Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14035 and IAI46_14040 are separated by 31 nucleotides IAI46_14040 and IAI46_14045 overlap by 1 nucleotides
IAI46_14035: IAI46_14035 - bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF, at 2,980,448 to 2,981,809
_14035
IAI46_14040: IAI46_14040 - tryptophan synthase subunit beta, at 2,981,841 to 2,983,031
_14040
IAI46_14045: IAI46_14045 - tryptophan synthase subunit alpha, at 2,983,031 to 2,983,837
_14045
Position (kb)
2981
2982
2983
2984 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2981.108 kb on + strand, within IAI46_14035 at 2981.166 kb on + strand, within IAI46_14035 at 2981.318 kb on + strand, within IAI46_14035 at 2981.379 kb on + strand, within IAI46_14035 at 2981.471 kb on + strand, within IAI46_14035 at 2981.472 kb on - strand, within IAI46_14035 at 2981.472 kb on - strand, within IAI46_14035 at 2981.474 kb on - strand, within IAI46_14035 at 2981.728 kb on + strand at 2981.807 kb on + strand at 2981.852 kb on + strand at 2981.860 kb on - strand at 2981.883 kb on + strand at 2981.883 kb on + strand at 2981.884 kb on - strand at 2982.057 kb on + strand, within IAI46_14040 at 2982.234 kb on + strand, within IAI46_14040 at 2982.235 kb on - strand, within IAI46_14040 at 2982.378 kb on + strand, within IAI46_14040 at 2982.379 kb on - strand, within IAI46_14040 at 2982.393 kb on + strand, within IAI46_14040 at 2982.393 kb on + strand, within IAI46_14040 at 2982.393 kb on + strand, within IAI46_14040 at 2982.394 kb on - strand, within IAI46_14040 at 2982.394 kb on - strand, within IAI46_14040 at 2982.395 kb on + strand, within IAI46_14040 at 2982.396 kb on - strand, within IAI46_14040 at 2982.396 kb on - strand, within IAI46_14040 at 2982.396 kb on - strand, within IAI46_14040 at 2982.396 kb on - strand, within IAI46_14040 at 2982.555 kb on - strand, within IAI46_14040 at 2982.780 kb on + strand, within IAI46_14040 at 2982.781 kb on - strand, within IAI46_14040 at 2982.807 kb on + strand, within IAI46_14040 at 2982.815 kb on + strand, within IAI46_14040 at 2982.816 kb on - strand, within IAI46_14040 at 2982.816 kb on - strand, within IAI46_14040 at 2982.988 kb on + strand at 2982.989 kb on - strand at 2982.989 kb on - strand at 2982.989 kb on - strand at 2982.992 kb on + strand at 2982.993 kb on - strand at 2983.335 kb on - strand, within IAI46_14045 at 2983.335 kb on - strand, within IAI46_14045 at 2983.335 kb on - strand, within IAI46_14045 at 2983.347 kb on + strand, within IAI46_14045 at 2983.348 kb on - strand, within IAI46_14045 at 2983.427 kb on + strand, within IAI46_14045 at 2983.487 kb on - strand, within IAI46_14045 at 2983.553 kb on + strand, within IAI46_14045 at 2983.835 kb on + strand at 2983.955 kb on - strand at 2983.997 kb on + strand at 2983.998 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 2,981,108 + IAI46_14035 0.48 +0.8 2,981,166 + IAI46_14035 0.53 +0.5 2,981,318 + IAI46_14035 0.64 +0.3 2,981,379 + IAI46_14035 0.68 -0.3 2,981,471 + IAI46_14035 0.75 +0.3 2,981,472 - IAI46_14035 0.75 -1.4 2,981,472 - IAI46_14035 0.75 -1.5 2,981,474 - IAI46_14035 0.75 +1.3 2,981,728 + +0.1 2,981,807 + +0.3 2,981,852 + -0.1 2,981,860 - -0.9 2,981,883 + +1.1 2,981,883 + +0.1 2,981,884 - +1.0 2,982,057 + IAI46_14040 0.18 +0.0 2,982,234 + IAI46_14040 0.33 -0.7 2,982,235 - IAI46_14040 0.33 +0.2 2,982,378 + IAI46_14040 0.45 -3.8 2,982,379 - IAI46_14040 0.45 +0.0 2,982,393 + IAI46_14040 0.46 +0.2 2,982,393 + IAI46_14040 0.46 +0.6 2,982,393 + IAI46_14040 0.46 +0.0 2,982,394 - IAI46_14040 0.46 +0.4 2,982,394 - IAI46_14040 0.46 -1.8 2,982,395 + IAI46_14040 0.47 -0.5 2,982,396 - IAI46_14040 0.47 +0.0 2,982,396 - IAI46_14040 0.47 -2.4 2,982,396 - IAI46_14040 0.47 -0.3 2,982,396 - IAI46_14040 0.47 +0.0 2,982,555 - IAI46_14040 0.60 -0.1 2,982,780 + IAI46_14040 0.79 -1.1 2,982,781 - IAI46_14040 0.79 +0.4 2,982,807 + IAI46_14040 0.81 -0.1 2,982,815 + IAI46_14040 0.82 -1.0 2,982,816 - IAI46_14040 0.82 -1.0 2,982,816 - IAI46_14040 0.82 +0.5 2,982,988 + -1.7 2,982,989 - -0.5 2,982,989 - +1.1 2,982,989 - -0.2 2,982,992 + -1.0 2,982,993 - +0.3 2,983,335 - IAI46_14045 0.38 +0.3 2,983,335 - IAI46_14045 0.38 +0.6 2,983,335 - IAI46_14045 0.38 -0.9 2,983,347 + IAI46_14045 0.39 -1.5 2,983,348 - IAI46_14045 0.39 -0.6 2,983,427 + IAI46_14045 0.49 +0.8 2,983,487 - IAI46_14045 0.57 +0.7 2,983,553 + IAI46_14045 0.65 -0.6 2,983,835 + +0.5 2,983,955 - -0.5 2,983,997 + +1.3 2,983,998 - +0.2
Or see this region's nucleotide sequence