				+1.2
4,248,545	+				+0.4
4,248,562	+				+0.7
4,248,563	-				+1.3
4,248,584	+				-1.3
4,248,584	+				+0.4
4,248,584	+				+0.9
4,248,585	-				-2.1
4,248,585	-				+0.3
4,248,588	+				-0.3
4,248,588	+				+0.8
4,248,588	+				+0.5
4,248,588	+				-0.4
4,248,588	+				+0.6
4,248,588	+				-0.0
4,248,589	-				-0.3
4,248,589	-				-0.2
4,248,589	-				-0.8
4,248,589	-				+1.0
4,248,590	+				-0.6
4,248,591	-				+1.1
4,248,600	-				+1.0
4,248,600	-				-0.1
4,248,615	+				+0.1
4,248,648	+				+0.8
4,248,666	+				-0.4
4,248,681	+				-1.1
4,248,682	-				+0.2
4,248,690	-				+0.3
4,248,690	-				-0.6
4,248,724	+				-0.3
4,248,724	+				-1.1
4,248,770	+				+0.1
4,248,805	-				+0.3
4,248,925	+		IAI46_20150	0.18	-0.1
4,248,925	+		IAI46_20150	0.18	-0.1
4,248,926	-		IAI46_20150	0.18	+0.6
4,248,941	+		IAI46_20150	0.19	+0.1
4,248,942	-		IAI46_20150	0.19	+0.2
4,249,144	+		IAI46_20150	0.34	-0.0
4,249,145	-		IAI46_20150	0.34	-0.3
4,249,145	-		IAI46_20150	0.34	+0.3
4,249,248	+		IAI46_20150	0.41	-0.3
4,249,248	+		IAI46_20150	0.41	+0.1
4,249,261	-		IAI46_20150	0.42	-0.5
4,249,301	+		IAI46_20150	0.45	+0.1
4,249,302	-		IAI46_20150	0.45	+0.8
4,249,302	-		IAI46_20150	0.45	-0.1
4,249,302	-		IAI46_20150	0.45	+0.7
4,249,306	-		IAI46_20150	0.46	+0.4
4,249,306	-		IAI46_20150	0.46	+0.6
4,249,334	+		IAI46_20150	0.48	-0.8
4,249,335	-		IAI46_20150	0.48	-0.1
4,249,335	-		IAI46_20150	0.48	-0.3
4,249,384	-		IAI46_20150	0.52	-0.2
4,249,414	+		IAI46_20150	0.54	-0.0
4,249,415	-		IAI46_20150	0.54	+0.2
4,249,415	-		IAI46_20150	0.54	+1.2
4,249,462	-		IAI46_20150	0.57	+1.2
4,249,501	-		IAI46_20150	0.60	-0.3
4,249,510	-		IAI46_20150	0.61	+0.1
4,249,510	-		IAI46_20150	0.61	+0.1
4,249,518	-		IAI46_20150	0.61	+0.5
4,249,518	-		IAI46_20150	0.61	+0.3
4,249,518	-		IAI46_20150	0.61	+0.2
4,249,518	-		IAI46_20150	0.61	+0.9
4,249,582	+		IAI46_20150	0.66	+0.1
4,249,593	+		IAI46_20150	0.67	-0.4
4,249,593	+		IAI46_20150	0.67	+0.8
4,249,594	-		IAI46_20150	0.67	-1.0
4,249,594	-		IAI46_20150	0.67	-0.1
4,249,635	+		IAI46_20150	0.70	-0.4
4,249,635	+		IAI46_20150	0.70	+0.0
4,249,635	+		IAI46_20150	0.70	+0.5
4,249,636	-		IAI46_20150	0.70	-0.3
4,249,636	-		IAI46_20150	0.70	+0.3
4,249,646	-		IAI46_20150	0.71	+0.4
4,249,646	-		IAI46_20150	0.71	-0.1
4,249,662	+		IAI46_20150	0.72	-1.1
4,249,662	+		IAI46_20150	0.72	+0.2
4,249,663	-		IAI46_20150	0.72	+0.4
4,249,710	+		IAI46_20150	0.76	+0.3
4,249,719	-		IAI46_20150	0.76	+0.1
4,249,769	+		IAI46_20150	0.80	+0.1
4,249,773	-		IAI46_20150	0.80	+0.3
4,249,870	+		IAI46_20150	0.88	-0.9
4,249,871	-		IAI46_20150	0.88	+0.5
4,249,871	-		IAI46_20150	0.88	+1.0
4,249,871	-		IAI46_20150	0.88	+0.7
4,250,010	+				+1.4
4,250,066	-				-1.7
4,250,177	+				-0.4
4,250,322	-				-0.2
4,250,322	-				+0.0
4,250,419	+				+0.8
4,250,448	-				-1.0
4,250,475	+				+0.8
4,250,476	-				-1.4
4,250,525	-				+0.8
4,250,617	-		IAI46_20155	0.14	+0.8
4,250,617	-		IAI46_20155	0.14	+0.1
4,250,619	-		IAI46_20155	0.14	+1.2
4,250,667	+		IAI46_20155	0.17	-0.4
4,250,667	+		IAI46_20155	0.17	+0.7
4,250,668	-		IAI46_20155	0.17	+0.5
4,250,687	+		IAI46_20155	0.18	+0.3
4,250,776	+		IAI46_20155	0.24	+0.5
4,250,777	-		IAI46_20155	0.24	-0.4
4,250,777	-		IAI46_20155	0.24	-1.1
4,250,862	-		IAI46_20155	0.29	-0.2
4,250,864	+		IAI46_20155	0.30	+1.0
4,250,864	+		IAI46_20155	0.30	+1.0
4,250,865	-		IAI46_20155	0.30	-0.2
4,250,923	+		IAI46_20155	0.33	+0.4
4,250,999	+		IAI46_20155	0.38	+0.0
4,250,999	+		IAI46_20155	0.38	+1.0
4,251,009	-		IAI46_20155	0.39	+0.8
4,251,009	-		IAI46_20155	0.39	+0.1
4,251,009	-		IAI46_20155	0.39	+0.2