Experiment: Cobalt chloride 80 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_07675 and IAI46_07680 are separated by 3 nucleotides IAI46_07680 and IAI46_07685 are separated by 150 nucleotides IAI46_07685 and IAI46_07690 are separated by 10 nucleotides
IAI46_07675: IAI46_07675 - HAMP domain-containing histidine kinase, at 1,620,802 to 1,622,268
_07675
IAI46_07680: IAI46_07680 - response regulator transcription factor, at 1,622,272 to 1,622,985
_07680
IAI46_07685: IAI46_07685 - cytochrome b/b6 domain-containing protein, at 1,623,136 to 1,623,747
_07685
IAI46_07690: IAI46_07690 - molybdopterin-dependent oxidoreductase, at 1,623,758 to 1,624,546
_07690
Position (kb)
1622
1623 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1621.349 kb on + strand, within IAI46_07675 at 1621.407 kb on - strand, within IAI46_07675 at 1621.449 kb on + strand, within IAI46_07675 at 1621.458 kb on + strand, within IAI46_07675 at 1621.504 kb on + strand, within IAI46_07675 at 1621.592 kb on + strand, within IAI46_07675 at 1621.593 kb on - strand, within IAI46_07675 at 1621.673 kb on + strand, within IAI46_07675 at 1621.673 kb on + strand, within IAI46_07675 at 1621.674 kb on - strand, within IAI46_07675 at 1621.752 kb on + strand, within IAI46_07675 at 1621.753 kb on - strand, within IAI46_07675 at 1621.781 kb on + strand, within IAI46_07675 at 1621.782 kb on - strand, within IAI46_07675 at 1621.805 kb on + strand, within IAI46_07675 at 1621.811 kb on + strand, within IAI46_07675 at 1621.987 kb on + strand, within IAI46_07675 at 1622.012 kb on + strand, within IAI46_07675 at 1622.160 kb on + strand at 1622.162 kb on + strand at 1622.163 kb on - strand at 1622.169 kb on + strand at 1622.382 kb on + strand, within IAI46_07680 at 1622.399 kb on + strand, within IAI46_07680 at 1622.534 kb on - strand, within IAI46_07680 at 1622.534 kb on - strand, within IAI46_07680 at 1622.637 kb on + strand, within IAI46_07680 at 1622.719 kb on + strand, within IAI46_07680 at 1622.719 kb on + strand, within IAI46_07680 at 1623.011 kb on + strand at 1623.021 kb on + strand at 1623.022 kb on - strand at 1623.044 kb on + strand at 1623.150 kb on + strand at 1623.151 kb on - strand at 1623.151 kb on - strand at 1623.254 kb on - strand, within IAI46_07685 at 1623.254 kb on - strand, within IAI46_07685 at 1623.377 kb on - strand, within IAI46_07685 at 1623.486 kb on + strand, within IAI46_07685 at 1623.502 kb on + strand, within IAI46_07685 at 1623.502 kb on + strand, within IAI46_07685 at 1623.512 kb on + strand, within IAI46_07685 at 1623.512 kb on + strand, within IAI46_07685 at 1623.512 kb on + strand, within IAI46_07685 at 1623.526 kb on + strand, within IAI46_07685 at 1623.527 kb on - strand, within IAI46_07685 at 1623.527 kb on - strand, within IAI46_07685 at 1623.527 kb on - strand, within IAI46_07685 at 1623.551 kb on + strand, within IAI46_07685 at 1623.563 kb on + strand, within IAI46_07685 at 1623.564 kb on - strand, within IAI46_07685 at 1623.640 kb on + strand, within IAI46_07685 at 1623.640 kb on + strand, within IAI46_07685 at 1623.640 kb on + strand, within IAI46_07685 at 1623.641 kb on - strand, within IAI46_07685 at 1623.680 kb on + strand, within IAI46_07685 at 1623.681 kb on - strand, within IAI46_07685 at 1623.683 kb on + strand, within IAI46_07685 at 1623.683 kb on + strand, within IAI46_07685 at 1623.684 kb on - strand, within IAI46_07685 at 1623.684 kb on - strand, within IAI46_07685 at 1623.769 kb on + strand at 1623.778 kb on + strand at 1623.778 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 80 uM, aerobic remove 1,621,349 + IAI46_07675 0.37 +0.3 1,621,407 - IAI46_07675 0.41 +1.4 1,621,449 + IAI46_07675 0.44 +0.4 1,621,458 + IAI46_07675 0.45 +0.2 1,621,504 + IAI46_07675 0.48 +0.3 1,621,592 + IAI46_07675 0.54 -0.1 1,621,593 - IAI46_07675 0.54 +0.5 1,621,673 + IAI46_07675 0.59 -0.2 1,621,673 + IAI46_07675 0.59 +2.3 1,621,674 - IAI46_07675 0.59 +1.6 1,621,752 + IAI46_07675 0.65 -0.4 1,621,753 - IAI46_07675 0.65 +0.2 1,621,781 + IAI46_07675 0.67 +0.0 1,621,782 - IAI46_07675 0.67 +0.2 1,621,805 + IAI46_07675 0.68 +0.4 1,621,811 + IAI46_07675 0.69 -0.4 1,621,987 + IAI46_07675 0.81 +0.0 1,622,012 + IAI46_07675 0.82 +1.0 1,622,160 + +0.5 1,622,162 + -0.1 1,622,163 - +0.5 1,622,169 + -0.6 1,622,382 + IAI46_07680 0.15 -0.2 1,622,399 + IAI46_07680 0.18 +0.8 1,622,534 - IAI46_07680 0.37 +0.5 1,622,534 - IAI46_07680 0.37 +0.7 1,622,637 + IAI46_07680 0.51 -0.3 1,622,719 + IAI46_07680 0.63 -1.1 1,622,719 + IAI46_07680 0.63 +1.0 1,623,011 + -0.0 1,623,021 + +0.0 1,623,022 - +0.2 1,623,044 + +0.5 1,623,150 + -0.0 1,623,151 - -0.4 1,623,151 - -0.5 1,623,254 - IAI46_07685 0.19 -0.1 1,623,254 - IAI46_07685 0.19 +0.9 1,623,377 - IAI46_07685 0.39 -0.1 1,623,486 + IAI46_07685 0.57 +0.1 1,623,502 + IAI46_07685 0.60 -1.1 1,623,502 + IAI46_07685 0.60 +0.2 1,623,512 + IAI46_07685 0.61 +0.1 1,623,512 + IAI46_07685 0.61 -1.0 1,623,512 + IAI46_07685 0.61 +0.1 1,623,526 + IAI46_07685 0.64 +1.4 1,623,527 - IAI46_07685 0.64 +0.6 1,623,527 - IAI46_07685 0.64 -0.1 1,623,527 - IAI46_07685 0.64 -0.7 1,623,551 + IAI46_07685 0.68 +1.2 1,623,563 + IAI46_07685 0.70 +0.0 1,623,564 - IAI46_07685 0.70 +1.7 1,623,640 + IAI46_07685 0.82 +0.9 1,623,640 + IAI46_07685 0.82 -0.8 1,623,640 + IAI46_07685 0.82 +0.4 1,623,641 - IAI46_07685 0.83 +0.7 1,623,680 + IAI46_07685 0.89 +0.8 1,623,681 - IAI46_07685 0.89 -0.1 1,623,683 + IAI46_07685 0.89 -0.4 1,623,683 + IAI46_07685 0.89 +0.1 1,623,684 - IAI46_07685 0.90 -1.3 1,623,684 - IAI46_07685 0.90 +1.5 1,623,769 + +0.5 1,623,778 + +0.4 1,623,778 + -2.0
Or see this region's nucleotide sequence