Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12455 and IAI46_12460 overlap by 4 nucleotides IAI46_12460 and IAI46_12465 are separated by 42 nucleotides IAI46_12465 and IAI46_12470 are separated by 41 nucleotides
IAI46_12455: IAI46_12455 - FCD domain-containing protein, at 2,646,785 to 2,647,525
_12455
IAI46_12460: IAI46_12460 - fumarylacetoacetate hydrolase family protein, at 2,647,522 to 2,648,367
_12460
IAI46_12465: IAI46_12465 - aldehyde dehydrogenase family protein, at 2,648,410 to 2,649,897
_12465
IAI46_12470: IAI46_12470 - VOC family protein, at 2,649,939 to 2,650,937
_12470
Position (kb)
2648
2649
2650 Strain fitness (log2 ratio)
-2
-1
0
1 at 2647.443 kb on - strand, within IAI46_12455 at 2647.488 kb on + strand at 2647.654 kb on - strand, within IAI46_12460 at 2647.891 kb on + strand, within IAI46_12460 at 2647.982 kb on - strand, within IAI46_12460 at 2648.712 kb on - strand, within IAI46_12465 at 2648.770 kb on - strand, within IAI46_12465 at 2648.770 kb on - strand, within IAI46_12465 at 2648.865 kb on + strand, within IAI46_12465 at 2648.865 kb on + strand, within IAI46_12465 at 2648.865 kb on + strand, within IAI46_12465 at 2648.910 kb on + strand, within IAI46_12465 at 2649.282 kb on + strand, within IAI46_12465 at 2649.337 kb on + strand, within IAI46_12465 at 2649.510 kb on - strand, within IAI46_12465 at 2649.547 kb on + strand, within IAI46_12465 at 2649.547 kb on + strand, within IAI46_12465 at 2649.762 kb on - strand at 2649.862 kb on + strand at 2649.963 kb on + strand at 2650.042 kb on - strand, within IAI46_12470 at 2650.274 kb on + strand, within IAI46_12470 at 2650.315 kb on + strand, within IAI46_12470 at 2650.316 kb on - strand, within IAI46_12470 at 2650.316 kb on - strand, within IAI46_12470 at 2650.476 kb on + strand, within IAI46_12470 at 2650.476 kb on + strand, within IAI46_12470 at 2650.476 kb on + strand, within IAI46_12470 at 2650.582 kb on - strand, within IAI46_12470 at 2650.583 kb on + strand, within IAI46_12470 at 2650.696 kb on - strand, within IAI46_12470 at 2650.728 kb on - strand, within IAI46_12470 at 2650.810 kb on + strand, within IAI46_12470 at 2650.810 kb on + strand, within IAI46_12470
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 2,647,443 - IAI46_12455 0.89 -0.7 2,647,488 + +0.4 2,647,654 - IAI46_12460 0.16 +0.0 2,647,891 + IAI46_12460 0.44 +0.7 2,647,982 - IAI46_12460 0.54 +0.1 2,648,712 - IAI46_12465 0.20 -0.4 2,648,770 - IAI46_12465 0.24 -0.5 2,648,770 - IAI46_12465 0.24 +0.3 2,648,865 + IAI46_12465 0.31 -0.4 2,648,865 + IAI46_12465 0.31 +0.9 2,648,865 + IAI46_12465 0.31 +0.7 2,648,910 + IAI46_12465 0.34 +1.3 2,649,282 + IAI46_12465 0.59 +0.7 2,649,337 + IAI46_12465 0.62 +0.1 2,649,510 - IAI46_12465 0.74 -0.2 2,649,547 + IAI46_12465 0.76 +0.3 2,649,547 + IAI46_12465 0.76 -0.1 2,649,762 - -1.7 2,649,862 + +0.3 2,649,963 + -0.9 2,650,042 - IAI46_12470 0.10 +0.4 2,650,274 + IAI46_12470 0.34 +0.3 2,650,315 + IAI46_12470 0.38 -0.8 2,650,316 - IAI46_12470 0.38 +0.1 2,650,316 - IAI46_12470 0.38 -0.5 2,650,476 + IAI46_12470 0.54 -0.8 2,650,476 + IAI46_12470 0.54 -1.5 2,650,476 + IAI46_12470 0.54 -1.7 2,650,582 - IAI46_12470 0.64 +0.9 2,650,583 + IAI46_12470 0.64 -2.1 2,650,696 - IAI46_12470 0.76 -0.9 2,650,728 - IAI46_12470 0.79 +0.3 2,650,810 + IAI46_12470 0.87 -0.8 2,650,810 + IAI46_12470 0.87 -0.7
Or see this region's nucleotide sequence