Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14075 and IAI46_14080 are separated by 234 nucleotides IAI46_14080 and IAI46_14085 are separated by 75 nucleotides IAI46_14085 and IAI46_14090 are separated by 247 nucleotides
IAI46_14075: IAI46_14075 - SulP family inorganic anion transporter, at 2,987,931 to 2,989,634
_14075
IAI46_14080: IAI46_14080 - septation protein A, at 2,989,869 to 2,990,408
_14080
IAI46_14085: IAI46_14085 - acyl-CoA thioester hydrolase YciA, at 2,990,484 to 2,990,912
_14085
IAI46_14090: IAI46_14090 - LacI family DNA-binding transcriptional regulator, at 2,991,160 to 2,992,185
_14090
Position (kb)
2989
2990
2991 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2988.918 kb on + strand, within IAI46_14075 at 2989.121 kb on - strand, within IAI46_14075 at 2989.165 kb on - strand, within IAI46_14075 at 2989.194 kb on - strand, within IAI46_14075 at 2989.197 kb on - strand, within IAI46_14075 at 2989.225 kb on - strand, within IAI46_14075 at 2989.316 kb on + strand, within IAI46_14075 at 2989.317 kb on - strand, within IAI46_14075 at 2989.317 kb on - strand, within IAI46_14075 at 2989.435 kb on + strand, within IAI46_14075 at 2989.587 kb on + strand at 2989.650 kb on - strand at 2989.652 kb on - strand at 2989.668 kb on - strand at 2989.668 kb on - strand at 2989.677 kb on - strand at 2989.836 kb on + strand at 2990.372 kb on + strand at 2990.449 kb on + strand at 2990.483 kb on + strand at 2990.484 kb on - strand at 2990.549 kb on + strand, within IAI46_14085 at 2990.645 kb on - strand, within IAI46_14085 at 2990.647 kb on + strand, within IAI46_14085 at 2990.653 kb on + strand, within IAI46_14085 at 2990.666 kb on + strand, within IAI46_14085 at 2990.667 kb on - strand, within IAI46_14085 at 2990.704 kb on + strand, within IAI46_14085 at 2990.704 kb on + strand, within IAI46_14085 at 2990.704 kb on + strand, within IAI46_14085 at 2990.705 kb on - strand, within IAI46_14085 at 2990.712 kb on + strand, within IAI46_14085 at 2990.713 kb on - strand, within IAI46_14085 at 2990.744 kb on + strand, within IAI46_14085 at 2990.744 kb on + strand, within IAI46_14085 at 2990.828 kb on + strand, within IAI46_14085 at 2990.833 kb on - strand, within IAI46_14085 at 2991.026 kb on - strand at 2991.095 kb on + strand at 2991.095 kb on + strand at 2991.137 kb on - strand at 2991.149 kb on - strand at 2991.150 kb on + strand at 2991.151 kb on - strand at 2991.151 kb on - strand at 2991.154 kb on + strand at 2991.204 kb on - strand at 2991.212 kb on + strand at 2991.216 kb on + strand at 2991.223 kb on - strand at 2991.229 kb on - strand at 2991.357 kb on + strand, within IAI46_14090
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 2,988,918 + IAI46_14075 0.58 +0.2 2,989,121 - IAI46_14075 0.70 -0.8 2,989,165 - IAI46_14075 0.72 +0.1 2,989,194 - IAI46_14075 0.74 +0.7 2,989,197 - IAI46_14075 0.74 -0.1 2,989,225 - IAI46_14075 0.76 -0.7 2,989,316 + IAI46_14075 0.81 -0.3 2,989,317 - IAI46_14075 0.81 +0.8 2,989,317 - IAI46_14075 0.81 +0.6 2,989,435 + IAI46_14075 0.88 -1.0 2,989,587 + +0.2 2,989,650 - -0.6 2,989,652 - +0.9 2,989,668 - -0.3 2,989,668 - +0.9 2,989,677 - +0.0 2,989,836 + -0.7 2,990,372 + -1.9 2,990,449 + +1.3 2,990,483 + -1.7 2,990,484 - -0.7 2,990,549 + IAI46_14085 0.15 -0.3 2,990,645 - IAI46_14085 0.38 +0.2 2,990,647 + IAI46_14085 0.38 +0.1 2,990,653 + IAI46_14085 0.39 -0.5 2,990,666 + IAI46_14085 0.42 -0.2 2,990,667 - IAI46_14085 0.43 +0.7 2,990,704 + IAI46_14085 0.51 +0.5 2,990,704 + IAI46_14085 0.51 -0.7 2,990,704 + IAI46_14085 0.51 -0.1 2,990,705 - IAI46_14085 0.52 -0.6 2,990,712 + IAI46_14085 0.53 -0.5 2,990,713 - IAI46_14085 0.53 +1.5 2,990,744 + IAI46_14085 0.61 -0.4 2,990,744 + IAI46_14085 0.61 -0.5 2,990,828 + IAI46_14085 0.80 +0.5 2,990,833 - IAI46_14085 0.81 -2.8 2,991,026 - -0.2 2,991,095 + +0.5 2,991,095 + +0.2 2,991,137 - -0.6 2,991,149 - +1.7 2,991,150 + -0.7 2,991,151 - -0.5 2,991,151 - -1.3 2,991,154 + -0.0 2,991,204 - -0.8 2,991,212 + +0.4 2,991,216 + +0.4 2,991,223 - +0.2 2,991,229 - +0.0 2,991,357 + IAI46_14090 0.19 +0.7
Or see this region's nucleotide sequence