Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12260 and IAI46_12265 are separated by 146 nucleotides IAI46_12265 and IAI46_12270 are separated by 27 nucleotides IAI46_12270 and IAI46_12275 are separated by 55 nucleotides
IAI46_12260: IAI46_12260 - LysR family transcriptional regulator, at 2,601,079 to 2,602,017
_12260
IAI46_12265: IAI46_12265 - amidinotransferase, at 2,602,164 to 2,602,925
_12265
IAI46_12270: IAI46_12270 - ABC transporter substrate-binding protein, at 2,602,953 to 2,603,726
_12270
IAI46_12275: IAI46_12275 - ABC transporter permease subunit, at 2,603,782 to 2,604,471
_12275
Position (kb)
2602
2603 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2601.267 kb on + strand, within IAI46_12260 at 2601.268 kb on - strand, within IAI46_12260 at 2601.383 kb on + strand, within IAI46_12260 at 2601.422 kb on + strand, within IAI46_12260 at 2601.614 kb on + strand, within IAI46_12260 at 2601.617 kb on + strand, within IAI46_12260 at 2601.682 kb on - strand, within IAI46_12260 at 2601.688 kb on + strand, within IAI46_12260 at 2601.931 kb on + strand at 2601.932 kb on - strand at 2601.952 kb on - strand at 2601.988 kb on - strand at 2602.025 kb on + strand at 2602.055 kb on - strand at 2602.057 kb on - strand at 2602.057 kb on - strand at 2602.069 kb on + strand at 2602.172 kb on + strand at 2602.224 kb on - strand at 2602.278 kb on + strand, within IAI46_12265 at 2602.278 kb on + strand, within IAI46_12265 at 2602.278 kb on + strand, within IAI46_12265 at 2602.307 kb on - strand, within IAI46_12265 at 2602.479 kb on - strand, within IAI46_12265 at 2602.479 kb on - strand, within IAI46_12265 at 2602.680 kb on - strand, within IAI46_12265 at 2602.761 kb on + strand, within IAI46_12265 at 2602.773 kb on - strand, within IAI46_12265 at 2602.790 kb on + strand, within IAI46_12265 at 2602.790 kb on + strand, within IAI46_12265 at 2602.791 kb on - strand, within IAI46_12265 at 2603.103 kb on - strand, within IAI46_12270 at 2603.444 kb on + strand, within IAI46_12270 at 2603.477 kb on + strand, within IAI46_12270 at 2603.498 kb on + strand, within IAI46_12270 at 2603.520 kb on - strand, within IAI46_12270 at 2603.676 kb on + strand at 2603.716 kb on - strand at 2603.724 kb on + strand at 2603.767 kb on + strand at 2603.767 kb on + strand at 2603.794 kb on + strand at 2603.794 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 2,601,267 + IAI46_12260 0.20 +0.7 2,601,268 - IAI46_12260 0.20 -1.0 2,601,383 + IAI46_12260 0.32 +1.0 2,601,422 + IAI46_12260 0.37 -0.4 2,601,614 + IAI46_12260 0.57 -1.1 2,601,617 + IAI46_12260 0.57 +0.9 2,601,682 - IAI46_12260 0.64 +0.2 2,601,688 + IAI46_12260 0.65 -2.9 2,601,931 + +0.6 2,601,932 - -1.7 2,601,952 - +0.7 2,601,988 - +0.5 2,602,025 + +1.3 2,602,055 - +0.5 2,602,057 - +2.3 2,602,057 - -0.6 2,602,069 + -1.4 2,602,172 + +0.9 2,602,224 - +1.4 2,602,278 + IAI46_12265 0.15 +0.1 2,602,278 + IAI46_12265 0.15 +0.0 2,602,278 + IAI46_12265 0.15 +0.7 2,602,307 - IAI46_12265 0.19 +0.3 2,602,479 - IAI46_12265 0.41 -0.0 2,602,479 - IAI46_12265 0.41 -1.8 2,602,680 - IAI46_12265 0.68 -0.7 2,602,761 + IAI46_12265 0.78 -0.6 2,602,773 - IAI46_12265 0.80 +1.1 2,602,790 + IAI46_12265 0.82 -0.2 2,602,790 + IAI46_12265 0.82 -0.5 2,602,791 - IAI46_12265 0.82 -0.7 2,603,103 - IAI46_12270 0.19 -0.1 2,603,444 + IAI46_12270 0.63 -0.1 2,603,477 + IAI46_12270 0.68 -0.2 2,603,498 + IAI46_12270 0.70 +1.6 2,603,520 - IAI46_12270 0.73 +0.6 2,603,676 + +0.4 2,603,716 - -0.7 2,603,724 + -0.4 2,603,767 + -0.6 2,603,767 + +0.2 2,603,794 + -0.4 2,603,794 + -0.1
Or see this region's nucleotide sequence